EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008530 (Gene tree)
Gene ID: 103467202
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC103467202
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 1126 bases
Position: chrLG1:19790307-19791432
Accession: 103467202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012550	zf-CCCH	PF00642.24	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012683	-	1023	XM_008413347	ENSPREP00000012550	235 (aa)	XP_008411569	UPI0004A4E6CE

Gene Model

Click here to download ENSPREG00000008530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008530	si:ch211-113e8.11	100	62.308	ENSAPOG00000010990	si:ch211-113e8.11	100	64.231	Acanthochromis_polyacanthus
ENSPREG00000008530	si:ch211-113e8.11	59	73.103	ENSACIG00000011566	si:ch211-113e8.11	94	66.000	Amphilophus_citrinellus
ENSPREG00000008530	si:ch211-113e8.11	100	63.178	ENSAOCG00000022156	si:ch211-113e8.11	100	64.341	Amphiprion_ocellaris
ENSPREG00000008530	si:ch211-113e8.11	100	63.178	ENSAPEG00000018284	si:ch211-113e8.11	100	63.953	Amphiprion_percula
ENSPREG00000008530	si:ch211-113e8.11	100	63.821	ENSATEG00000018391	si:ch211-113e8.11	100	63.821	Anabas_testudineus
ENSPREG00000008530	si:ch211-113e8.11	100	68.313	ENSACLG00000017011	si:ch211-113e8.11	100	68.313	Astatotilapia_calliptera
ENSPREG00000008530	si:ch211-113e8.11	97	49.804	ENSAMXG00000000733	si:ch211-113e8.11	97	50.588	Astyanax_mexicanus
ENSPREG00000008530	si:ch211-113e8.11	99	59.289	ENSCSEG00000004538	si:ch211-113e8.11	99	59.289	Cynoglossus_semilaevis
ENSPREG00000008530	si:ch211-113e8.11	100	74.390	ENSCVAG00000020156	si:ch211-113e8.11	99	73.577	Cyprinodon_variegatus
ENSPREG00000008530	si:ch211-113e8.11	95	49.785	ENSDARG00000076585	si:ch211-113e8.11	97	51.064	Danio_rerio
ENSPREG00000008530	si:ch211-113e8.11	100	52.471	ENSELUG00000001130	si:ch211-113e8.11	100	51.673	Esox_lucius
ENSPREG00000008530	si:ch211-113e8.11	100	68.333	ENSFHEG00000007870	si:ch211-113e8.11	99	68.333	Fundulus_heteroclitus
ENSPREG00000008530	si:ch211-113e8.11	100	90.871	ENSGAFG00000020570	si:ch211-113e8.11	100	90.041	Gambusia_affinis
ENSPREG00000008530	si:ch211-113e8.11	100	67.078	ENSHBUG00000003552	si:ch211-113e8.11	100	67.490	Haplochromis_burtoni
ENSPREG00000008530	si:ch211-113e8.11	99	56.557	ENSHCOG00000002041	si:ch211-113e8.11	99	57.085	Hippocampus_comes
ENSPREG00000008530	si:ch211-113e8.11	95	50.877	ENSIPUG00000002260	si:ch211-113e8.11	93	52.193	Ictalurus_punctatus
ENSPREG00000008530	si:ch211-113e8.11	100	70.782	ENSKMAG00000000086	si:ch211-113e8.11	99	70.782	Kryptolebias_marmoratus
ENSPREG00000008530	si:ch211-113e8.11	100	53.558	ENSLBEG00000008353	si:ch211-113e8.11	100	55.431	Labrus_bergylta
ENSPREG00000008530	si:ch211-113e8.11	64	43.871	ENSLACG00000004304	si:ch211-113e8.11	77	44.872	Latimeria_chalumnae
ENSPREG00000008530	si:ch211-113e8.11	98	57.200	ENSMAMG00000019098	si:ch211-113e8.11	90	61.674	Mastacembelus_armatus
ENSPREG00000008530	si:ch211-113e8.11	100	69.167	ENSMZEG00005023658	si:ch211-113e8.11	100	69.167	Maylandia_zebra
ENSPREG00000008530	si:ch211-113e8.11	100	54.167	ENSMMOG00000007254	si:ch211-113e8.11	100	54.959	Mola_mola
ENSPREG00000008530	si:ch211-113e8.11	100	60.311	ENSMALG00000005110	si:ch211-113e8.11	100	60.311	Monopterus_albus
ENSPREG00000008530	si:ch211-113e8.11	100	68.313	ENSNBRG00000015060	si:ch211-113e8.11	100	68.313	Neolamprologus_brichardi
ENSPREG00000008530	si:ch211-113e8.11	100	58.167	ENSORLG00000023699	si:ch211-113e8.11	100	57.371	Oryzias_latipes
ENSPREG00000008530	si:ch211-113e8.11	100	58.167	ENSORLG00020022094	si:ch211-113e8.11	100	57.371	Oryzias_latipes_hni
ENSPREG00000008530	si:ch211-113e8.11	100	57.371	ENSORLG00015002588	si:ch211-113e8.11	100	56.574	Oryzias_latipes_hsok
ENSPREG00000008530	si:ch211-113e8.11	100	60.241	ENSOMEG00000010624	si:ch211-113e8.11	100	59.514	Oryzias_melastigma
ENSPREG00000008530	si:ch211-113e8.11	97	44.770	ENSPKIG00000023576	si:ch211-113e8.11	96	45.833	Paramormyrops_kingsleyae
ENSPREG00000008530	si:ch211-113e8.11	96	56.579	ENSPMGG00000018547	si:ch211-113e8.11	97	57.456	Periophthalmus_magnuspinnatus
ENSPREG00000008530	si:ch211-113e8.11	97	91.915	ENSPFOG00000007950	si:ch211-113e8.11	100	91.915	Poecilia_formosa
ENSPREG00000008530	si:ch211-113e8.11	100	93.361	ENSPLAG00000002081	si:ch211-113e8.11	100	93.361	Poecilia_latipinna
ENSPREG00000008530	si:ch211-113e8.11	100	93.361	ENSPMEG00000017505	si:ch211-113e8.11	100	93.361	Poecilia_mexicana
ENSPREG00000008530	si:ch211-113e8.11	100	68.313	ENSPNYG00000022856	si:ch211-113e8.11	100	68.313	Pundamilia_nyererei
ENSPREG00000008530	si:ch211-113e8.11	97	42.339	ENSPNAG00000013782	si:ch211-113e8.11	99	41.797	Pygocentrus_nattereri
ENSPREG00000008530	si:ch211-113e8.11	97	46.154	ENSSFOG00015000959	si:ch211-113e8.11	97	46.281	Scleropages_formosus
ENSPREG00000008530	si:ch211-113e8.11	100	63.673	ENSSMAG00000009732	si:ch211-113e8.11	100	64.372	Scophthalmus_maximus
ENSPREG00000008530	si:ch211-113e8.11	100	66.008	ENSSDUG00000000112	si:ch211-113e8.11	100	65.476	Seriola_dumerili
ENSPREG00000008530	si:ch211-113e8.11	100	64.427	ENSSLDG00000003287	si:ch211-113e8.11	100	63.492	Seriola_lalandi_dorsalis
ENSPREG00000008530	si:ch211-113e8.11	100	63.035	ENSSPAG00000001375	si:ch211-113e8.11	100	63.424	Stegastes_partitus
ENSPREG00000008530	si:ch211-113e8.11	99	53.815	ENSTRUG00000023898	si:ch211-113e8.11	99	54.357	Takifugu_rubripes
ENSPREG00000008530	si:ch211-113e8.11	100	89.627	ENSXMAG00000024104	si:ch211-113e8.11	100	90.041	Xiphophorus_maculatus