EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008850 (Gene tree)
Gene ID: 103456899
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9881 bases
Position: chrLG20:23409591-23419471
Accession: 103456899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013106	MA3	PF02847.17	4e-23	1	1
ENSPREP00000013106	MIF4G	PF02854.19	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013242	-	2493	XM_008396744	ENSPREP00000013106	830 (aa)	XP_008394966	UPI0004A42516

Gene Model

Click here to download ENSPREG00000008850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008850	nom1	97	54.458	ENSG00000146909	NOM1	97	54.427	Homo_sapiens
ENSPREG00000008850	nom1	64	87.782	ENSAPOG00000012073	nom1	98	73.554	Acanthochromis_polyacanthus
ENSPREG00000008850	nom1	81	59.012	ENSAMEG00000001412	NOM1	96	58.213	Ailuropoda_melanoleuca
ENSPREG00000008850	nom1	98	72.705	ENSACIG00000018050	nom1	98	73.684	Amphilophus_citrinellus
ENSPREG00000008850	nom1	98	72.835	ENSAOCG00000006229	nom1	98	73.191	Amphiprion_ocellaris
ENSPREG00000008850	nom1	98	73.452	ENSAPEG00000015994	nom1	98	73.810	Amphiprion_percula
ENSPREG00000008850	nom1	98	76.348	ENSATEG00000005405	nom1	98	76.103	Anabas_testudineus
ENSPREG00000008850	nom1	78	59.332	ENSAPLG00000006585	NOM1	80	66.667	Anas_platyrhynchos
ENSPREG00000008850	nom1	79	56.484	ENSACAG00000011192	NOM1	97	50.116	Anolis_carolinensis
ENSPREG00000008850	nom1	98	74.576	ENSACLG00000000033	nom1	98	72.914	Astatotilapia_calliptera
ENSPREG00000008850	nom1	64	74.393	ENSAMXG00000041486	nom1	98	59.859	Astyanax_mexicanus
ENSPREG00000008850	nom1	97	51.515	ENSBTAG00000016435	NOM1	97	50.234	Bos_taurus
ENSPREG00000008850	nom1	97	53.763	ENSCJAG00000004336	NOM1	95	53.144	Callithrix_jacchus
ENSPREG00000008850	nom1	56	41.344	ENSCAFG00000029845	-	93	43.424	Canis_familiaris
ENSPREG00000008850	nom1	97	52.828	ENSCAFG00020005121	NOM1	95	53.438	Canis_lupus_dingo
ENSPREG00000008850	nom1	81	57.895	ENSCHIG00000020102	NOM1	97	51.011	Capra_hircus
ENSPREG00000008850	nom1	96	54.921	ENSTSYG00000000227	NOM1	97	53.673	Carlito_syrichta
ENSPREG00000008850	nom1	62	67.823	ENSCAPG00000016273	NOM1	99	67.823	Cavia_aperea
ENSPREG00000008850	nom1	99	50.822	ENSCPOG00000025538	NOM1	96	51.011	Cavia_porcellus
ENSPREG00000008850	nom1	89	67.619	ENSCCAG00000014944	NOM1	99	67.045	Cebus_capucinus
ENSPREG00000008850	nom1	85	55.331	ENSCLAG00000000267	NOM1	80	58.129	Chinchilla_lanigera
ENSPREG00000008850	nom1	74	67.614	ENSCPBG00000018215	NOM1	84	67.614	Chrysemys_picta_bellii
ENSPREG00000008850	nom1	84	37.955	ENSCING00000005248	-	93	37.122	Ciona_intestinalis
ENSPREG00000008850	nom1	62	67.885	ENSCANG00000041984	NOM1	89	67.885	Colobus_angolensis_palliatus
ENSPREG00000008850	nom1	81	59.475	ENSCGRG00001020293	Nom1	96	54.096	Cricetulus_griseus_chok1gshd
ENSPREG00000008850	nom1	62	67.823	ENSCGRG00000005405	Nom1	97	67.823	Cricetulus_griseus_crigri
ENSPREG00000008850	nom1	94	69.823	ENSCSEG00000000932	nom1	94	69.472	Cynoglossus_semilaevis
ENSPREG00000008850	nom1	100	80.641	ENSCVAG00000007562	nom1	100	80.119	Cyprinodon_variegatus
ENSPREG00000008850	nom1	99	62.201	ENSDARG00000060027	nom1	100	74.333	Danio_rerio
ENSPREG00000008850	nom1	62	57.576	ENSDORG00000015682	Nom1	99	51.659	Dipodomys_ordii
ENSPREG00000008850	nom1	61	39.155	FBgn0035336	CG9004	77	35.745	Drosophila_melanogaster
ENSPREG00000008850	nom1	91	56.905	ENSETEG00000003104	NOM1	89	56.905	Echinops_telfairi
ENSPREG00000008850	nom1	52	48.975	ENSEBUG00000010077	nom1	96	48.853	Eptatretus_burgeri
ENSPREG00000008850	nom1	81	60.914	ENSEASG00005001489	NOM1	95	54.788	Equus_asinus_asinus
ENSPREG00000008850	nom1	65	67.216	ENSECAG00000007596	NOM1	89	54.286	Equus_caballus
ENSPREG00000008850	nom1	66	76.492	ENSELUG00000006266	nom1	98	64.176	Esox_lucius
ENSPREG00000008850	nom1	81	58.017	ENSFCAG00000006467	NOM1	95	52.695	Felis_catus
ENSPREG00000008850	nom1	81	58.832	ENSFALG00000006904	NOM1	99	59.312	Ficedula_albicollis
ENSPREG00000008850	nom1	99	52.029	ENSFDAG00000016241	NOM1	97	52.267	Fukomys_damarensis
ENSPREG00000008850	nom1	100	79.809	ENSFHEG00000015974	nom1	100	80.167	Fundulus_heteroclitus
ENSPREG00000008850	nom1	86	55.571	ENSGALG00000006437	NOM1	92	50.595	Gallus_gallus
ENSPREG00000008850	nom1	100	94.598	ENSGAFG00000003211	nom1	100	94.358	Gambusia_affinis
ENSPREG00000008850	nom1	85	57.123	ENSGAGG00000014347	NOM1	64	66.856	Gopherus_agassizii
ENSPREG00000008850	nom1	97	53.911	ENSGGOG00000010920	NOM1	89	54.191	Gorilla_gorilla
ENSPREG00000008850	nom1	98	74.757	ENSHBUG00000014616	nom1	98	74.089	Haplochromis_burtoni
ENSPREG00000008850	nom1	98	53.428	ENSHGLG00000007392	NOM1	96	53.405	Heterocephalus_glaber_female
ENSPREG00000008850	nom1	86	68.269	ENSHGLG00100014407	NOM1	96	68.269	Heterocephalus_glaber_male
ENSPREG00000008850	nom1	64	70.896	ENSIPUG00000013980	nom1	98	59.140	Ictalurus_punctatus
ENSPREG00000008850	nom1	66	65.343	ENSSTOG00000031736	NOM1	91	68.077	Ictidomys_tridecemlineatus
ENSPREG00000008850	nom1	58	68.454	ENSJJAG00000011716	Nom1	98	68.454	Jaculus_jaculus
ENSPREG00000008850	nom1	100	69.346	ENSLBEG00000009252	nom1	100	71.694	Labrus_bergylta
ENSPREG00000008850	nom1	83	61.461	ENSLACG00000011777	NOM1	98	56.348	Latimeria_chalumnae
ENSPREG00000008850	nom1	98	61.649	ENSLOCG00000012452	nom1	100	62.561	Lepisosteus_oculatus
ENSPREG00000008850	nom1	98	48.854	ENSLAFG00000007119	NOM1	98	48.372	Loxodonta_africana
ENSPREG00000008850	nom1	97	50.652	ENSMMUG00000039033	NOM1	95	51.852	Macaca_mulatta
ENSPREG00000008850	nom1	62	67.885	ENSMLEG00000037062	NOM1	98	67.885	Mandrillus_leucophaeus
ENSPREG00000008850	nom1	98	71.037	ENSMAMG00000004118	nom1	98	70.918	Mastacembelus_armatus
ENSPREG00000008850	nom1	98	74.455	ENSMZEG00005000384	nom1	98	72.640	Maylandia_zebra
ENSPREG00000008850	nom1	83	57.925	ENSMGAG00000005051	NOM1	76	65.714	Meleagris_gallopavo
ENSPREG00000008850	nom1	97	54.835	ENSMAUG00000017988	Nom1	95	54.756	Mesocricetus_auratus
ENSPREG00000008850	nom1	97	54.034	ENSMICG00000017531	NOM1	96	54.212	Microcebus_murinus
ENSPREG00000008850	nom1	99	53.919	ENSMOCG00000015962	Nom1	95	54.041	Microtus_ochrogaster
ENSPREG00000008850	nom1	99	67.139	ENSMMOG00000004419	nom1	98	67.900	Mola_mola
ENSPREG00000008850	nom1	66	67.329	ENSMODG00000005177	NOM1	98	54.309	Monodelphis_domestica
ENSPREG00000008850	nom1	93	72.401	ENSMALG00000008800	nom1	98	70.633	Monopterus_albus
ENSPREG00000008850	nom1	97	52.955	MGP_CAROLIEiJ_G0027043	Nom1	94	52.906	Mus_caroli
ENSPREG00000008850	nom1	97	53.486	ENSMUSG00000001569	Nom1	94	53.430	Mus_musculus
ENSPREG00000008850	nom1	97	52.432	MGP_SPRETEiJ_G0028039	Nom1	94	52.899	Mus_spretus
ENSPREG00000008850	nom1	81	56.250	ENSMPUG00000009745	NOM1	99	55.908	Mustela_putorius_furo
ENSPREG00000008850	nom1	72	62.438	ENSMLUG00000009129	NOM1	88	66.792	Myotis_lucifugus
ENSPREG00000008850	nom1	98	74.970	ENSNBRG00000016429	nom1	95	85.094	Neolamprologus_brichardi
ENSPREG00000008850	nom1	97	52.857	ENSNLEG00000000238	NOM1	97	52.996	Nomascus_leucogenys
ENSPREG00000008850	nom1	54	69.517	ENSMEUG00000001108	NOM1	81	52.514	Notamacropus_eugenii
ENSPREG00000008850	nom1	52	56.711	ENSOPRG00000014676	NOM1	85	44.361	Ochotona_princeps
ENSPREG00000008850	nom1	81	58.686	ENSODEG00000009399	NOM1	98	58.226	Octodon_degus
ENSPREG00000008850	nom1	94	75.000	ENSONIG00000005958	nom1	99	75.000	Oreochromis_niloticus
ENSPREG00000008850	nom1	56	67.387	ENSOANG00000006139	-	97	67.387	Ornithorhynchus_anatinus
ENSPREG00000008850	nom1	97	54.933	ENSOCUG00000004071	-	97	54.306	Oryctolagus_cuniculus
ENSPREG00000008850	nom1	94	45.019	ENSOCUG00000021448	-	97	54.493	Oryctolagus_cuniculus
ENSPREG00000008850	nom1	99	70.764	ENSORLG00000010541	nom1	98	70.012	Oryzias_latipes
ENSPREG00000008850	nom1	93	70.603	ENSORLG00020010789	nom1	100	70.218	Oryzias_latipes_hni
ENSPREG00000008850	nom1	100	69.798	ENSORLG00015010475	nom1	100	70.090	Oryzias_latipes_hsok
ENSPREG00000008850	nom1	99	71.378	ENSOMEG00000004219	nom1	98	71.394	Oryzias_melastigma
ENSPREG00000008850	nom1	62	68.714	ENSOGAG00000001124	NOM1	85	68.462	Otolemur_garnettii
ENSPREG00000008850	nom1	81	57.518	ENSOARG00000007261	NOM1	93	57.205	Ovis_aries
ENSPREG00000008850	nom1	81	60.876	ENSPPAG00000041374	NOM1	97	54.471	Pan_paniscus
ENSPREG00000008850	nom1	81	58.032	ENSPTIG00000013532	NOM1	94	58.815	Panthera_tigris_altaica
ENSPREG00000008850	nom1	81	60.557	ENSPTRG00000019917	NOM1	97	54.471	Pan_troglodytes
ENSPREG00000008850	nom1	97	54.057	ENSPANG00000007605	NOM1	95	54.808	Papio_anubis
ENSPREG00000008850	nom1	99	58.935	ENSPKIG00000005825	nom1	98	58.745	Paramormyrops_kingsleyae
ENSPREG00000008850	nom1	63	67.803	ENSPSIG00000017848	NOM1	88	67.803	Pelodiscus_sinensis
ENSPREG00000008850	nom1	98	70.588	ENSPMGG00000002577	nom1	98	70.012	Periophthalmus_magnuspinnatus
ENSPREG00000008850	nom1	97	54.480	ENSPEMG00000024180	Nom1	95	54.731	Peromyscus_maniculatus_bairdii
ENSPREG00000008850	nom1	99	53.364	ENSPCIG00000027941	NOM1	90	55.879	Phascolarctos_cinereus
ENSPREG00000008850	nom1	100	94.543	ENSPFOG00000015771	nom1	100	94.425	Poecilia_formosa
ENSPREG00000008850	nom1	68	98.043	ENSPLAG00000007856	nom1	100	91.947	Poecilia_latipinna
ENSPREG00000008850	nom1	100	94.069	ENSPMEG00000014155	nom1	100	93.832	Poecilia_mexicana
ENSPREG00000008850	nom1	97	51.335	ENSPPYG00000018222	NOM1	96	51.122	Pongo_abelii
ENSPREG00000008850	nom1	75	62.326	ENSPCAG00000000440	NOM1	83	62.326	Procavia_capensis
ENSPREG00000008850	nom1	62	66.538	ENSPCOG00000015222	NOM1	98	66.538	Propithecus_coquereli
ENSPREG00000008850	nom1	97	53.019	ENSPVAG00000014760	NOM1	95	51.971	Pteropus_vampyrus
ENSPREG00000008850	nom1	98	74.213	ENSPNYG00000006975	nom1	97	83.925	Pundamilia_nyererei
ENSPREG00000008850	nom1	66	71.506	ENSPNAG00000011085	nom1	98	55.846	Pygocentrus_nattereri
ENSPREG00000008850	nom1	97	51.285	ENSRNOG00000048969	AABR07059041.1	99	51.523	Rattus_norvegicus
ENSPREG00000008850	nom1	97	53.902	ENSRBIG00000037042	NOM1	95	54.415	Rhinopithecus_bieti
ENSPREG00000008850	nom1	97	53.782	ENSRROG00000037293	NOM1	95	54.296	Rhinopithecus_roxellana
ENSPREG00000008850	nom1	50	61.743	ENSSHAG00000002835	-	99	61.743	Sarcophilus_harrisii
ENSPREG00000008850	nom1	66	67.459	ENSSHAG00000017998	-	99	60.201	Sarcophilus_harrisii
ENSPREG00000008850	nom1	59	71.811	ENSSFOG00015003196	nom1	100	71.811	Scleropages_formosus
ENSPREG00000008850	nom1	99	72.609	ENSSMAG00000011047	nom1	98	72.488	Scophthalmus_maximus
ENSPREG00000008850	nom1	100	73.740	ENSSDUG00000006834	nom1	100	74.323	Seriola_dumerili
ENSPREG00000008850	nom1	100	73.498	ENSSLDG00000021812	nom1	100	74.083	Seriola_lalandi_dorsalis
ENSPREG00000008850	nom1	86	47.333	ENSSPUG00000002556	NOM1	100	70.000	Sphenodon_punctatus
ENSPREG00000008850	nom1	100	74.914	ENSSPAG00000000953	nom1	100	74.108	Stegastes_partitus
ENSPREG00000008850	nom1	81	58.712	ENSTGUG00000000702	-	99	58.773	Taeniopygia_guttata
ENSPREG00000008850	nom1	98	68.111	ENSTRUG00000010239	nom1	98	69.891	Takifugu_rubripes
ENSPREG00000008850	nom1	98	69.240	ENSTNIG00000012783	nom1	99	70.064	Tetraodon_nigroviridis
ENSPREG00000008850	nom1	94	54.875	ENSTTRG00000009691	NOM1	95	53.064	Tursiops_truncatus
ENSPREG00000008850	nom1	97	52.600	ENSUAMG00000025450	NOM1	95	53.477	Ursus_americanus
ENSPREG00000008850	nom1	81	59.012	ENSUMAG00000014275	NOM1	96	58.866	Ursus_maritimus
ENSPREG00000008850	nom1	74	67.281	ENSVVUG00000002608	NOM1	95	67.281	Vulpes_vulpes
ENSPREG00000008850	nom1	86	54.388	ENSXETG00000021611	nom1	82	73.659	Xenopus_tropicalis
ENSPREG00000008850	nom1	100	94.365	ENSXMAG00000002451	nom1	100	93.525	Xiphophorus_maculatus