EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008450 (Gene tree)
Gene ID: 103474181
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4492 bases
Position: chrLG13:1344571-1349062
Accession: 103474181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012436	Methyltransf_8	PF05148.15	1.9e-64	1	1
ENSPREP00000012441	Methyltransf_8	PF05148.15	2.5e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012570	-	1500	-	ENSPREP00000012436	496 (aa)	-	-
ENSPRET00000012574	-	2433	XM_017308074	ENSPREP00000012441	484 (aa)	XP_017163563	UPI0007EA19FA

Gene Model

Click here to download ENSPREG00000008450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008450	rrp8	99	54.691	ENSAPOG00000010806	rrp8	86	54.183	Acanthochromis_polyacanthus
ENSPREG00000008450	rrp8	99	54.691	ENSAPOG00000008509	-	88	54.183	Acanthochromis_polyacanthus
ENSPREG00000008450	rrp8	99	54.691	ENSAPOG00000010798	-	86	54.183	Acanthochromis_polyacanthus
ENSPREG00000008450	rrp8	92	52.444	ENSACIG00000019896	rrp8	86	51.101	Amphilophus_citrinellus
ENSPREG00000008450	rrp8	99	55.268	ENSAOCG00000008785	rrp8	88	54.960	Amphiprion_ocellaris
ENSPREG00000008450	rrp8	99	55.666	ENSAPEG00000008416	rrp8	88	55.357	Amphiprion_percula
ENSPREG00000008450	rrp8	99	53.150	ENSATEG00000014110	rrp8	92	53.162	Anabas_testudineus
ENSPREG00000008450	rrp8	100	52.016	ENSACLG00000002746	rrp8	87	52.857	Astatotilapia_calliptera
ENSPREG00000008450	rrp8	99	43.089	ENSAMXG00000005164	rrp8	86	42.886	Astyanax_mexicanus
ENSPREG00000008450	rrp8	68	42.515	ENSCSAVG00000006435	-	71	42.216	Ciona_savignyi
ENSPREG00000008450	rrp8	66	56.923	ENSCSEG00000007330	rrp8	83	56.923	Cynoglossus_semilaevis
ENSPREG00000008450	rrp8	100	62.475	ENSCVAG00000012032	rrp8	88	63.065	Cyprinodon_variegatus
ENSPREG00000008450	rrp8	99	41.449	ENSDARG00000071652	rrp8	87	41.400	Danio_rerio
ENSPREG00000008450	rrp8	99	40.449	ENSELUG00000008665	rrp8	88	41.760	Esox_lucius
ENSPREG00000008450	rrp8	100	88.041	ENSGAFG00000012331	rrp8	100	87.010	Gambusia_affinis
ENSPREG00000008450	rrp8	68	56.667	ENSGACG00000011343	rrp8	74	56.667	Gasterosteus_aculeatus
ENSPREG00000008450	rrp8	100	52.218	ENSHBUG00000017131	rrp8	87	52.834	Haplochromis_burtoni
ENSPREG00000008450	rrp8	99	48.875	ENSHCOG00000001293	rrp8	86	49.184	Hippocampus_comes
ENSPREG00000008450	rrp8	99	40.800	ENSIPUG00000017733	rrp8	87	40.283	Ictalurus_punctatus
ENSPREG00000008450	rrp8	99	58.800	ENSKMAG00000009229	rrp8	87	59.200	Kryptolebias_marmoratus
ENSPREG00000008450	rrp8	64	55.937	ENSLBEG00000019937	rrp8	82	56.667	Labrus_bergylta
ENSPREG00000008450	rrp8	99	42.570	ENSLOCG00000009591	rrp8	86	41.331	Lepisosteus_oculatus
ENSPREG00000008450	rrp8	99	53.937	ENSMAMG00000009679	rrp8	88	53.937	Mastacembelus_armatus
ENSPREG00000008450	rrp8	100	52.218	ENSMZEG00005008926	rrp8	87	52.834	Maylandia_zebra
ENSPREG00000008450	rrp8	92	53.664	ENSMMOG00000015709	rrp8	86	53.233	Mola_mola
ENSPREG00000008450	rrp8	99	52.165	ENSMALG00000015984	rrp8	88	51.969	Monopterus_albus
ENSPREG00000008450	rrp8	70	53.602	ENSNBRG00000023416	rrp8	81	53.890	Neolamprologus_brichardi
ENSPREG00000008450	rrp8	84	48.558	ENSONIG00000016861	rrp8	96	49.400	Oreochromis_niloticus
ENSPREG00000008450	rrp8	99	52.323	ENSORLG00000004175	rrp8	86	52.525	Oryzias_latipes
ENSPREG00000008450	rrp8	99	53.427	ENSORLG00020011413	rrp8	86	51.479	Oryzias_latipes_hni
ENSPREG00000008450	rrp8	99	53.414	ENSORLG00015015410	rrp8	86	52.823	Oryzias_latipes_hsok
ENSPREG00000008450	rrp8	99	52.104	ENSOMEG00000003161	rrp8	87	51.807	Oryzias_melastigma
ENSPREG00000008450	rrp8	99	43.378	ENSPKIG00000024217	rrp8	88	42.690	Paramormyrops_kingsleyae
ENSPREG00000008450	rrp8	100	92.562	ENSPFOG00000007308	rrp8	87	92.562	Poecilia_formosa
ENSPREG00000008450	rrp8	100	92.355	ENSPLAG00000011349	rrp8	87	92.355	Poecilia_latipinna
ENSPREG00000008450	rrp8	100	91.736	ENSPMEG00000009888	rrp8	87	91.736	Poecilia_mexicana
ENSPREG00000008450	rrp8	100	51.626	ENSPNYG00000002878	rrp8	87	52.245	Pundamilia_nyererei
ENSPREG00000008450	rrp8	99	41.211	ENSSFOG00015003917	rrp8	87	41.199	Scleropages_formosus
ENSPREG00000008450	rrp8	100	54.767	ENSSMAG00000004859	rrp8	87	54.767	Scophthalmus_maximus
ENSPREG00000008450	rrp8	99	55.512	ENSSDUG00000010477	rrp8	88	55.709	Seriola_dumerili
ENSPREG00000008450	rrp8	99	54.941	ENSSLDG00000000521	rrp8	87	54.941	Seriola_lalandi_dorsalis
ENSPREG00000008450	rrp8	64	57.669	ENSSPAG00000006664	rrp8	82	58.333	Stegastes_partitus
ENSPREG00000008450	rrp8	99	49.194	ENSTRUG00000021812	rrp8	87	49.091	Takifugu_rubripes
ENSPREG00000008450	rrp8	66	86.916	ENSXCOG00000006156	rrp8	82	86.916	Xiphophorus_couchianus
ENSPREG00000008450	rrp8	100	87.216	ENSXMAG00000005011	rrp8	87	86.598	Xiphophorus_maculatus