EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000008730 (Gene tree)
Gene ID: 103469349
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 5827 bases
Position: chrLG8:25221195-25227021
Accession: 103469349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000012859	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000012992	-	4177	XM_008416967	ENSPREP00000012859	179 (aa)	XP_008415189	UPI0004A328C0

Gene Model

Click here to download ENSPREG00000008730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000008730	arl5c	98	47.458	ENSPREG00000012688	arf3b	98	47.458
ENSPREG00000008730	arl5c	98	50.000	ENSPREG00000009009	-	98	50.000
ENSPREG00000008730	arl5c	80	41.379	ENSPREG00000010815	arl11	91	41.379
ENSPREG00000008730	arl5c	89	42.515	ENSPREG00000015645	arl4cb	85	42.515
ENSPREG00000008730	arl5c	98	48.023	ENSPREG00000008632	arf2b	98	48.023
ENSPREG00000008730	arl5c	98	47.458	ENSPREG00000020988	-	98	47.458
ENSPREG00000008730	arl5c	51	34.783	ENSPREG00000002020	-	68	34.783
ENSPREG00000008730	arl5c	92	37.647	ENSPREG00000001895	-	82	37.647
ENSPREG00000008730	arl5c	92	35.976	ENSPREG00000003600	arl3l2	88	35.976
ENSPREG00000008730	arl5c	98	48.295	ENSPREG00000007723	-	98	48.295
ENSPREG00000008730	arl5c	89	40.881	ENSPREG00000014738	-	86	40.881
ENSPREG00000008730	arl5c	87	32.051	ENSPREG00000004992	arl8a	66	32.051
ENSPREG00000008730	arl5c	98	38.693	ENSPREG00000013042	-	93	38.693
ENSPREG00000008730	arl5c	94	39.106	ENSPREG00000019667	arfrp1	89	39.106
ENSPREG00000008730	arl5c	100	42.541	ENSPREG00000020490	arl2	97	42.541
ENSPREG00000008730	arl5c	83	39.216	ENSPREG00000001976	arl14	76	39.216
ENSPREG00000008730	arl5c	96	36.158	ENSPREG00000021943	ARL6	96	36.158
ENSPREG00000008730	arl5c	98	71.429	ENSPREG00000008262	arl8	98	71.429
ENSPREG00000008730	arl5c	63	30.508	ENSPREG00000014888	rab2a	55	30.508
ENSPREG00000008730	arl5c	87	41.290	ENSPREG00000003821	arl3	69	41.290
ENSPREG00000008730	arl5c	96	43.605	ENSPREG00000000912	-	100	43.605
ENSPREG00000008730	arl5c	94	73.373	ENSPREG00000002806	arl5a	64	73.373
ENSPREG00000008730	arl5c	99	38.587	ENSPREG00000021699	-	94	38.587
ENSPREG00000008730	arl5c	86	42.500	ENSPREG00000011615	arl4d	80	42.500
ENSPREG00000008730	arl5c	63	33.613	ENSPREG00000010154	rab4a	54	33.613
ENSPREG00000008730	arl5c	96	45.029	ENSPREG00000013361	arl1	91	45.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008730	arl5c	100	90.503	ENSAPOG00000005821	arl5c	100	90.503	Acanthochromis_polyacanthus
ENSPREG00000008730	arl5c	92	94.512	ENSACIG00000008975	arl5c	91	94.512	Amphilophus_citrinellus
ENSPREG00000008730	arl5c	100	90.503	ENSAOCG00000010448	arl5c	100	90.503	Amphiprion_ocellaris
ENSPREG00000008730	arl5c	100	90.503	ENSAPEG00000002699	arl5c	100	90.503	Amphiprion_percula
ENSPREG00000008730	arl5c	100	88.827	ENSATEG00000000181	arl5c	100	88.827	Anabas_testudineus
ENSPREG00000008730	arl5c	100	93.296	ENSACLG00000000922	arl5c	100	93.296	Astatotilapia_calliptera
ENSPREG00000008730	arl5c	100	83.799	ENSAMXG00000031771	arl5c	100	83.799	Astyanax_mexicanus
ENSPREG00000008730	arl5c	100	86.034	ENSCSEG00000009845	arl5c	100	86.034	Cynoglossus_semilaevis
ENSPREG00000008730	arl5c	100	96.648	ENSCVAG00000012706	arl5c	100	96.648	Cyprinodon_variegatus
ENSPREG00000008730	arl5c	100	83.240	ENSDARG00000035719	arl5c	100	83.240	Danio_rerio
ENSPREG00000008730	arl5c	100	86.034	ENSELUG00000016864	arl5c	100	86.034	Esox_lucius
ENSPREG00000008730	arl5c	100	97.207	ENSFHEG00000013677	arl5c	100	97.207	Fundulus_heteroclitus
ENSPREG00000008730	arl5c	100	97.765	ENSGAFG00000002547	arl5c	100	97.765	Gambusia_affinis
ENSPREG00000008730	arl5c	100	90.503	ENSGACG00000009321	arl5c	100	90.503	Gasterosteus_aculeatus
ENSPREG00000008730	arl5c	100	93.296	ENSHBUG00000007301	arl5c	100	93.296	Haplochromis_burtoni
ENSPREG00000008730	arl5c	100	84.916	ENSHCOG00000017576	-	100	84.916	Hippocampus_comes
ENSPREG00000008730	arl5c	100	84.358	ENSIPUG00000023232	arl5c	100	84.358	Ictalurus_punctatus
ENSPREG00000008730	arl5c	100	93.855	ENSKMAG00000011323	arl5c	100	93.855	Kryptolebias_marmoratus
ENSPREG00000008730	arl5c	100	89.385	ENSLBEG00000006177	arl5c	86	89.385	Labrus_bergylta
ENSPREG00000008730	arl5c	100	88.827	ENSMAMG00000022157	arl5c	100	88.827	Mastacembelus_armatus
ENSPREG00000008730	arl5c	100	93.296	ENSMZEG00005022925	arl5c	100	93.296	Maylandia_zebra
ENSPREG00000008730	arl5c	92	92.683	ENSMMOG00000020851	arl5c	96	92.683	Mola_mola
ENSPREG00000008730	arl5c	92	91.463	ENSMALG00000009306	arl5c	93	91.463	Monopterus_albus
ENSPREG00000008730	arl5c	100	93.855	ENSNBRG00000020245	arl5c	100	93.902	Neolamprologus_brichardi
ENSPREG00000008730	arl5c	100	93.855	ENSONIG00000000890	arl5c	99	93.855	Oreochromis_niloticus
ENSPREG00000008730	arl5c	100	86.592	ENSORLG00000002960	arl5c	100	87.195	Oryzias_latipes
ENSPREG00000008730	arl5c	100	86.592	ENSORLG00020010074	arl5c	100	87.195	Oryzias_latipes_hni
ENSPREG00000008730	arl5c	100	86.592	ENSORLG00015002752	arl5c	100	87.195	Oryzias_latipes_hsok
ENSPREG00000008730	arl5c	97	87.283	ENSOMEG00000021718	arl5c	98	87.283	Oryzias_melastigma
ENSPREG00000008730	arl5c	100	85.475	ENSPKIG00000021727	arl5c	100	85.475	Paramormyrops_kingsleyae
ENSPREG00000008730	arl5c	100	99.441	ENSPFOG00000007842	arl5c	99	99.441	Poecilia_formosa
ENSPREG00000008730	arl5c	100	98.883	ENSPLAG00000002394	arl5c	100	98.883	Poecilia_latipinna
ENSPREG00000008730	arl5c	91	100.000	ENSPMEG00000000631	arl5c	94	100.000	Poecilia_mexicana
ENSPREG00000008730	arl5c	100	93.296	ENSPNYG00000012720	arl5c	100	93.296	Pundamilia_nyererei
ENSPREG00000008730	arl5c	100	83.240	ENSPNAG00000002310	arl5c	100	83.240	Pygocentrus_nattereri
ENSPREG00000008730	arl5c	100	83.799	ENSSFOG00015023529	arl5c	100	83.799	Scleropages_formosus
ENSPREG00000008730	arl5c	100	89.385	ENSSMAG00000010552	arl5c	100	89.385	Scophthalmus_maximus
ENSPREG00000008730	arl5c	100	87.709	ENSSDUG00000022640	arl5c	100	87.709	Seriola_dumerili
ENSPREG00000008730	arl5c	100	87.709	ENSSLDG00000000728	arl5c	100	87.709	Seriola_lalandi_dorsalis
ENSPREG00000008730	arl5c	100	91.061	ENSSPAG00000007687	arl5c	100	91.061	Stegastes_partitus
ENSPREG00000008730	arl5c	100	90.503	ENSTRUG00000022814	arl5c	100	90.503	Takifugu_rubripes
ENSPREG00000008730	arl5c	100	89.944	ENSTNIG00000003015	arl5c	99	89.944	Tetraodon_nigroviridis
ENSPREG00000008730	arl5c	100	97.765	ENSXCOG00000017380	arl5c	100	97.765	Xiphophorus_couchianus
ENSPREG00000008730	arl5c	100	97.207	ENSXMAG00000008447	arl5c	100	97.207	Xiphophorus_maculatus