EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008911 (Gene tree)
Gene ID: 103468659
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 25822 bases
Position: chrLG8:16226668-16252489
Accession: 103468659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013174	zf-C2H2_jaz	PF12171.8	5.2e-06	1	1
ENSPREP00000013124	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSPREP00000013146	zf-C2H2_jaz	PF12171.8	5.3e-06	1	1
ENSPREP00000013113	zf-C2H2_jaz	PF12171.8	5.6e-06	1	1
ENSPREP00000013113	G-patch	PF01585.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013282	-	4441	XM_008415890	ENSPREP00000013146	1425 (aa)	XP_008414112	UPI0004A42EBC
ENSPRET00000013309	-	4386	XM_008415893	ENSPREP00000013174	1409 (aa)	XP_008414115	UPI0004A21962
ENSPRET00000013260	-	4459	XM_008415888	ENSPREP00000013124	1425 (aa)	XP_008414110	UPI0004A42EBC
ENSPRET00000013249	-	4467	XM_008415887	ENSPREP00000013113	1488 (aa)	XP_008414109	UPI0004A403E2

Gene Model

Click here to download ENSPREG00000008911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008911	gpatch8	100	82.267	ENSACIG00000012241	gpatch8	100	82.667	Amphilophus_citrinellus
ENSPREG00000008911	gpatch8	100	82.152	ENSACLG00000004165	gpatch8	100	82.353	Astatotilapia_calliptera
ENSPREG00000008911	gpatch8	56	65.366	ENSAMXG00000041683	gpatch8	56	60.265	Astyanax_mexicanus
ENSPREG00000008911	gpatch8	100	77.778	ENSCSEG00000021277	gpatch8	100	78.110	Cynoglossus_semilaevis
ENSPREG00000008911	gpatch8	100	88.503	ENSCVAG00000013477	gpatch8	100	88.570	Cyprinodon_variegatus
ENSPREG00000008911	gpatch8	61	59.072	ENSDARG00000059768	gpatch8	55	60.539	Danio_rerio
ENSPREG00000008911	gpatch8	53	46.823	ENSEBUG00000005749	gpatch8	69	47.386	Eptatretus_burgeri
ENSPREG00000008911	gpatch8	100	61.962	ENSELUG00000019920	gpatch8	56	62.900	Esox_lucius
ENSPREG00000008911	gpatch8	100	95.968	ENSGAFG00000018138	gpatch8	100	95.833	Gambusia_affinis
ENSPREG00000008911	gpatch8	100	81.855	ENSHBUG00000002669	gpatch8	100	82.322	Haplochromis_burtoni
ENSPREG00000008911	gpatch8	75	54.675	ENSHGLG00100010738	GPATCH8	64	61.983	Heterocephalus_glaber_male
ENSPREG00000008911	gpatch8	100	72.267	ENSHCOG00000017518	gpatch8	96	70.515	Hippocampus_comes
ENSPREG00000008911	gpatch8	59	59.586	ENSIPUG00000015431	gpatch8	55	60.071	Ictalurus_punctatus
ENSPREG00000008911	gpatch8	100	83.880	ENSKMAG00000018364	gpatch8	55	80.700	Kryptolebias_marmoratus
ENSPREG00000008911	gpatch8	100	79.933	ENSLBEG00000023352	gpatch8	100	80.000	Labrus_bergylta
ENSPREG00000008911	gpatch8	61	81.897	ENSLOCG00000012265	gpatch8	72	75.887	Lepisosteus_oculatus
ENSPREG00000008911	gpatch8	100	81.594	ENSMAMG00000001618	gpatch8	100	81.805	Mastacembelus_armatus
ENSPREG00000008911	gpatch8	100	82.086	ENSMZEG00005022584	gpatch8	100	82.286	Maylandia_zebra
ENSPREG00000008911	gpatch8	61	77.451	ENSMMOG00000020472	gpatch8	55	75.601	Mola_mola
ENSPREG00000008911	gpatch8	100	79.492	ENSMALG00000004204	gpatch8	55	75.875	Monopterus_albus
ENSPREG00000008911	gpatch8	50	63.006	ENSMLUG00000013840	GPATCH8	52	63.905	Myotis_lucifugus
ENSPREG00000008911	gpatch8	100	82.055	ENSNBRG00000016402	gpatch8	100	82.388	Neolamprologus_brichardi
ENSPREG00000008911	gpatch8	100	79.333	ENSONIG00000001292	gpatch8	100	81.304	Oreochromis_niloticus
ENSPREG00000008911	gpatch8	100	77.809	ENSORLG00000028497	gpatch8	56	74.700	Oryzias_latipes
ENSPREG00000008911	gpatch8	61	75.870	ENSORLG00020006656	gpatch8	56	73.981	Oryzias_latipes_hni
ENSPREG00000008911	gpatch8	61	76.413	ENSORLG00015019797	gpatch8	56	74.460	Oryzias_latipes_hsok
ENSPREG00000008911	gpatch8	61	51.717	ENSPKIG00000018753	gpatch8	56	52.347	Paramormyrops_kingsleyae
ENSPREG00000008911	gpatch8	56	55.319	ENSPKIG00000004860	GPATCH8	52	56.650	Paramormyrops_kingsleyae
ENSPREG00000008911	gpatch8	100	97.312	ENSPFOG00000014833	gpatch8	100	97.312	Poecilia_formosa
ENSPREG00000008911	gpatch8	100	97.177	ENSPLAG00000001035	gpatch8	100	97.177	Poecilia_latipinna
ENSPREG00000008911	gpatch8	100	97.110	ENSPMEG00000024032	gpatch8	100	97.110	Poecilia_mexicana
ENSPREG00000008911	gpatch8	100	82.286	ENSPNYG00000009426	gpatch8	100	82.487	Pundamilia_nyererei
ENSPREG00000008911	gpatch8	59	61.672	ENSPNAG00000016200	gpatch8	58	62.804	Pygocentrus_nattereri
ENSPREG00000008911	gpatch8	56	57.159	ENSSFOG00015004299	GPATCH8	55	56.958	Scleropages_formosus
ENSPREG00000008911	gpatch8	55	56.722	ENSSFOG00015021377	-	55	56.161	Scleropages_formosus
ENSPREG00000008911	gpatch8	100	82.552	ENSSDUG00000018065	gpatch8	100	82.483	Seriola_dumerili
ENSPREG00000008911	gpatch8	100	83.843	ENSSLDG00000009225	gpatch8	100	83.843	Seriola_lalandi_dorsalis
ENSPREG00000008911	gpatch8	100	83.957	ENSSPAG00000011368	gpatch8	100	84.024	Stegastes_partitus
ENSPREG00000008911	gpatch8	100	76.353	ENSTRUG00000020474	gpatch8	100	75.885	Takifugu_rubripes
ENSPREG00000008911	gpatch8	59	62.362	ENSTBEG00000009486	GPATCH8	56	61.993	Tupaia_belangeri
ENSPREG00000008911	gpatch8	100	95.244	ENSXCOG00000016680	gpatch8	100	95.378	Xiphophorus_couchianus
ENSPREG00000008911	gpatch8	100	95.439	ENSXMAG00000009217	gpatch8	100	95.573	Xiphophorus_maculatus