EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008522 (Gene tree)
Gene ID: 103457395
Gene Symbol: rbm25b
Alias: -
Full Name: RNA-binding protein 25
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 11412 bases
Position: chrLG21:11240582-11251993
Accession: 103457395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012630	RRM_1	PF00076.22	3e-09	1	1
ENSPREP00000012583	RRM_1	PF00076.22	3.2e-09	1	1
ENSPREP00000012597	RRM_1	PF00076.22	3.2e-09	1	1
ENSPREP00000012583	PWI	PF01480.17	2.6e-13	1	1
ENSPREP00000012597	PWI	PF01480.17	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012716	-	2993	XM_008397487	ENSPREP00000012583	828 (aa)	XP_008395709	UPI0004A2B66C
ENSPRET00000012730	-	2840	-	ENSPREP00000012597	829 (aa)	-	-
ENSPRET00000012763	-	2373	-	ENSPREP00000012630	790 (aa)	-	-

Gene Model

Click here to download ENSPREG00000008522's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008522	rbm25b	55	76.509	ENSPREG00000009228	rbm25a	57	73.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008522	rbm25b	55	79.914	ENSAPOG00000017757	rbm25a	58	77.686	Acanthochromis_polyacanthus
ENSPREG00000008522	rbm25b	58	88.613	ENSAPOG00000015321	rbm25b	59	89.189	Acanthochromis_polyacanthus
ENSPREG00000008522	rbm25b	55	77.970	ENSACIG00000019482	rbm25a	57	75.926	Amphilophus_citrinellus
ENSPREG00000008522	rbm25b	58	85.300	ENSACIG00000014178	rbm25b	57	84.200	Amphilophus_citrinellus
ENSPREG00000008522	rbm25b	55	76.890	ENSAOCG00000013695	rbm25a	56	75.711	Amphiprion_ocellaris
ENSPREG00000008522	rbm25b	59	83.778	ENSAOCG00000019308	rbm25b	57	83.784	Amphiprion_ocellaris
ENSPREG00000008522	rbm25b	55	78.970	ENSAPEG00000007514	rbm25a	58	77.160	Amphiprion_percula
ENSPREG00000008522	rbm25b	59	86.789	ENSAPEG00000009666	rbm25b	61	87.318	Amphiprion_percula
ENSPREG00000008522	rbm25b	57	78.706	ENSATEG00000020676	rbm25a	63	76.330	Anabas_testudineus
ENSPREG00000008522	rbm25b	59	88.501	ENSATEG00000017312	rbm25b	57	87.967	Anabas_testudineus
ENSPREG00000008522	rbm25b	58	90.269	ENSACLG00000024359	rbm25b	57	89.627	Astatotilapia_calliptera
ENSPREG00000008522	rbm25b	90	73.387	ENSACLG00000027482	rbm25a	77	73.747	Astatotilapia_calliptera
ENSPREG00000008522	rbm25b	84	75.982	ENSAMXG00000024525	rbm25b	52	75.289	Astyanax_mexicanus
ENSPREG00000008522	rbm25b	65	86.301	ENSCHOG00000008903	RBM25	63	84.507	Choloepus_hoffmanni
ENSPREG00000008522	rbm25b	54	68.293	ENSCPBG00000011025	RBM25	82	66.960	Chrysemys_picta_bellii
ENSPREG00000008522	rbm25b	56	74.409	ENSCSEG00000009430	rbm25a	55	74.292	Cynoglossus_semilaevis
ENSPREG00000008522	rbm25b	100	80.676	ENSCSEG00000020737	rbm25b	58	83.195	Cynoglossus_semilaevis
ENSPREG00000008522	rbm25b	67	73.004	ENSCVAG00000005498	rbm25a	99	73.383	Cyprinodon_variegatus
ENSPREG00000008522	rbm25b	54	61.435	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSPREG00000008522	rbm25b	54	69.710	ENSETEG00000015941	RBM25	83	69.890	Echinops_telfairi
ENSPREG00000008522	rbm25b	72	38.176	ENSEBUG00000002963	rbm25b	63	36.946	Eptatretus_burgeri
ENSPREG00000008522	rbm25b	84	71.569	ENSEEUG00000007350	RBM25	81	71.910	Erinaceus_europaeus
ENSPREG00000008522	rbm25b	100	75.149	ENSELUG00000007730	rbm25b	55	77.706	Esox_lucius
ENSPREG00000008522	rbm25b	58	91.925	ENSFHEG00000003513	rbm25b	59	90.890	Fundulus_heteroclitus
ENSPREG00000008522	rbm25b	56	69.149	ENSFHEG00000005318	rbm25a	60	74.000	Fundulus_heteroclitus
ENSPREG00000008522	rbm25b	78	68.704	ENSGMOG00000014070	rbm25a	86	68.618	Gadus_morhua
ENSPREG00000008522	rbm25b	87	78.667	ENSGMOG00000014097	rbm25b	50	78.667	Gadus_morhua
ENSPREG00000008522	rbm25b	100	71.496	ENSGAFG00000018036	rbm25a	53	74.946	Gambusia_affinis
ENSPREG00000008522	rbm25b	98	96.925	ENSGAFG00000001092	rbm25b	88	96.925	Gambusia_affinis
ENSPREG00000008522	rbm25b	58	89.855	ENSHBUG00000018499	rbm25b	57	89.212	Haplochromis_burtoni
ENSPREG00000008522	rbm25b	55	78.402	ENSHBUG00000016908	rbm25a	58	75.514	Haplochromis_burtoni
ENSPREG00000008522	rbm25b	100	75.743	ENSHCOG00000000142	rbm25b	58	77.899	Hippocampus_comes
ENSPREG00000008522	rbm25b	55	68.640	ENSIPUG00000021051	rbm25b	56	71.753	Ictalurus_punctatus
ENSPREG00000008522	rbm25b	59	73.031	ENSKMAG00000016242	rbm25a	55	75.000	Kryptolebias_marmoratus
ENSPREG00000008522	rbm25b	56	76.509	ENSKMAG00000018826	rbm25b	55	79.002	Kryptolebias_marmoratus
ENSPREG00000008522	rbm25b	100	87.229	ENSLBEG00000010667	rbm25b	57	84.979	Labrus_bergylta
ENSPREG00000008522	rbm25b	59	67.008	ENSLACG00000011845	RBM25	51	73.789	Latimeria_chalumnae
ENSPREG00000008522	rbm25b	57	68.866	ENSLOCG00000014196	rbm25b	54	68.916	Lepisosteus_oculatus
ENSPREG00000008522	rbm25b	84	73.469	ENSMAMG00000000165	rbm25a	51	73.804	Mastacembelus_armatus
ENSPREG00000008522	rbm25b	59	87.216	ENSMAMG00000004524	rbm25b	57	86.458	Mastacembelus_armatus
ENSPREG00000008522	rbm25b	55	78.402	ENSMZEG00005011183	rbm25a	58	75.514	Maylandia_zebra
ENSPREG00000008522	rbm25b	58	90.269	ENSMZEG00005001453	rbm25b	57	89.627	Maylandia_zebra
ENSPREG00000008522	rbm25b	100	90.086	ENSMMOG00000015545	rbm25b	94	90.529	Mola_mola
ENSPREG00000008522	rbm25b	57	75.732	ENSMMOG00000009065	rbm25a	57	72.521	Mola_mola
ENSPREG00000008522	rbm25b	59	88.821	ENSMALG00000020441	rbm25b	89	87.810	Monopterus_albus
ENSPREG00000008522	rbm25b	51	68.677	ENSMLUG00000015434	-	53	66.183	Myotis_lucifugus
ENSPREG00000008522	rbm25b	54	63.516	ENSMLUG00000024167	-	53	65.909	Myotis_lucifugus
ENSPREG00000008522	rbm25b	58	82.609	ENSNBRG00000022192	rbm25b	56	79.876	Neolamprologus_brichardi
ENSPREG00000008522	rbm25b	83	77.907	ENSNBRG00000003761	rbm25a	58	75.514	Neolamprologus_brichardi
ENSPREG00000008522	rbm25b	100	60.292	ENSOCUG00000013737	RBM25	64	79.508	Oryctolagus_cuniculus
ENSPREG00000008522	rbm25b	59	83.745	ENSORLG00000011874	rbm25b	57	85.386	Oryzias_latipes
ENSPREG00000008522	rbm25b	59	83.951	ENSORLG00020016422	rbm25b	57	85.595	Oryzias_latipes_hni
ENSPREG00000008522	rbm25b	59	83.951	ENSORLG00015011269	rbm25b	57	85.595	Oryzias_latipes_hsok
ENSPREG00000008522	rbm25b	71	68.035	ENSORLG00015022499	rbm25a	50	67.039	Oryzias_latipes_hsok
ENSPREG00000008522	rbm25b	58	85.477	ENSOMEG00000023172	rbm25b	57	85.177	Oryzias_melastigma
ENSPREG00000008522	rbm25b	84	69.604	ENSOMEG00000022138	rbm25a	59	73.441	Oryzias_melastigma
ENSPREG00000008522	rbm25b	58	75.208	ENSPKIG00000003203	rbm25b	58	72.951	Paramormyrops_kingsleyae
ENSPREG00000008522	rbm25b	53	60.586	ENSPMGG00000001791	rbm25a	100	63.697	Periophthalmus_magnuspinnatus
ENSPREG00000008522	rbm25b	99	83.774	ENSPMGG00000015740	rbm25b	58	81.687	Periophthalmus_magnuspinnatus
ENSPREG00000008522	rbm25b	100	98.671	ENSPFOG00000018808	rbm25b	100	98.671	Poecilia_formosa
ENSPREG00000008522	rbm25b	100	72.406	ENSPLAG00000018338	rbm25a	53	74.880	Poecilia_latipinna
ENSPREG00000008522	rbm25b	100	98.671	ENSPMEG00000019161	rbm25b	100	98.671	Poecilia_mexicana
ENSPREG00000008522	rbm25b	100	72.052	ENSPMEG00000024470	rbm25a	53	74.880	Poecilia_mexicana
ENSPREG00000008522	rbm25b	79	72.330	ENSPCAG00000006226	RBM25	76	71.491	Procavia_capensis
ENSPREG00000008522	rbm25b	58	73.387	ENSPNYG00000022596	rbm25a	52	73.986	Pundamilia_nyererei
ENSPREG00000008522	rbm25b	58	82.816	ENSPNYG00000023303	rbm25b	56	80.083	Pundamilia_nyererei
ENSPREG00000008522	rbm25b	59	75.153	ENSPNAG00000012024	rbm25b	57	74.481	Pygocentrus_nattereri
ENSPREG00000008522	rbm25b	57	74.370	ENSSFOG00015007093	rbm25	58	72.107	Scleropages_formosus
ENSPREG00000008522	rbm25b	57	77.035	ENSSMAG00000009745	rbm25a	59	75.464	Scophthalmus_maximus
ENSPREG00000008522	rbm25b	55	80.130	ENSSDUG00000017984	rbm25a	59	77.893	Seriola_dumerili
ENSPREG00000008522	rbm25b	55	80.130	ENSSLDG00000010342	rbm25a	58	77.893	Seriola_lalandi_dorsalis
ENSPREG00000008522	rbm25b	100	86.194	ENSSLDG00000024573	rbm25b	97	90.969	Seriola_lalandi_dorsalis
ENSPREG00000008522	rbm25b	55	78.511	ENSSPAG00000011114	rbm25a	58	76.721	Stegastes_partitus
ENSPREG00000008522	rbm25b	100	88.782	ENSSPAG00000016168	rbm25b	58	89.397	Stegastes_partitus
ENSPREG00000008522	rbm25b	57	73.529	ENSTRUG00000003076	rbm25a	58	73.261	Takifugu_rubripes
ENSPREG00000008522	rbm25b	100	82.113	ENSTRUG00000017964	rbm25b	58	87.552	Takifugu_rubripes
ENSPREG00000008522	rbm25b	96	76.877	ENSTNIG00000012222	rbm25b	67	84.361	Tetraodon_nigroviridis
ENSPREG00000008522	rbm25b	55	80.097	ENSTBEG00000010538	-	54	80.097	Tupaia_belangeri
ENSPREG00000008522	rbm25b	84	66.809	ENSVPAG00000009052	RBM25	76	72.807	Vicugna_pacos
ENSPREG00000008522	rbm25b	95	59.675	ENSXETG00000021857	rbm25	53	72.527	Xenopus_tropicalis
ENSPREG00000008522	rbm25b	100	90.785	ENSXCOG00000002222	rbm25b	52	94.089	Xiphophorus_couchianus
ENSPREG00000008522	rbm25b	100	71.596	ENSXCOG00000004043	RBM25	53	74.510	Xiphophorus_couchianus
ENSPREG00000008522	rbm25b	100	68.953	ENSXMAG00000009077	RBM25	60	70.508	Xiphophorus_maculatus
ENSPREG00000008522	rbm25b	100	97.949	ENSXMAG00000017290	rbm25b	100	97.949	Xiphophorus_maculatus