EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008528 (Gene tree)
Gene ID: -
Gene Symbol: SNAI2
Alias: -
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 1019 bases
Position: chrLG17:21323505-21324523
Accession: 103479685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012552	zf-C2H2	PF00096.26	3.8e-27	1	5
ENSPREP00000012552	zf-C2H2	PF00096.26	3.8e-27	2	5
ENSPREP00000012552	zf-C2H2	PF00096.26	3.8e-27	3	5
ENSPREP00000012552	zf-C2H2	PF00096.26	3.8e-27	4	5
ENSPREP00000012552	zf-C2H2	PF00096.26	3.8e-27	5	5
ENSPREP00000012552	zf-met	PF12874.7	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012685	SNAI2-201	819	XM_008434251	ENSPREP00000012552	272 (aa)	XP_008432473	-

Gene Model

Click here to download ENSPREG00000008528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008528	SNAI2	54	37.313	ENSPREG00000017631	znf668	75	39.259
ENSPREG00000008528	SNAI2	68	33.577	ENSPREG00000021246	-	90	35.606
ENSPREG00000008528	SNAI2	62	38.532	ENSPREG00000016593	-	54	38.532
ENSPREG00000008528	SNAI2	50	40.741	ENSPREG00000000364	-	68	40.741
ENSPREG00000008528	SNAI2	56	41.333	ENSPREG00000013780	-	91	41.333
ENSPREG00000008528	SNAI2	51	33.945	ENSPREG00000000451	-	68	33.945
ENSPREG00000008528	SNAI2	54	36.567	ENSPREG00000013719	-	73	36.567
ENSPREG00000008528	SNAI2	53	40.769	ENSPREG00000014477	-	92	38.806
ENSPREG00000008528	SNAI2	54	37.037	ENSPREG00000010437	-	76	36.697
ENSPREG00000008528	SNAI2	55	38.519	ENSPREG00000001514	zgc:113343	66	38.519
ENSPREG00000008528	SNAI2	50	39.552	ENSPREG00000013965	-	92	39.552
ENSPREG00000008528	SNAI2	64	38.776	ENSPREG00000003523	-	65	38.776
ENSPREG00000008528	SNAI2	65	38.806	ENSPREG00000004672	-	87	37.681
ENSPREG00000008528	SNAI2	71	35.036	ENSPREG00000007875	znf384l	51	35.036
ENSPREG00000008528	SNAI2	50	41.791	ENSPREG00000001823	-	77	41.791
ENSPREG00000008528	SNAI2	92	40.239	ENSPREG00000018985	scrt1b	86	39.841
ENSPREG00000008528	SNAI2	50	38.462	ENSPREG00000015247	-	75	38.462
ENSPREG00000008528	SNAI2	60	41.441	ENSPREG00000014366	-	95	41.441
ENSPREG00000008528	SNAI2	56	40.476	ENSPREG00000004306	-	93	40.476
ENSPREG00000008528	SNAI2	71	39.706	ENSPREG00000003483	-	88	39.706
ENSPREG00000008528	SNAI2	51	36.567	ENSPREG00000016204	-	68	36.567
ENSPREG00000008528	SNAI2	51	36.170	ENSPREG00000001386	-	86	36.170
ENSPREG00000008528	SNAI2	56	35.329	ENSPREG00000002548	-	77	36.076
ENSPREG00000008528	SNAI2	51	47.368	ENSPREG00000009372	-	77	41.045
ENSPREG00000008528	SNAI2	62	44.186	ENSPREG00000001441	-	97	43.878
ENSPREG00000008528	SNAI2	51	37.405	ENSPREG00000016129	-	90	37.405
ENSPREG00000008528	SNAI2	50	40.909	ENSPREG00000003393	-	74	40.909
ENSPREG00000008528	SNAI2	65	36.538	ENSPREG00000000853	-	62	36.538
ENSPREG00000008528	SNAI2	54	44.030	ENSPREG00000013476	-	97	40.541
ENSPREG00000008528	SNAI2	52	41.912	ENSPREG00000015286	-	86	41.912
ENSPREG00000008528	SNAI2	85	50.400	ENSPREG00000018470	-	68	58.696
ENSPREG00000008528	SNAI2	64	44.000	ENSPREG00000011439	-	99	44.000
ENSPREG00000008528	SNAI2	50	39.394	ENSPREG00000014105	-	81	39.394
ENSPREG00000008528	SNAI2	69	41.379	ENSPREG00000003193	-	99	41.379
ENSPREG00000008528	SNAI2	51	40.367	ENSPREG00000019806	-	53	40.367
ENSPREG00000008528	SNAI2	70	41.905	ENSPREG00000013689	-	94	41.905
ENSPREG00000008528	SNAI2	64	41.441	ENSPREG00000005144	-	97	41.176
ENSPREG00000008528	SNAI2	56	40.678	ENSPREG00000013112	-	84	40.678
ENSPREG00000008528	SNAI2	80	43.284	ENSPREG00000014800	-	99	43.511
ENSPREG00000008528	SNAI2	53	43.269	ENSPREG00000016186	-	62	43.269
ENSPREG00000008528	SNAI2	51	37.313	ENSPREG00000013727	-	67	37.313
ENSPREG00000008528	SNAI2	68	42.857	ENSPREG00000012132	-	96	41.985
ENSPREG00000008528	SNAI2	54	35.616	ENSPREG00000016858	ZNF319	80	36.170
ENSPREG00000008528	SNAI2	58	39.844	ENSPREG00000015017	-	93	39.706
ENSPREG00000008528	SNAI2	52	39.706	ENSPREG00000000153	-	93	39.706
ENSPREG00000008528	SNAI2	53	41.509	ENSPREG00000004839	-	84	38.060
ENSPREG00000008528	SNAI2	63	42.727	ENSPREG00000011741	-	97	42.537
ENSPREG00000008528	SNAI2	82	43.750	ENSPREG00000003614	-	97	44.144
ENSPREG00000008528	SNAI2	69	40.299	ENSPREG00000003894	-	92	42.276
ENSPREG00000008528	SNAI2	57	42.537	ENSPREG00000004036	-	98	42.537
ENSPREG00000008528	SNAI2	54	39.837	ENSPREG00000013699	-	62	39.837
ENSPREG00000008528	SNAI2	54	37.963	ENSPREG00000014127	-	82	36.765
ENSPREG00000008528	SNAI2	55	44.660	ENSPREG00000001713	-	88	44.660
ENSPREG00000008528	SNAI2	68	41.985	ENSPREG00000002181	-	94	42.424
ENSPREG00000008528	SNAI2	50	45.588	ENSPREG00000010261	zbtb17	61	46.970
ENSPREG00000008528	SNAI2	56	40.909	ENSPREG00000002642	-	91	40.909
ENSPREG00000008528	SNAI2	52	38.462	ENSPREG00000002696	-	87	38.462
ENSPREG00000008528	SNAI2	50	40.876	ENSPREG00000018366	prdm5	72	40.876
ENSPREG00000008528	SNAI2	88	35.821	ENSPREG00000014851	-	73	41.860
ENSPREG00000008528	SNAI2	54	40.146	ENSPREG00000002715	-	81	40.146
ENSPREG00000008528	SNAI2	51	37.226	ENSPREG00000021718	gfi1b	52	37.226
ENSPREG00000008528	SNAI2	61	37.778	ENSPREG00000014373	-	92	37.778
ENSPREG00000008528	SNAI2	56	40.187	ENSPREG00000019161	-	93	40.187
ENSPREG00000008528	SNAI2	68	39.024	ENSPREG00000001952	-	90	40.789
ENSPREG00000008528	SNAI2	63	34.759	ENSPREG00000016270	-	73	34.759
ENSPREG00000008528	SNAI2	61	43.243	ENSPREG00000019972	-	99	43.243
ENSPREG00000008528	SNAI2	64	35.461	ENSPREG00000015132	-	61	35.821
ENSPREG00000008528	SNAI2	55	43.210	ENSPREG00000014028	-	97	39.552
ENSPREG00000008528	SNAI2	67	38.824	ENSPREG00000005015	-	95	39.831
ENSPREG00000008528	SNAI2	52	43.373	ENSPREG00000020014	-	93	41.905
ENSPREG00000008528	SNAI2	54	38.889	ENSPREG00000007997	GFI1	51	37.719
ENSPREG00000008528	SNAI2	86	40.239	ENSPREG00000001147	scrt2	79	39.841
ENSPREG00000008528	SNAI2	56	38.760	ENSPREG00000001743	-	85	38.760
ENSPREG00000008528	SNAI2	50	42.000	ENSPREG00000008826	-	68	40.244
ENSPREG00000008528	SNAI2	63	39.552	ENSPREG00000002637	-	73	39.552
ENSPREG00000008528	SNAI2	51	43.382	ENSPREG00000003217	-	76	43.382

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008528	SNAI2	51	76.087	ENSG00000185669	SNAI3	58	64.045	Homo_sapiens
ENSPREG00000008528	SNAI2	86	77.273	ENSG00000019549	SNAI2	90	78.926	Homo_sapiens
ENSPREG00000008528	SNAI2	86	78.926	ENSAMEG00000009606	SNAI2	90	80.579	Ailuropoda_melanoleuca
ENSPREG00000008528	SNAI2	86	77.686	ENSANAG00000021163	SNAI2	90	79.339	Aotus_nancymaae
ENSPREG00000008528	SNAI2	86	76.446	ENSBTAG00000013227	SNAI2	90	78.099	Bos_taurus
ENSPREG00000008528	SNAI2	86	77.273	ENSCJAG00000013499	SNAI2	90	78.926	Callithrix_jacchus
ENSPREG00000008528	SNAI2	86	78.512	ENSCAFG00000006638	SNAI2	90	80.165	Canis_familiaris
ENSPREG00000008528	SNAI2	51	75.362	ENSCAFG00020004719	SNAI3	55	65.663	Canis_lupus_dingo
ENSPREG00000008528	SNAI2	86	78.512	ENSCAFG00020015384	SNAI2	90	80.165	Canis_lupus_dingo
ENSPREG00000008528	SNAI2	86	76.033	ENSCHIG00000024410	SNAI2	90	77.686	Capra_hircus
ENSPREG00000008528	SNAI2	86	77.593	ENSTSYG00000030892	SNAI2	90	79.253	Carlito_syrichta
ENSPREG00000008528	SNAI2	79	79.821	ENSCAPG00000013078	SNAI2	100	81.614	Cavia_aperea
ENSPREG00000008528	SNAI2	86	77.273	ENSCCAG00000024100	SNAI2	90	78.926	Cebus_capucinus
ENSPREG00000008528	SNAI2	86	77.273	ENSCATG00000028656	SNAI2	90	78.926	Cercocebus_atys
ENSPREG00000008528	SNAI2	86	78.512	ENSCLAG00000011797	SNAI2	90	80.165	Chinchilla_lanigera
ENSPREG00000008528	SNAI2	86	77.273	ENSCSAG00000014787	SNAI2	90	78.926	Chlorocebus_sabaeus
ENSPREG00000008528	SNAI2	62	72.619	ENSCPBG00000023474	SNAI3	59	72.619	Chrysemys_picta_bellii
ENSPREG00000008528	SNAI2	86	78.926	ENSCPBG00000020255	SNAI2	90	80.579	Chrysemys_picta_bellii
ENSPREG00000008528	SNAI2	86	77.273	ENSCANG00000029656	SNAI2	90	78.926	Colobus_angolensis_palliatus
ENSPREG00000008528	SNAI2	86	77.273	ENSCGRG00001013674	Snai2	90	78.926	Cricetulus_griseus_chok1gshd
ENSPREG00000008528	SNAI2	86	77.273	ENSCGRG00000012119	Snai2	90	78.926	Cricetulus_griseus_crigri
ENSPREG00000008528	SNAI2	86	76.446	ENSDORG00000029620	Snai2	90	76.860	Dipodomys_ordii
ENSPREG00000008528	SNAI2	61	67.879	ENSECAG00000012131	SNAI3	54	67.879	Equus_caballus
ENSPREG00000008528	SNAI2	55	64.000	ENSEEUG00000000841	SNAI3	54	64.000	Erinaceus_europaeus
ENSPREG00000008528	SNAI2	54	82.192	ENSELUG00000018742	-	53	82.192	Esox_lucius
ENSPREG00000008528	SNAI2	86	90.171	ENSELUG00000021795	SNAI2	71	90.171	Esox_lucius
ENSPREG00000008528	SNAI2	85	64.783	ENSFALG00000012974	-	98	64.655	Ficedula_albicollis
ENSPREG00000008528	SNAI2	86	78.099	ENSFDAG00000016958	SNAI2	90	79.752	Fukomys_damarensis
ENSPREG00000008528	SNAI2	62	71.429	ENSGAGG00000023571	SNAI3	59	71.429	Gopherus_agassizii
ENSPREG00000008528	SNAI2	86	78.926	ENSGAGG00000000426	SNAI2	90	80.579	Gopherus_agassizii
ENSPREG00000008528	SNAI2	86	77.273	ENSGGOG00000000959	SNAI2	90	78.926	Gorilla_gorilla
ENSPREG00000008528	SNAI2	86	81.702	ENSHCOG00000019435	SNAI2	90	83.051	Hippocampus_comes
ENSPREG00000008528	SNAI2	93	68.561	ENSIPUG00000000131	snai2	90	71.084	Ictalurus_punctatus
ENSPREG00000008528	SNAI2	86	79.339	ENSSTOG00000028743	SNAI2	90	80.165	Ictidomys_tridecemlineatus
ENSPREG00000008528	SNAI2	51	84.286	ENSLOCG00000004887	SNAI3	97	77.358	Lepisosteus_oculatus
ENSPREG00000008528	SNAI2	86	84.298	ENSLOCG00000005992	SNAI2	90	85.950	Lepisosteus_oculatus
ENSPREG00000008528	SNAI2	85	54.583	ENSLAFG00000005117	SNAI3	89	54.583	Loxodonta_africana
ENSPREG00000008528	SNAI2	86	78.512	ENSLAFG00000009299	SNAI2	90	80.165	Loxodonta_africana
ENSPREG00000008528	SNAI2	86	77.273	ENSMFAG00000046061	SNAI2	90	78.926	Macaca_fascicularis
ENSPREG00000008528	SNAI2	86	77.273	ENSMMUG00000016195	SNAI2	90	78.926	Macaca_mulatta
ENSPREG00000008528	SNAI2	86	77.273	ENSMNEG00000034216	SNAI2	90	78.926	Macaca_nemestrina
ENSPREG00000008528	SNAI2	86	77.273	ENSMLEG00000034407	SNAI2	90	78.926	Mandrillus_leucophaeus
ENSPREG00000008528	SNAI2	86	76.860	ENSMAUG00000008119	Snai2	90	78.512	Mesocricetus_auratus
ENSPREG00000008528	SNAI2	86	77.273	ENSMOCG00000006622	Snai2	90	78.926	Microtus_ochrogaster
ENSPREG00000008528	SNAI2	86	80.165	ENSMODG00000010173	SNAI2	90	80.165	Monodelphis_domestica
ENSPREG00000008528	SNAI2	86	78.189	MGP_CAROLIEiJ_G0020483	Snai2	90	79.835	Mus_caroli
ENSPREG00000008528	SNAI2	86	78.601	ENSMUSG00000022676	Snai2	90	80.247	Mus_musculus
ENSPREG00000008528	SNAI2	86	78.189	MGP_PahariEiJ_G0016188	Snai2	90	79.835	Mus_pahari
ENSPREG00000008528	SNAI2	86	78.601	MGP_SPRETEiJ_G0021379	Snai2	90	80.247	Mus_spretus
ENSPREG00000008528	SNAI2	86	78.926	ENSMPUG00000010793	SNAI2	90	80.579	Mustela_putorius_furo
ENSPREG00000008528	SNAI2	86	76.860	ENSMLUG00000001086	SNAI2	90	78.512	Myotis_lucifugus
ENSPREG00000008528	SNAI2	86	77.686	ENSNLEG00000013421	SNAI2	90	79.339	Nomascus_leucogenys
ENSPREG00000008528	SNAI2	83	80.851	ENSMEUG00000009510	SNAI2	90	80.851	Notamacropus_eugenii
ENSPREG00000008528	SNAI2	86	78.512	ENSOANG00000007267	SNAI2	90	80.165	Ornithorhynchus_anatinus
ENSPREG00000008528	SNAI2	86	76.033	ENSOARG00000013030	SNAI2	90	77.686	Ovis_aries
ENSPREG00000008528	SNAI2	86	77.273	ENSPPAG00000015662	SNAI2	90	78.926	Pan_paniscus
ENSPREG00000008528	SNAI2	86	79.339	ENSPPRG00000012562	-	90	80.992	Panthera_pardus
ENSPREG00000008528	SNAI2	86	79.424	ENSPTIG00000007593	SNAI2	77	81.070	Panthera_tigris_altaica
ENSPREG00000008528	SNAI2	86	77.273	ENSPTRG00000020235	SNAI2	90	78.926	Pan_troglodytes
ENSPREG00000008528	SNAI2	86	77.273	ENSPANG00000017540	SNAI2	90	78.926	Papio_anubis
ENSPREG00000008528	SNAI2	86	85.124	ENSPKIG00000002254	SNAI2	90	85.124	Paramormyrops_kingsleyae
ENSPREG00000008528	SNAI2	86	78.926	ENSPSIG00000016395	SNAI2	90	80.579	Pelodiscus_sinensis
ENSPREG00000008528	SNAI2	61	71.687	ENSPSIG00000004262	SNAI3	65	71.687	Pelodiscus_sinensis
ENSPREG00000008528	SNAI2	86	93.590	ENSPMGG00000013179	SNAI2	90	93.590	Periophthalmus_magnuspinnatus
ENSPREG00000008528	SNAI2	86	76.860	ENSPEMG00000011739	Snai2	90	78.512	Peromyscus_maniculatus_bairdii
ENSPREG00000008528	SNAI2	86	80.579	ENSPCIG00000025156	SNAI2	90	80.579	Phascolarctos_cinereus
ENSPREG00000008528	SNAI2	86	77.273	ENSPPYG00000018578	SNAI2	90	78.926	Pongo_abelii
ENSPREG00000008528	SNAI2	86	78.512	ENSPCOG00000015656	SNAI2	90	80.165	Propithecus_coquereli
ENSPREG00000008528	SNAI2	86	78.512	ENSPVAG00000009457	SNAI2	90	80.165	Pteropus_vampyrus
ENSPREG00000008528	SNAI2	86	77.273	ENSRBIG00000041133	SNAI2	90	78.926	Rhinopithecus_bieti
ENSPREG00000008528	SNAI2	86	77.273	ENSRROG00000032273	SNAI2	90	78.926	Rhinopithecus_roxellana
ENSPREG00000008528	SNAI2	86	77.273	ENSSBOG00000035774	SNAI2	90	78.926	Saimiri_boliviensis_boliviensis
ENSPREG00000008528	SNAI2	86	80.579	ENSSHAG00000004205	SNAI2	90	80.579	Sarcophilus_harrisii
ENSPREG00000008528	SNAI2	86	82.377	ENSSFOG00015018025	SNAI2	90	82.377	Scleropages_formosus
ENSPREG00000008528	SNAI2	86	78.926	ENSSPUG00000005427	-	90	80.579	Sphenodon_punctatus
ENSPREG00000008528	SNAI2	93	71.536	ENSSSCG00000039568	SNAI2	100	73.034	Sus_scrofa
ENSPREG00000008528	SNAI2	82	80.870	ENSUAMG00000014942	SNAI2	100	82.609	Ursus_americanus
ENSPREG00000008528	SNAI2	86	78.926	ENSUMAG00000006525	SNAI2	92	80.579	Ursus_maritimus
ENSPREG00000008528	SNAI2	86	78.512	ENSVVUG00000017625	SNAI2	90	80.165	Vulpes_vulpes
ENSPREG00000008528	SNAI2	51	75.362	ENSVVUG00000003233	SNAI3	55	65.663	Vulpes_vulpes
ENSPREG00000008528	SNAI2	86	80.579	ENSXETG00000024006	snai2	90	77.686	Xenopus_tropicalis