EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008456 (Gene tree)
Gene ID: 103467135
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 42644 bases
Position: chrLG1:19736968-19779611
Accession: 103467135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012499	RRM_1	PF00076.22	7.8e-39	1	3
ENSPREP00000012499	RRM_1	PF00076.22	7.8e-39	2	3
ENSPREP00000012499	RRM_1	PF00076.22	7.8e-39	3	3
ENSPREP00000012484	RRM_1	PF00076.22	9e-39	1	3
ENSPREP00000012484	RRM_1	PF00076.22	9e-39	2	3
ENSPREP00000012484	RRM_1	PF00076.22	9e-39	3	3
ENSPREP00000012470	RRM_1	PF00076.22	1.5e-38	1	3
ENSPREP00000012470	RRM_1	PF00076.22	1.5e-38	2	3
ENSPREP00000012470	RRM_1	PF00076.22	1.5e-38	3	3
ENSPREP00000012460	RRM_1	PF00076.22	1.6e-38	1	3
ENSPREP00000012460	RRM_1	PF00076.22	1.6e-38	2	3
ENSPREP00000012460	RRM_1	PF00076.22	1.6e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012633	-	1563	-	ENSPREP00000012499	520 (aa)	-	-
ENSPRET00000012593	-	6739	XM_008413230	ENSPREP00000012460	619 (aa)	XP_008411452	UPI0004A26C28
ENSPRET00000012617	-	1835	XM_008413315	ENSPREP00000012484	541 (aa)	XP_008411537	UPI0004A435E4
ENSPRET00000012603	-	2042	XM_008413288	ENSPREP00000012470	610 (aa)	XP_008411510	UPI0004A3CC87

Gene Model

Click here to download ENSPREG00000008456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008456	rbm47	58	70.627	ENSPREG00000016298	a1cf	87	52.897
ENSPREG00000008456	rbm47	59	52.396	ENSPREG00000020979	syncripl	72	47.174
ENSPREG00000008456	rbm47	55	68.990	ENSPREG00000014464	rbm46	65	67.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008456	rbm47	100	80.749	ENSG00000163694	RBM47	100	85.253	Homo_sapiens
ENSPREG00000008456	rbm47	100	93.316	ENSAPOG00000011062	rbm47	100	93.316	Acanthochromis_polyacanthus
ENSPREG00000008456	rbm47	100	80.533	ENSAMEG00000009672	RBM47	96	79.483	Ailuropoda_melanoleuca
ENSPREG00000008456	rbm47	100	92.162	ENSACIG00000011531	rbm47	97	90.451	Amphilophus_citrinellus
ENSPREG00000008456	rbm47	100	93.573	ENSAOCG00000022245	rbm47	100	93.573	Amphiprion_ocellaris
ENSPREG00000008456	rbm47	100	93.573	ENSAPEG00000018304	rbm47	100	93.573	Amphiprion_percula
ENSPREG00000008456	rbm47	100	91.774	ENSATEG00000018400	rbm47	100	89.661	Anabas_testudineus
ENSPREG00000008456	rbm47	100	84.392	ENSAPLG00000013974	RBM47	96	78.720	Anas_platyrhynchos
ENSPREG00000008456	rbm47	100	81.432	ENSACAG00000011833	RBM47	97	78.694	Anolis_carolinensis
ENSPREG00000008456	rbm47	100	82.447	ENSANAG00000029440	RBM47	96	87.042	Aotus_nancymaae
ENSPREG00000008456	rbm47	100	90.488	ENSACLG00000016902	rbm47	100	90.680	Astatotilapia_calliptera
ENSPREG00000008456	rbm47	97	90.141	ENSAMXG00000021794	rbm47	100	81.524	Astyanax_mexicanus
ENSPREG00000008456	rbm47	100	82.447	ENSBTAG00000002356	RBM47	96	80.243	Bos_taurus
ENSPREG00000008456	rbm47	97	85.634	ENSCJAG00000019385	RBM47	96	87.042	Callithrix_jacchus
ENSPREG00000008456	rbm47	97	84.703	ENSCAFG00000015898	RBM47	96	79.652	Canis_familiaris
ENSPREG00000008456	rbm47	81	84.419	ENSCAFG00020010558	RBM47	89	86.119	Canis_lupus_dingo
ENSPREG00000008456	rbm47	100	82.181	ENSCHIG00000026214	RBM47	96	80.069	Capra_hircus
ENSPREG00000008456	rbm47	84	86.099	ENSTSYG00000033612	RBM47	93	84.956	Carlito_syrichta
ENSPREG00000008456	rbm47	100	74.332	ENSCAPG00000008426	RBM47	100	72.564	Cavia_aperea
ENSPREG00000008456	rbm47	100	81.600	ENSCPOG00000014100	RBM47	100	80.818	Cavia_porcellus
ENSPREG00000008456	rbm47	100	83.511	ENSCCAG00000030129	-	96	86.761	Cebus_capucinus
ENSPREG00000008456	rbm47	99	54.959	ENSCCAG00000024397	-	95	56.424	Cebus_capucinus
ENSPREG00000008456	rbm47	100	80.749	ENSCATG00000042064	RBM47	96	87.042	Cercocebus_atys
ENSPREG00000008456	rbm47	100	81.067	ENSCLAG00000001684	RBM47	100	82.667	Chinchilla_lanigera
ENSPREG00000008456	rbm47	100	80.749	ENSCSAG00000017060	RBM47	96	80.138	Chlorocebus_sabaeus
ENSPREG00000008456	rbm47	74	88.197	ENSCHOG00000011731	RBM47	84	80.095	Choloepus_hoffmanni
ENSPREG00000008456	rbm47	100	85.638	ENSCPBG00000013831	RBM47	96	81.552	Chrysemys_picta_bellii
ENSPREG00000008456	rbm47	100	81.915	ENSCANG00000019997	RBM47	96	86.761	Colobus_angolensis_palliatus
ENSPREG00000008456	rbm47	100	70.888	ENSCGRG00001020102	-	96	81.356	Cricetulus_griseus_chok1gshd
ENSPREG00000008456	rbm47	100	81.217	ENSCGRG00001000623	-	96	86.197	Cricetulus_griseus_chok1gshd
ENSPREG00000008456	rbm47	100	73.052	ENSCGRG00000007762	-	100	82.278	Cricetulus_griseus_crigri
ENSPREG00000008456	rbm47	99	71.538	ENSCGRG00000014760	-	96	81.356	Cricetulus_griseus_crigri
ENSPREG00000008456	rbm47	100	90.860	ENSCSEG00000004545	rbm47	97	87.889	Cynoglossus_semilaevis
ENSPREG00000008456	rbm47	100	96.401	ENSCVAG00000020144	rbm47	100	96.401	Cyprinodon_variegatus
ENSPREG00000008456	rbm47	100	86.445	ENSDARG00000061985	rbm47	100	82.573	Danio_rerio
ENSPREG00000008456	rbm47	100	82.447	ENSDNOG00000046854	RBM47	96	79.549	Dasypus_novemcinctus
ENSPREG00000008456	rbm47	100	81.266	ENSDORG00000010144	Rbm47	100	76.214	Dipodomys_ordii
ENSPREG00000008456	rbm47	97	82.913	ENSETEG00000009194	RBM47	100	76.299	Echinops_telfairi
ENSPREG00000008456	rbm47	100	53.976	ENSEBUG00000011912	rbm47	96	59.622	Eptatretus_burgeri
ENSPREG00000008456	rbm47	100	81.649	ENSEASG00005008443	RBM47	96	79.723	Equus_asinus_asinus
ENSPREG00000008456	rbm47	100	81.649	ENSECAG00000004400	RBM47	96	79.723	Equus_caballus
ENSPREG00000008456	rbm47	70	88.038	ENSEEUG00000001194	RBM47	72	90.431	Erinaceus_europaeus
ENSPREG00000008456	rbm47	100	87.657	ENSELUG00000006148	rbm47	100	86.902	Esox_lucius
ENSPREG00000008456	rbm47	100	80.533	ENSFCAG00000012399	RBM47	96	80.382	Felis_catus
ENSPREG00000008456	rbm47	100	84.043	ENSFALG00000002861	RBM47	96	81.629	Ficedula_albicollis
ENSPREG00000008456	rbm47	100	80.533	ENSFDAG00000016326	RBM47	100	78.261	Fukomys_damarensis
ENSPREG00000008456	rbm47	100	97.011	ENSFHEG00000007938	rbm47	100	92.892	Fundulus_heteroclitus
ENSPREG00000008456	rbm47	100	87.817	ENSGMOG00000014802	rbm47	100	84.848	Gadus_morhua
ENSPREG00000008456	rbm47	71	84.574	ENSGALG00000014267	RBM47	99	84.574	Gallus_gallus
ENSPREG00000008456	rbm47	71	99.185	ENSGAFG00000020571	rbm47	98	99.185	Gambusia_affinis
ENSPREG00000008456	rbm47	100	89.460	ENSGACG00000016223	rbm47	100	89.460	Gasterosteus_aculeatus
ENSPREG00000008456	rbm47	100	85.372	ENSGAGG00000020051	RBM47	96	81.552	Gopherus_agassizii
ENSPREG00000008456	rbm47	100	80.749	ENSGGOG00000001367	RBM47	96	87.042	Gorilla_gorilla
ENSPREG00000008456	rbm47	100	90.488	ENSHBUG00000003520	rbm47	100	90.488	Haplochromis_burtoni
ENSPREG00000008456	rbm47	100	60.531	ENSHGLG00000016914	RBM47	100	79.747	Heterocephalus_glaber_female
ENSPREG00000008456	rbm47	100	80.105	ENSHGLG00100014028	-	100	79.747	Heterocephalus_glaber_male
ENSPREG00000008456	rbm47	100	67.700	ENSHGLG00100003071	-	100	67.374	Heterocephalus_glaber_male
ENSPREG00000008456	rbm47	99	91.003	ENSHCOG00000002074	rbm47	99	91.003	Hippocampus_comes
ENSPREG00000008456	rbm47	100	89.160	ENSIPUG00000004743	rbm47	100	82.439	Ictalurus_punctatus
ENSPREG00000008456	rbm47	100	80.800	ENSSTOG00000004727	RBM47	100	81.586	Ictidomys_tridecemlineatus
ENSPREG00000008456	rbm47	97	86.158	ENSJJAG00000013823	Rbm47	96	79.412	Jaculus_jaculus
ENSPREG00000008456	rbm47	100	93.333	ENSKMAG00000000084	rbm47	100	93.333	Kryptolebias_marmoratus
ENSPREG00000008456	rbm47	100	91.260	ENSLBEG00000008436	rbm47	100	91.184	Labrus_bergylta
ENSPREG00000008456	rbm47	100	85.411	ENSLACG00000007196	RBM47	96	80.796	Latimeria_chalumnae
ENSPREG00000008456	rbm47	100	87.433	ENSLOCG00000012966	rbm47	92	84.429	Lepisosteus_oculatus
ENSPREG00000008456	rbm47	100	82.353	ENSLAFG00000011998	RBM47	97	79.723	Loxodonta_africana
ENSPREG00000008456	rbm47	100	80.749	ENSMFAG00000037967	RBM47	96	87.042	Macaca_fascicularis
ENSPREG00000008456	rbm47	100	80.749	ENSMMUG00000012036	RBM47	100	83.420	Macaca_mulatta
ENSPREG00000008456	rbm47	100	80.749	ENSMNEG00000040774	RBM47	96	87.042	Macaca_nemestrina
ENSPREG00000008456	rbm47	100	83.175	ENSMLEG00000041432	RBM47	97	89.456	Mandrillus_leucophaeus
ENSPREG00000008456	rbm47	100	92.545	ENSMAMG00000019143	rbm47	100	92.695	Mastacembelus_armatus
ENSPREG00000008456	rbm47	100	90.488	ENSMZEG00005023659	rbm47	100	90.680	Maylandia_zebra
ENSPREG00000008456	rbm47	100	85.106	ENSMGAG00000012226	RBM47	96	81.724	Meleagris_gallopavo
ENSPREG00000008456	rbm47	100	80.739	ENSMAUG00000006493	Rbm47	100	82.278	Mesocricetus_auratus
ENSPREG00000008456	rbm47	94	82.336	ENSMICG00000026417	RBM47	96	85.836	Microcebus_murinus
ENSPREG00000008456	rbm47	100	80.688	ENSMOCG00000021170	Rbm47	100	81.646	Microtus_ochrogaster
ENSPREG00000008456	rbm47	100	91.260	ENSMMOG00000007260	rbm47	100	88.543	Mola_mola
ENSPREG00000008456	rbm47	100	84.000	ENSMODG00000007003	RBM47	96	80.035	Monodelphis_domestica
ENSPREG00000008456	rbm47	99	81.818	ENSMODG00000020561	-	96	74.435	Monodelphis_domestica
ENSPREG00000008456	rbm47	58	78.710	ENSMODG00000015426	-	97	78.710	Monodelphis_domestica
ENSPREG00000008456	rbm47	100	92.412	ENSMALG00000005167	rbm47	100	90.537	Monopterus_albus
ENSPREG00000008456	rbm47	100	80.688	MGP_CAROLIEiJ_G0027258	Rbm47	100	81.646	Mus_caroli
ENSPREG00000008456	rbm47	100	80.952	ENSMUSG00000070780	Rbm47	98	84.848	Mus_musculus
ENSPREG00000008456	rbm47	100	80.688	MGP_PahariEiJ_G0017040	Rbm47	98	84.573	Mus_pahari
ENSPREG00000008456	rbm47	100	80.952	MGP_SPRETEiJ_G0028253	Rbm47	96	85.915	Mus_spretus
ENSPREG00000008456	rbm47	100	81.600	ENSMPUG00000006177	RBM47	91	79.723	Mustela_putorius_furo
ENSPREG00000008456	rbm47	99	84.595	ENSMLUG00000000889	RBM47	100	77.073	Myotis_lucifugus
ENSPREG00000008456	rbm47	100	83.245	ENSNGAG00000003325	Rbm47	100	75.974	Nannospalax_galili
ENSPREG00000008456	rbm47	100	90.746	ENSNBRG00000015092	rbm47	100	88.907	Neolamprologus_brichardi
ENSPREG00000008456	rbm47	100	80.749	ENSNLEG00000017151	RBM47	96	87.042	Nomascus_leucogenys
ENSPREG00000008456	rbm47	69	85.833	ENSMEUG00000009516	-	99	79.953	Notamacropus_eugenii
ENSPREG00000008456	rbm47	86	84.232	ENSOPRG00000016507	-	75	84.232	Ochotona_princeps
ENSPREG00000008456	rbm47	100	79.733	ENSODEG00000004873	RBM47	100	82.400	Octodon_degus
ENSPREG00000008456	rbm47	100	91.517	ENSONIG00000009061	rbm47	100	89.034	Oreochromis_niloticus
ENSPREG00000008456	rbm47	100	81.912	ENSOANG00000008978	RBM47	96	80.696	Ornithorhynchus_anatinus
ENSPREG00000008456	rbm47	100	80.851	ENSOCUG00000012034	RBM47	100	82.181	Oryctolagus_cuniculus
ENSPREG00000008456	rbm47	100	91.935	ENSORLG00000005847	rbm47	100	90.769	Oryzias_latipes
ENSPREG00000008456	rbm47	100	91.935	ENSORLG00020005154	rbm47	100	90.769	Oryzias_latipes_hni
ENSPREG00000008456	rbm47	100	91.935	ENSORLG00015000066	rbm47	100	90.769	Oryzias_latipes_hsok
ENSPREG00000008456	rbm47	100	91.644	ENSOMEG00000010730	rbm47	100	88.368	Oryzias_melastigma
ENSPREG00000008456	rbm47	100	75.733	ENSOGAG00000025193	-	96	72.743	Otolemur_garnettii
ENSPREG00000008456	rbm47	100	81.867	ENSOGAG00000029367	-	96	79.723	Otolemur_garnettii
ENSPREG00000008456	rbm47	100	70.745	ENSOARG00000012711	RBM47	96	72.097	Ovis_aries
ENSPREG00000008456	rbm47	100	80.749	ENSPPAG00000029763	RBM47	95	83.777	Pan_paniscus
ENSPREG00000008456	rbm47	94	81.720	ENSPPRG00000012873	RBM47	96	86.723	Panthera_pardus
ENSPREG00000008456	rbm47	83	75.591	ENSPTIG00000017046	RBM47	100	75.984	Panthera_tigris_altaica
ENSPREG00000008456	rbm47	100	80.749	ENSPTRG00000016006	RBM47	96	87.042	Pan_troglodytes
ENSPREG00000008456	rbm47	100	80.749	ENSPANG00000005980	RBM47	96	87.042	Papio_anubis
ENSPREG00000008456	rbm47	97	82.643	ENSPKIG00000005037	rbm47	100	79.024	Paramormyrops_kingsleyae
ENSPREG00000008456	rbm47	100	78.532	ENSPKIG00000013431	RBM47	98	84.062	Paramormyrops_kingsleyae
ENSPREG00000008456	rbm47	87	85.638	ENSPSIG00000017516	RBM47	93	82.941	Pelodiscus_sinensis
ENSPREG00000008456	rbm47	100	91.081	ENSPMGG00000018540	rbm47	97	90.210	Periophthalmus_magnuspinnatus
ENSPREG00000008456	rbm47	100	80.688	ENSPEMG00000011088	Rbm47	96	85.634	Peromyscus_maniculatus_bairdii
ENSPREG00000008456	rbm47	100	98.854	ENSPFOG00000007997	rbm47	100	98.854	Poecilia_formosa
ENSPREG00000008456	rbm47	100	98.852	ENSPLAG00000002072	rbm47	100	98.852	Poecilia_latipinna
ENSPREG00000008456	rbm47	100	99.728	ENSPMEG00000017492	rbm47	100	99.486	Poecilia_mexicana
ENSPREG00000008456	rbm47	97	74.157	ENSPPYG00000014688	RBM47	98	70.205	Pongo_abelii
ENSPREG00000008456	rbm47	88	80.052	ENSPCAG00000011879	RBM47	77	86.243	Procavia_capensis
ENSPREG00000008456	rbm47	100	74.525	ENSPCOG00000023451	RBM47	96	85.552	Propithecus_coquereli
ENSPREG00000008456	rbm47	100	80.371	ENSPVAG00000003812	RBM47	100	76.585	Pteropus_vampyrus
ENSPREG00000008456	rbm47	100	90.488	ENSPNYG00000022868	rbm47	100	88.780	Pundamilia_nyererei
ENSPREG00000008456	rbm47	100	85.934	ENSPNAG00000007940	rbm47	100	82.686	Pygocentrus_nattereri
ENSPREG00000008456	rbm47	100	80.952	ENSRNOG00000002408	Rbm47	98	78.803	Rattus_norvegicus
ENSPREG00000008456	rbm47	100	81.915	ENSRBIG00000039601	RBM47	96	86.761	Rhinopithecus_bieti
ENSPREG00000008456	rbm47	100	81.915	ENSRROG00000044696	RBM47	96	86.761	Rhinopithecus_roxellana
ENSPREG00000008456	rbm47	100	72.520	ENSSBOG00000028475	RBM47	97	83.465	Saimiri_boliviensis_boliviensis
ENSPREG00000008456	rbm47	100	84.267	ENSSHAG00000017576	RBM47	100	84.267	Sarcophilus_harrisii
ENSPREG00000008456	rbm47	99	83.471	ENSSFOG00015024101	RBM47	99	78.209	Scleropages_formosus
ENSPREG00000008456	rbm47	100	76.998	ENSSFOG00015012445	rbm47	100	83.163	Scleropages_formosus
ENSPREG00000008456	rbm47	100	90.746	ENSSMAG00000009744	rbm47	100	90.932	Scophthalmus_maximus
ENSPREG00000008456	rbm47	100	91.957	ENSSDUG00000022684	rbm47	100	89.727	Seriola_dumerili
ENSPREG00000008456	rbm47	100	92.954	ENSSLDG00000003109	rbm47	100	91.349	Seriola_lalandi_dorsalis
ENSPREG00000008456	rbm47	85	77.564	ENSSARG00000001735	RBM47	84	81.333	Sorex_araneus
ENSPREG00000008456	rbm47	100	84.043	ENSSPUG00000007515	RBM47	96	86.479	Sphenodon_punctatus
ENSPREG00000008456	rbm47	100	93.243	ENSSPAG00000001257	rbm47	100	93.059	Stegastes_partitus
ENSPREG00000008456	rbm47	100	82.181	ENSSSCG00000008796	RBM47	96	80.208	Sus_scrofa
ENSPREG00000008456	rbm47	100	84.043	ENSTGUG00000008705	RBM47	96	80.763	Taeniopygia_guttata
ENSPREG00000008456	rbm47	100	85.738	ENSTRUG00000014050	rbm47	99	88.966	Takifugu_rubripes
ENSPREG00000008456	rbm47	100	90.746	ENSTNIG00000006127	rbm47	100	87.725	Tetraodon_nigroviridis
ENSPREG00000008456	rbm47	87	79.679	ENSTBEG00000001607	RBM47	73	84.463	Tupaia_belangeri
ENSPREG00000008456	rbm47	100	81.915	ENSTTRG00000002839	RBM47	96	79.896	Tursiops_truncatus
ENSPREG00000008456	rbm47	100	80.533	ENSUAMG00000021346	RBM47	96	79.723	Ursus_americanus
ENSPREG00000008456	rbm47	52	84.000	ENSVPAG00000000641	-	53	88.710	Vicugna_pacos
ENSPREG00000008456	rbm47	97	85.269	ENSVVUG00000014774	RBM47	96	79.652	Vulpes_vulpes
ENSPREG00000008456	rbm47	100	84.656	ENSXETG00000012802	rbm47	92	84.656	Xenopus_tropicalis
ENSPREG00000008456	rbm47	100	97.115	ENSXCOG00000000780	rbm47	100	97.115	Xiphophorus_couchianus
ENSPREG00000008456	rbm47	100	98.972	ENSXMAG00000009874	rbm47	100	98.992	Xiphophorus_maculatus