EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008711 (Gene tree)
Gene ID: 103474860
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 6600 bases
Position: chrLG13:23582813-23589412
Accession: 103474860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012860	Nop53	PF07767.11	2.8e-80	1	2
ENSPREP00000012860	Nop53	PF07767.11	2.8e-80	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012993	-	1296	XM_008426118	ENSPREP00000012860	431 (aa)	XP_008424340	-

Gene Model

Click here to download ENSPREG00000008711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008711	nop53	88	45.116	ENSG00000105373	NOP53	99	75.904	Homo_sapiens
ENSPREG00000008711	nop53	100	72.198	ENSAPOG00000006446	nop53	100	71.767	Acanthochromis_polyacanthus
ENSPREG00000008711	nop53	88	42.369	ENSAMEG00000015214	NOP53	88	42.597	Ailuropoda_melanoleuca
ENSPREG00000008711	nop53	74	69.486	ENSACIG00000002467	nop53	99	70.091	Amphilophus_citrinellus
ENSPREG00000008711	nop53	100	72.570	ENSAOCG00000007002	nop53	100	72.138	Amphiprion_ocellaris
ENSPREG00000008711	nop53	100	72.629	ENSAPEG00000024564	nop53	100	72.198	Amphiprion_percula
ENSPREG00000008711	nop53	96	70.787	ENSATEG00000021860	nop53	100	70.787	Anabas_testudineus
ENSPREG00000008711	nop53	56	50.183	ENSACAG00000011362	-	93	50.183	Anolis_carolinensis
ENSPREG00000008711	nop53	96	39.741	ENSANAG00000007933	NOP53	92	41.404	Aotus_nancymaae
ENSPREG00000008711	nop53	100	70.323	ENSACLG00000011832	nop53	100	70.753	Astatotilapia_calliptera
ENSPREG00000008711	nop53	97	58.407	ENSAMXG00000014883	nop53	99	58.836	Astyanax_mexicanus
ENSPREG00000008711	nop53	88	44.522	ENSBTAG00000021192	NOP53	79	44.522	Bos_taurus
ENSPREG00000008711	nop53	88	44.931	ENSCJAG00000011385	NOP53	88	45.433	Callithrix_jacchus
ENSPREG00000008711	nop53	96	44.374	ENSCAFG00000004080	NOP53	88	44.186	Canis_familiaris
ENSPREG00000008711	nop53	88	44.941	ENSCHIG00000009393	NOP53	88	44.706	Capra_hircus
ENSPREG00000008711	nop53	82	45.500	ENSCAPG00000013148	NOP53	99	45.750	Cavia_aperea
ENSPREG00000008711	nop53	96	45.161	ENSCPOG00000015665	NOP53	88	46.934	Cavia_porcellus
ENSPREG00000008711	nop53	88	45.349	ENSCCAG00000025477	NOP53	87	45.863	Cebus_capucinus
ENSPREG00000008711	nop53	88	46.099	ENSCATG00000032842	NOP53	87	46.099	Cercocebus_atys
ENSPREG00000008711	nop53	99	43.478	ENSCLAG00000001860	NOP53	88	45.433	Chinchilla_lanigera
ENSPREG00000008711	nop53	88	44.884	ENSCSAG00000002928	NOP53	87	45.626	Chlorocebus_sabaeus
ENSPREG00000008711	nop53	84	48.507	ENSCPBG00000009047	NOP53	94	48.507	Chrysemys_picta_bellii
ENSPREG00000008711	nop53	88	30.516	ENSCING00000021395	-	96	30.896	Ciona_intestinalis
ENSPREG00000008711	nop53	88	43.735	ENSCANG00000039648	NOP53	86	44.712	Colobus_angolensis_palliatus
ENSPREG00000008711	nop53	96	43.376	ENSCGRG00001019033	Nop53	88	44.028	Cricetulus_griseus_chok1gshd
ENSPREG00000008711	nop53	98	60.965	ENSCSEG00000014834	nop53	98	60.177	Cynoglossus_semilaevis
ENSPREG00000008711	nop53	100	77.944	ENSCVAG00000005940	nop53	100	80.514	Cyprinodon_variegatus
ENSPREG00000008711	nop53	99	59.348	ENSDARG00000100452	nop53	99	59.519	Danio_rerio
ENSPREG00000008711	nop53	97	43.255	ENSDNOG00000005165	NOP53	79	45.882	Dasypus_novemcinctus
ENSPREG00000008711	nop53	56	41.825	ENSDORG00000016339	-	68	47.030	Dipodomys_ordii
ENSPREG00000008711	nop53	93	42.130	ENSEBUG00000012747	nop53	90	40.723	Eptatretus_burgeri
ENSPREG00000008711	nop53	96	43.041	ENSEASG00005004345	NOP53	84	45.116	Equus_asinus_asinus
ENSPREG00000008711	nop53	96	42.373	ENSECAG00000026850	NOP53	84	44.598	Equus_caballus
ENSPREG00000008711	nop53	84	81.250	ENSEEUG00000005287	NOP53	73	81.250	Erinaceus_europaeus
ENSPREG00000008711	nop53	100	61.339	ENSELUG00000001525	nop53	100	60.480	Esox_lucius
ENSPREG00000008711	nop53	88	44.651	ENSFCAG00000010861	NOP53	88	44.186	Felis_catus
ENSPREG00000008711	nop53	100	79.185	ENSFHEG00000017763	nop53	97	78.755	Fundulus_heteroclitus
ENSPREG00000008711	nop53	100	60.811	ENSGMOG00000014299	nop53	100	59.821	Gadus_morhua
ENSPREG00000008711	nop53	96	42.918	ENSGALG00000039473	NOP53	70	45.327	Gallus_gallus
ENSPREG00000008711	nop53	99	84.301	ENSGAFG00000013301	nop53	100	82.599	Gambusia_affinis
ENSPREG00000008711	nop53	100	62.931	ENSGACG00000005766	nop53	100	64.000	Gasterosteus_aculeatus
ENSPREG00000008711	nop53	88	43.765	ENSGGOG00000005462	NOP53	87	44.258	Gorilla_gorilla
ENSPREG00000008711	nop53	88	41.412	ENSGGOG00000024728	-	87	41.727	Gorilla_gorilla
ENSPREG00000008711	nop53	100	70.538	ENSHBUG00000023625	nop53	100	70.968	Haplochromis_burtoni
ENSPREG00000008711	nop53	96	43.991	ENSHGLG00000018240	NOP53	88	45.412	Heterocephalus_glaber_female
ENSPREG00000008711	nop53	78	63.717	ENSHGLG00100015613	NOP53	79	65.094	Heterocephalus_glaber_male
ENSPREG00000008711	nop53	100	64.669	ENSHCOG00000017133	nop53	100	65.762	Hippocampus_comes
ENSPREG00000008711	nop53	99	59.259	ENSIPUG00000008154	nop53	88	59.430	Ictalurus_punctatus
ENSPREG00000008711	nop53	99	44.770	ENSSTOG00000022092	NOP53	87	45.972	Ictidomys_tridecemlineatus
ENSPREG00000008711	nop53	96	41.595	ENSJJAG00000007854	Nop53	88	44.601	Jaculus_jaculus
ENSPREG00000008711	nop53	96	75.561	ENSKMAG00000020756	nop53	100	75.112	Kryptolebias_marmoratus
ENSPREG00000008711	nop53	100	69.114	ENSLBEG00000011432	nop53	100	68.898	Labrus_bergylta
ENSPREG00000008711	nop53	84	50.376	ENSLACG00000018320	NOP53	99	50.376	Latimeria_chalumnae
ENSPREG00000008711	nop53	100	55.921	ENSLOCG00000014178	nop53	100	55.263	Lepisosteus_oculatus
ENSPREG00000008711	nop53	88	44.884	ENSMFAG00000045103	NOP53	87	45.863	Macaca_fascicularis
ENSPREG00000008711	nop53	88	45.116	ENSMMUG00000013348	NOP53	99	75.904	Macaca_mulatta
ENSPREG00000008711	nop53	88	45.116	ENSMNEG00000042540	NOP53	84	46.099	Macaca_nemestrina
ENSPREG00000008711	nop53	88	45.363	ENSMLEG00000032475	NOP53	87	45.113	Mandrillus_leucophaeus
ENSPREG00000008711	nop53	100	70.362	ENSMAMG00000012652	nop53	100	70.576	Mastacembelus_armatus
ENSPREG00000008711	nop53	100	68.202	ENSMZEG00005005033	nop53	100	68.202	Maylandia_zebra
ENSPREG00000008711	nop53	96	42.950	ENSMAUG00000012617	Nop53	87	44.048	Mesocricetus_auratus
ENSPREG00000008711	nop53	91	43.665	ENSMICG00000005580	NOP53	92	44.366	Microcebus_murinus
ENSPREG00000008711	nop53	96	44.060	ENSMOCG00000008367	Nop53	88	44.656	Microtus_ochrogaster
ENSPREG00000008711	nop53	100	70.217	ENSMMOG00000006515	nop53	100	71.300	Mola_mola
ENSPREG00000008711	nop53	99	43.590	ENSMODG00000008721	NOP53	90	42.763	Monodelphis_domestica
ENSPREG00000008711	nop53	100	71.212	ENSMALG00000020350	nop53	96	71.861	Monopterus_albus
ENSPREG00000008711	nop53	96	42.979	MGP_CAROLIEiJ_G0029218	Nop53	88	44.289	Mus_caroli
ENSPREG00000008711	nop53	96	42.766	ENSMUSG00000041560	Nop53	88	44.056	Mus_musculus
ENSPREG00000008711	nop53	84	42.926	MGP_PahariEiJ_G0021074	-	95	42.651	Mus_pahari
ENSPREG00000008711	nop53	96	42.275	MGP_SPRETEiJ_G0030298	Nop53	88	43.529	Mus_spretus
ENSPREG00000008711	nop53	96	42.373	ENSMPUG00000004456	NOP53	88	43.619	Mustela_putorius_furo
ENSPREG00000008711	nop53	53	45.489	ENSMLUG00000027066	-	99	43.985	Myotis_lucifugus
ENSPREG00000008711	nop53	96	43.284	ENSNGAG00000019894	Nop53	88	43.692	Nannospalax_galili
ENSPREG00000008711	nop53	95	65.358	ENSNBRG00000002057	nop53	93	65.358	Neolamprologus_brichardi
ENSPREG00000008711	nop53	99	43.416	ENSNLEG00000003143	NOP53	87	45.863	Nomascus_leucogenys
ENSPREG00000008711	nop53	94	35.033	ENSNLEG00000028326	-	89	37.789	Nomascus_leucogenys
ENSPREG00000008711	nop53	76	40.936	ENSMEUG00000002525	-	99	39.883	Notamacropus_eugenii
ENSPREG00000008711	nop53	96	44.211	ENSODEG00000006707	NOP53	88	46.028	Octodon_degus
ENSPREG00000008711	nop53	100	70.968	ENSONIG00000016624	nop53	100	71.398	Oreochromis_niloticus
ENSPREG00000008711	nop53	100	68.132	ENSORLG00000008659	nop53	100	67.912	Oryzias_latipes
ENSPREG00000008711	nop53	100	66.520	ENSORLG00020019916	nop53	97	66.300	Oryzias_latipes_hni
ENSPREG00000008711	nop53	100	68.817	ENSORLG00015001315	nop53	100	67.603	Oryzias_latipes_hsok
ENSPREG00000008711	nop53	97	69.737	ENSOMEG00000018244	nop53	100	68.602	Oryzias_melastigma
ENSPREG00000008711	nop53	88	79.104	ENSOGAG00000024300	NOP53	89	39.293	Otolemur_garnettii
ENSPREG00000008711	nop53	87	32.710	ENSOARG00000011414	NOP53	61	48.148	Ovis_aries
ENSPREG00000008711	nop53	88	43.488	ENSPPAG00000002927	-	87	44.208	Pan_paniscus
ENSPREG00000008711	nop53	88	44.198	ENSPPAG00000032995	-	86	43.641	Pan_paniscus
ENSPREG00000008711	nop53	96	39.565	ENSPPAG00000029337	-	87	39.048	Pan_paniscus
ENSPREG00000008711	nop53	88	44.419	ENSPPRG00000008954	NOP53	88	43.953	Panthera_pardus
ENSPREG00000008711	nop53	96	39.783	ENSPTRG00000052493	-	87	39.808	Pan_troglodytes
ENSPREG00000008711	nop53	88	45.735	ENSPTRG00000011215	NOP53	87	45.863	Pan_troglodytes
ENSPREG00000008711	nop53	88	45.735	ENSPTRG00000043520	-	87	44.578	Pan_troglodytes
ENSPREG00000008711	nop53	88	45.116	ENSPANG00000002964	NOP53	87	45.863	Papio_anubis
ENSPREG00000008711	nop53	99	56.987	ENSPKIG00000000127	nop53	99	56.484	Paramormyrops_kingsleyae
ENSPREG00000008711	nop53	100	66.739	ENSPMGG00000021579	nop53	100	66.957	Periophthalmus_magnuspinnatus
ENSPREG00000008711	nop53	96	42.706	ENSPEMG00000006856	Nop53	88	44.262	Peromyscus_maniculatus_bairdii
ENSPREG00000008711	nop53	97	41.176	ENSPCIG00000016718	NOP53	98	40.919	Phascolarctos_cinereus
ENSPREG00000008711	nop53	100	86.538	ENSPFOG00000002839	nop53	100	86.752	Poecilia_formosa
ENSPREG00000008711	nop53	100	86.538	ENSPLAG00000006675	nop53	100	86.752	Poecilia_latipinna
ENSPREG00000008711	nop53	66	80.135	ENSPLAG00000009285	-	77	91.165	Poecilia_latipinna
ENSPREG00000008711	nop53	100	93.065	ENSPMEG00000009589	nop53	100	93.065	Poecilia_mexicana
ENSPREG00000008711	nop53	66	80.471	ENSPMEG00000006978	nop53	77	91.566	Poecilia_mexicana
ENSPREG00000008711	nop53	88	42.263	ENSPPYG00000010181	NOP53	87	42.925	Pongo_abelii
ENSPREG00000008711	nop53	99	41.189	ENSPCAG00000007692	NOP53	99	40.598	Procavia_capensis
ENSPREG00000008711	nop53	88	44.332	ENSPCOG00000016124	NOP53	86	45.340	Propithecus_coquereli
ENSPREG00000008711	nop53	71	42.803	ENSPVAG00000014671	NOP53	72	42.586	Pteropus_vampyrus
ENSPREG00000008711	nop53	100	70.753	ENSPNYG00000001341	nop53	100	71.183	Pundamilia_nyererei
ENSPREG00000008711	nop53	99	60.044	ENSPNAG00000012520	nop53	99	58.643	Pygocentrus_nattereri
ENSPREG00000008711	nop53	88	45.116	ENSRNOG00000013023	Nop53	88	44.731	Rattus_norvegicus
ENSPREG00000008711	nop53	88	45.349	ENSRBIG00000036427	NOP53	87	46.336	Rhinopithecus_bieti
ENSPREG00000008711	nop53	88	45.349	ENSRROG00000042298	NOP53	88	46.336	Rhinopithecus_roxellana
ENSPREG00000008711	nop53	88	45.863	ENSSBOG00000033115	NOP53	87	45.863	Saimiri_boliviensis_boliviensis
ENSPREG00000008711	nop53	84	42.821	ENSSHAG00000002239	NOP53	99	40.786	Sarcophilus_harrisii
ENSPREG00000008711	nop53	100	59.041	ENSSFOG00015007062	gltscr2	100	59.041	Scleropages_formosus
ENSPREG00000008711	nop53	100	67.666	ENSSMAG00000000212	nop53	100	67.666	Scophthalmus_maximus
ENSPREG00000008711	nop53	100	72.354	ENSSDUG00000010575	nop53	100	72.138	Seriola_dumerili
ENSPREG00000008711	nop53	100	72.687	ENSSLDG00000000140	nop53	97	72.467	Seriola_lalandi_dorsalis
ENSPREG00000008711	nop53	72	43.605	ENSSARG00000014109	NOP53	72	43.605	Sorex_araneus
ENSPREG00000008711	nop53	97	43.848	ENSSPUG00000004420	NOP53	84	48.118	Sphenodon_punctatus
ENSPREG00000008711	nop53	100	72.688	ENSSPAG00000000318	nop53	100	72.688	Stegastes_partitus
ENSPREG00000008711	nop53	88	43.405	ENSSSCG00000022774	NOP53	87	43.405	Sus_scrofa
ENSPREG00000008711	nop53	100	67.672	ENSTRUG00000004944	nop53	100	67.888	Takifugu_rubripes
ENSPREG00000008711	nop53	55	79.839	ENSTNIG00000014330	nop53	95	79.839	Tetraodon_nigroviridis
ENSPREG00000008711	nop53	68	64.602	ENSTBEG00000008708	NOP53	63	65.094	Tupaia_belangeri
ENSPREG00000008711	nop53	88	44.393	ENSTTRG00000011831	NOP53	88	44.393	Tursiops_truncatus
ENSPREG00000008711	nop53	88	41.628	ENSUAMG00000028254	NOP53	88	42.558	Ursus_americanus
ENSPREG00000008711	nop53	74	38.606	ENSVVUG00000023365	NOP53	62	35.016	Vulpes_vulpes
ENSPREG00000008711	nop53	93	63.393	ENSXETG00000002782	nop53	91	45.542	Xenopus_tropicalis
ENSPREG00000008711	nop53	100	87.746	ENSXCOG00000004436	nop53	100	86.871	Xiphophorus_couchianus
ENSPREG00000008711	nop53	100	85.193	ENSXMAG00000002589	nop53	100	84.335	Xiphophorus_maculatus