EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008576 (Gene tree)
Gene ID: 103476682
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5296 bases
Position: chrLG15:10317187-10322482
Accession: 103476682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012628	zf-C2H2	PF00096.26	3.6e-12	1	3
ENSPREP00000012628	zf-C2H2	PF00096.26	3.6e-12	2	3
ENSPREP00000012628	zf-C2H2	PF00096.26	3.6e-12	3	3
ENSPREP00000012633	zf-C2H2	PF00096.26	3.9e-12	1	3
ENSPREP00000012633	zf-C2H2	PF00096.26	3.9e-12	2	3
ENSPREP00000012633	zf-C2H2	PF00096.26	3.9e-12	3	3
ENSPREP00000012628	zf-met	PF12874.7	4.7e-05	1	1
ENSPREP00000012633	zf-met	PF12874.7	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012761	-	2786	XM_008429172	ENSPREP00000012628	575 (aa)	XP_008427394	UPI0004A2CDC6
ENSPRET00000012766	-	1861	XM_008429171	ENSPREP00000012633	582 (aa)	XP_008427393	UPI0004A2AEDC

Gene Model

Click here to download ENSPREG00000008576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008576	zbtb18	52	41.026	ENSPREG00000015369	zbtb16a	56	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008576	zbtb18	99	93.241	ENSAPOG00000005168	zbtb18	99	92.721	Acanthochromis_polyacanthus
ENSPREG00000008576	zbtb18	99	83.713	ENSACIG00000008655	zbtb18	99	94.949	Amphilophus_citrinellus
ENSPREG00000008576	zbtb18	100	93.537	ENSAOCG00000014105	zbtb18	100	93.027	Amphiprion_ocellaris
ENSPREG00000008576	zbtb18	99	92.586	ENSAPEG00000003817	zbtb18	79	92.414	Amphiprion_percula
ENSPREG00000008576	zbtb18	99	92.683	ENSATEG00000010192	zbtb18	99	92.683	Anabas_testudineus
ENSPREG00000008576	zbtb18	100	92.821	ENSACLG00000022978	zbtb18	100	92.821	Astatotilapia_calliptera
ENSPREG00000008576	zbtb18	100	72.913	ENSAMXG00000042119	zbtb18	100	72.913	Astyanax_mexicanus
ENSPREG00000008576	zbtb18	100	89.744	ENSCSEG00000003083	zbtb18	100	89.744	Cynoglossus_semilaevis
ENSPREG00000008576	zbtb18	100	94.701	ENSCVAG00000016785	zbtb18	100	94.701	Cyprinodon_variegatus
ENSPREG00000008576	zbtb18	98	70.557	ENSDARG00000028228	zbtb18	100	72.997	Danio_rerio
ENSPREG00000008576	zbtb18	99	75.302	ENSELUG00000013471	zbtb18	99	75.302	Esox_lucius
ENSPREG00000008576	zbtb18	99	95.139	ENSFHEG00000020005	zbtb18	99	95.139	Fundulus_heteroclitus
ENSPREG00000008576	zbtb18	56	94.656	ENSGMOG00000018718	zbtb18	58	91.192	Gadus_morhua
ENSPREG00000008576	zbtb18	100	98.609	ENSGAFG00000000619	zbtb18	100	98.609	Gambusia_affinis
ENSPREG00000008576	zbtb18	99	88.091	ENSGACG00000010518	zbtb18	96	88.616	Gasterosteus_aculeatus
ENSPREG00000008576	zbtb18	99	92.683	ENSHBUG00000013654	zbtb18	99	92.683	Haplochromis_burtoni
ENSPREG00000008576	zbtb18	61	82.723	ENSHCOG00000002345	zbtb18	94	82.723	Hippocampus_comes
ENSPREG00000008576	zbtb18	100	64.566	ENSIPUG00000008912	zbtb18	100	65.758	Ictalurus_punctatus
ENSPREG00000008576	zbtb18	100	94.017	ENSKMAG00000002780	zbtb18	100	94.017	Kryptolebias_marmoratus
ENSPREG00000008576	zbtb18	99	90.941	ENSLBEG00000014796	zbtb18	99	90.941	Labrus_bergylta
ENSPREG00000008576	zbtb18	84	58.600	ENSMFAG00000033326	ZBTB18	99	57.400	Macaca_fascicularis
ENSPREG00000008576	zbtb18	84	58.717	ENSMMUG00000015664	ZBTB18	100	57.490	Macaca_mulatta
ENSPREG00000008576	zbtb18	99	92.857	ENSMAMG00000021720	zbtb18	99	92.857	Mastacembelus_armatus
ENSPREG00000008576	zbtb18	100	92.821	ENSMZEG00005027394	zbtb18	100	92.821	Maylandia_zebra
ENSPREG00000008576	zbtb18	94	50.647	ENSMGAG00000015389	-	100	50.462	Meleagris_gallopavo
ENSPREG00000008576	zbtb18	98	84.832	ENSMMOG00000007888	zbtb18	99	84.832	Mola_mola
ENSPREG00000008576	zbtb18	99	91.638	ENSMALG00000000725	zbtb18	99	91.638	Monopterus_albus
ENSPREG00000008576	zbtb18	98	92.756	ENSNBRG00000013796	zbtb18	100	92.756	Neolamprologus_brichardi
ENSPREG00000008576	zbtb18	99	93.031	ENSONIG00000000862	zbtb18	99	93.031	Oreochromis_niloticus
ENSPREG00000008576	zbtb18	100	92.308	ENSORLG00000027425	zbtb18	100	92.308	Oryzias_latipes
ENSPREG00000008576	zbtb18	100	92.479	ENSORLG00020011988	zbtb18	100	92.479	Oryzias_latipes_hni
ENSPREG00000008576	zbtb18	100	92.479	ENSORLG00015017457	zbtb18	100	92.479	Oryzias_latipes_hsok
ENSPREG00000008576	zbtb18	100	93.162	ENSOMEG00000011249	zbtb18	100	93.162	Oryzias_melastigma
ENSPREG00000008576	zbtb18	98	54.861	ENSPKIG00000008787	-	100	54.861	Paramormyrops_kingsleyae
ENSPREG00000008576	zbtb18	99	69.310	ENSPKIG00000021964	zbtb18	96	69.795	Paramormyrops_kingsleyae
ENSPREG00000008576	zbtb18	98	81.625	ENSPMGG00000008020	zbtb18	100	81.625	Periophthalmus_magnuspinnatus
ENSPREG00000008576	zbtb18	98	98.401	ENSPFOG00000022080	zbtb18	100	98.401	Poecilia_formosa
ENSPREG00000008576	zbtb18	98	92.185	ENSPLAG00000020960	zbtb18	100	92.185	Poecilia_latipinna
ENSPREG00000008576	zbtb18	98	92.185	ENSPLAG00000011299	-	100	92.185	Poecilia_latipinna
ENSPREG00000008576	zbtb18	98	99.290	ENSPMEG00000007554	zbtb18	100	99.290	Poecilia_mexicana
ENSPREG00000008576	zbtb18	99	92.683	ENSPNYG00000001530	zbtb18	99	92.683	Pundamilia_nyererei
ENSPREG00000008576	zbtb18	86	71.120	ENSPNAG00000014066	zbtb18	87	71.120	Pygocentrus_nattereri
ENSPREG00000008576	zbtb18	98	90.636	ENSSMAG00000018041	zbtb18	100	90.636	Scophthalmus_maximus
ENSPREG00000008576	zbtb18	98	93.816	ENSSDUG00000018660	zbtb18	100	93.816	Seriola_dumerili
ENSPREG00000008576	zbtb18	98	93.816	ENSSLDG00000022573	zbtb18	100	93.816	Seriola_lalandi_dorsalis
ENSPREG00000008576	zbtb18	75	82.308	ENSSPUG00000010554	-	100	49.358	Sphenodon_punctatus
ENSPREG00000008576	zbtb18	99	93.206	ENSSPAG00000002691	zbtb18	99	93.206	Stegastes_partitus
ENSPREG00000008576	zbtb18	98	91.166	ENSTRUG00000020604	zbtb18	100	91.166	Takifugu_rubripes
ENSPREG00000008576	zbtb18	99	84.495	ENSTNIG00000000430	zbtb18	99	85.192	Tetraodon_nigroviridis
ENSPREG00000008576	zbtb18	98	92.895	ENSXCOG00000013308	zbtb18	100	92.895	Xiphophorus_couchianus
ENSPREG00000008576	zbtb18	99	88.556	ENSXMAG00000018241	zbtb18	99	88.556	Xiphophorus_maculatus