EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000008960 (Gene tree)
Gene ID: 103457381
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7153 bases
Position: chrLG21:11811659-11818811
Accession: 103457381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013231	Beta-Casp	PF10996.8	3e-21	1	1
ENSPREP00000013231	Lactamase_B	PF00753.27	4.3e-05	1	1
ENSPREP00000013231	RMMBL	PF07521.12	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013367	-	2374	XM_008397459	ENSPREP00000013231	787 (aa)	XP_008395681	UPI0004A43A65

Gene Model

Click here to download ENSPREG00000008960's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000008960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000008960	cpsf2	100	85.171	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSPREG00000008960	cpsf2	100	94.917	ENSAPOG00000001242	cpsf2	100	94.917	Acanthochromis_polyacanthus
ENSPREG00000008960	cpsf2	100	94.416	ENSACIG00000009331	cpsf2	100	94.416	Amphilophus_citrinellus
ENSPREG00000008960	cpsf2	100	95.553	ENSAOCG00000014095	cpsf2	100	95.553	Amphiprion_ocellaris
ENSPREG00000008960	cpsf2	100	95.553	ENSAPEG00000009158	cpsf2	100	95.553	Amphiprion_percula
ENSPREG00000008960	cpsf2	97	93.229	ENSATEG00000017644	cpsf2	99	92.785	Anabas_testudineus
ENSPREG00000008960	cpsf2	100	84.937	ENSAPLG00000006330	CPSF2	100	84.937	Anas_platyrhynchos
ENSPREG00000008960	cpsf2	100	85.044	ENSACAG00000009245	CPSF2	100	85.044	Anolis_carolinensis
ENSPREG00000008960	cpsf2	100	85.425	ENSANAG00000022915	CPSF2	100	85.425	Aotus_nancymaae
ENSPREG00000008960	cpsf2	100	89.100	ENSAMXG00000018696	cpsf2	100	89.100	Astyanax_mexicanus
ENSPREG00000008960	cpsf2	100	85.298	ENSBTAG00000010227	CPSF2	100	85.298	Bos_taurus
ENSPREG00000008960	cpsf2	100	42.488	WBGene00017313	cpsf-2	100	42.367	Caenorhabditis_elegans
ENSPREG00000008960	cpsf2	100	85.425	ENSCJAG00000018069	CPSF2	100	85.425	Callithrix_jacchus
ENSPREG00000008960	cpsf2	100	85.171	ENSCAFG00000010909	CPSF2	100	85.171	Canis_familiaris
ENSPREG00000008960	cpsf2	100	85.171	ENSCAFG00020020670	CPSF2	100	85.171	Canis_lupus_dingo
ENSPREG00000008960	cpsf2	100	85.298	ENSCHIG00000023848	CPSF2	100	85.298	Capra_hircus
ENSPREG00000008960	cpsf2	100	85.551	ENSTSYG00000009036	CPSF2	100	85.551	Carlito_syrichta
ENSPREG00000008960	cpsf2	100	85.298	ENSCPOG00000010899	CPSF2	100	85.298	Cavia_porcellus
ENSPREG00000008960	cpsf2	100	85.425	ENSCCAG00000028088	CPSF2	100	85.425	Cebus_capucinus
ENSPREG00000008960	cpsf2	100	85.298	ENSCATG00000030132	CPSF2	100	85.298	Cercocebus_atys
ENSPREG00000008960	cpsf2	100	85.425	ENSCLAG00000012404	CPSF2	100	85.425	Chinchilla_lanigera
ENSPREG00000008960	cpsf2	100	85.298	ENSCSAG00000011300	CPSF2	100	85.298	Chlorocebus_sabaeus
ENSPREG00000008960	cpsf2	100	79.721	ENSCHOG00000012904	CPSF2	100	79.721	Choloepus_hoffmanni
ENSPREG00000008960	cpsf2	100	85.298	ENSCPBG00000008766	CPSF2	97	85.298	Chrysemys_picta_bellii
ENSPREG00000008960	cpsf2	100	53.168	ENSCING00000007881	-	100	52.847	Ciona_intestinalis
ENSPREG00000008960	cpsf2	94	85.270	ENSCANG00000041651	CPSF2	100	85.250	Colobus_angolensis_palliatus
ENSPREG00000008960	cpsf2	100	85.551	ENSCGRG00001006901	Cpsf2	100	85.551	Cricetulus_griseus_chok1gshd
ENSPREG00000008960	cpsf2	100	85.551	ENSCGRG00000012416	Cpsf2	100	85.551	Cricetulus_griseus_crigri
ENSPREG00000008960	cpsf2	100	92.640	ENSCSEG00000004116	cpsf2	100	92.640	Cynoglossus_semilaevis
ENSPREG00000008960	cpsf2	100	97.840	ENSCVAG00000000095	cpsf2	100	97.840	Cyprinodon_variegatus
ENSPREG00000008960	cpsf2	100	87.722	ENSDARG00000028971	cpsf2	100	87.722	Danio_rerio
ENSPREG00000008960	cpsf2	100	85.298	ENSDNOG00000042757	CPSF2	100	85.298	Dasypus_novemcinctus
ENSPREG00000008960	cpsf2	100	85.298	ENSDORG00000013709	Cpsf2	100	85.298	Dipodomys_ordii
ENSPREG00000008960	cpsf2	100	53.646	FBgn0027873	Cpsf100	100	53.532	Drosophila_melanogaster
ENSPREG00000008960	cpsf2	100	77.722	ENSETEG00000012123	CPSF2	100	77.722	Echinops_telfairi
ENSPREG00000008960	cpsf2	52	76.284	ENSEBUG00000012098	cpsf2	93	76.284	Eptatretus_burgeri
ENSPREG00000008960	cpsf2	89	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSPREG00000008960	cpsf2	100	85.171	ENSECAG00000023935	CPSF2	100	85.171	Equus_caballus
ENSPREG00000008960	cpsf2	100	88.945	ENSELUG00000008442	cpsf2	100	88.945	Esox_lucius
ENSPREG00000008960	cpsf2	100	85.171	ENSFCAG00000007886	CPSF2	100	85.171	Felis_catus
ENSPREG00000008960	cpsf2	100	85.279	ENSFALG00000002412	CPSF2	100	85.279	Ficedula_albicollis
ENSPREG00000008960	cpsf2	100	85.171	ENSFDAG00000006327	CPSF2	100	85.171	Fukomys_damarensis
ENSPREG00000008960	cpsf2	96	96.723	ENSFHEG00000015465	cpsf2	98	96.723	Fundulus_heteroclitus
ENSPREG00000008960	cpsf2	100	89.646	ENSGMOG00000008761	cpsf2	100	89.646	Gadus_morhua
ENSPREG00000008960	cpsf2	100	85.533	ENSGALG00000010783	CPSF2	100	85.533	Gallus_gallus
ENSPREG00000008960	cpsf2	100	98.729	ENSGAFG00000001407	cpsf2	100	98.729	Gambusia_affinis
ENSPREG00000008960	cpsf2	100	94.536	ENSGACG00000008418	cpsf2	100	94.536	Gasterosteus_aculeatus
ENSPREG00000008960	cpsf2	100	85.171	ENSGAGG00000008287	CPSF2	100	85.171	Gopherus_agassizii
ENSPREG00000008960	cpsf2	100	85.171	ENSGGOG00000011799	CPSF2	100	85.171	Gorilla_gorilla
ENSPREG00000008960	cpsf2	100	93.139	ENSHBUG00000023466	cpsf2	100	93.139	Haplochromis_burtoni
ENSPREG00000008960	cpsf2	100	85.298	ENSHGLG00000018311	CPSF2	100	85.298	Heterocephalus_glaber_female
ENSPREG00000008960	cpsf2	100	85.298	ENSHGLG00100016460	CPSF2	100	85.298	Heterocephalus_glaber_male
ENSPREG00000008960	cpsf2	100	92.884	ENSHCOG00000019527	cpsf2	98	92.884	Hippocampus_comes
ENSPREG00000008960	cpsf2	100	89.100	ENSIPUG00000020857	cpsf2	100	89.100	Ictalurus_punctatus
ENSPREG00000008960	cpsf2	100	85.425	ENSSTOG00000009528	CPSF2	100	85.425	Ictidomys_tridecemlineatus
ENSPREG00000008960	cpsf2	100	85.044	ENSJJAG00000017925	Cpsf2	100	85.044	Jaculus_jaculus
ENSPREG00000008960	cpsf2	100	95.172	ENSKMAG00000019429	cpsf2	100	95.172	Kryptolebias_marmoratus
ENSPREG00000008960	cpsf2	95	93.432	ENSLBEG00000011585	cpsf2	100	93.432	Labrus_bergylta
ENSPREG00000008960	cpsf2	100	83.376	ENSLACG00000019024	CPSF2	100	83.650	Latimeria_chalumnae
ENSPREG00000008960	cpsf2	100	88.734	ENSLOCG00000014102	cpsf2	100	88.734	Lepisosteus_oculatus
ENSPREG00000008960	cpsf2	100	84.956	ENSLAFG00000004891	CPSF2	100	84.956	Loxodonta_africana
ENSPREG00000008960	cpsf2	100	85.298	ENSMFAG00000041212	CPSF2	100	85.298	Macaca_fascicularis
ENSPREG00000008960	cpsf2	100	85.298	ENSMMUG00000000699	CPSF2	100	85.298	Macaca_mulatta
ENSPREG00000008960	cpsf2	100	85.298	ENSMNEG00000031584	CPSF2	100	85.298	Macaca_nemestrina
ENSPREG00000008960	cpsf2	100	85.298	ENSMLEG00000029394	CPSF2	100	85.298	Mandrillus_leucophaeus
ENSPREG00000008960	cpsf2	100	95.044	ENSMAMG00000004235	cpsf2	100	95.044	Mastacembelus_armatus
ENSPREG00000008960	cpsf2	100	93.266	ENSMZEG00005001769	cpsf2	100	93.266	Maylandia_zebra
ENSPREG00000008960	cpsf2	100	85.298	ENSMGAG00000013122	CPSF2	100	85.298	Meleagris_gallopavo
ENSPREG00000008960	cpsf2	100	85.551	ENSMAUG00000015160	Cpsf2	100	85.551	Mesocricetus_auratus
ENSPREG00000008960	cpsf2	100	85.298	ENSMICG00000016441	CPSF2	100	85.298	Microcebus_murinus
ENSPREG00000008960	cpsf2	100	85.298	ENSMOCG00000015372	Cpsf2	100	85.298	Microtus_ochrogaster
ENSPREG00000008960	cpsf2	100	87.929	ENSMMOG00000015590	cpsf2	100	87.929	Mola_mola
ENSPREG00000008960	cpsf2	100	85.551	ENSMODG00000002042	CPSF2	100	85.551	Monodelphis_domestica
ENSPREG00000008960	cpsf2	100	91.233	ENSMALG00000022275	cpsf2	100	91.233	Monopterus_albus
ENSPREG00000008960	cpsf2	100	85.298	ENSMUSG00000041781	Cpsf2	100	85.298	Mus_musculus
ENSPREG00000008960	cpsf2	100	85.171	MGP_PahariEiJ_G0029791	Cpsf2	100	85.171	Mus_pahari
ENSPREG00000008960	cpsf2	100	85.298	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.298	Mus_spretus
ENSPREG00000008960	cpsf2	100	85.298	ENSMPUG00000007617	CPSF2	98	85.298	Mustela_putorius_furo
ENSPREG00000008960	cpsf2	100	85.044	ENSMLUG00000005570	CPSF2	100	85.044	Myotis_lucifugus
ENSPREG00000008960	cpsf2	100	85.044	ENSNGAG00000020312	Cpsf2	100	85.044	Nannospalax_galili
ENSPREG00000008960	cpsf2	100	93.647	ENSNBRG00000022402	cpsf2	100	93.647	Neolamprologus_brichardi
ENSPREG00000008960	cpsf2	100	84.664	ENSNLEG00000017132	CPSF2	100	84.664	Nomascus_leucogenys
ENSPREG00000008960	cpsf2	91	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSPREG00000008960	cpsf2	94	81.030	ENSOPRG00000008484	-	100	81.030	Ochotona_princeps
ENSPREG00000008960	cpsf2	100	85.044	ENSODEG00000008682	CPSF2	100	85.044	Octodon_degus
ENSPREG00000008960	cpsf2	100	93.393	ENSONIG00000005901	cpsf2	100	93.393	Oreochromis_niloticus
ENSPREG00000008960	cpsf2	100	85.171	ENSOANG00000003822	CPSF2	100	85.171	Ornithorhynchus_anatinus
ENSPREG00000008960	cpsf2	100	85.044	ENSOCUG00000005713	CPSF2	100	85.044	Oryctolagus_cuniculus
ENSPREG00000008960	cpsf2	100	88.564	ENSORLG00000011628	cpsf2	100	88.564	Oryzias_latipes
ENSPREG00000008960	cpsf2	100	94.409	ENSORLG00020016980	cpsf2	100	94.409	Oryzias_latipes_hni
ENSPREG00000008960	cpsf2	100	94.409	ENSORLG00015011910	cpsf2	100	94.409	Oryzias_latipes_hsok
ENSPREG00000008960	cpsf2	100	94.543	ENSOMEG00000022876	cpsf2	100	94.543	Oryzias_melastigma
ENSPREG00000008960	cpsf2	100	82.301	ENSOARG00000012889	CPSF2	100	82.301	Ovis_aries
ENSPREG00000008960	cpsf2	100	85.171	ENSPPAG00000039666	CPSF2	100	85.171	Pan_paniscus
ENSPREG00000008960	cpsf2	99	85.152	ENSPPRG00000010869	CPSF2	100	85.152	Panthera_pardus
ENSPREG00000008960	cpsf2	100	85.171	ENSPTIG00000021202	CPSF2	100	85.171	Panthera_tigris_altaica
ENSPREG00000008960	cpsf2	100	85.171	ENSPTRG00000006651	CPSF2	100	85.171	Pan_troglodytes
ENSPREG00000008960	cpsf2	100	85.298	ENSPANG00000017417	CPSF2	100	85.298	Papio_anubis
ENSPREG00000008960	cpsf2	100	85.171	ENSPKIG00000021453	cpsf2	100	85.171	Paramormyrops_kingsleyae
ENSPREG00000008960	cpsf2	100	84.791	ENSPSIG00000006289	CPSF2	100	84.791	Pelodiscus_sinensis
ENSPREG00000008960	cpsf2	76	86.356	ENSPMGG00000002511	cpsf2	99	87.375	Periophthalmus_magnuspinnatus
ENSPREG00000008960	cpsf2	100	85.425	ENSPEMG00000007917	Cpsf2	100	85.425	Peromyscus_maniculatus_bairdii
ENSPREG00000008960	cpsf2	100	72.271	ENSPMAG00000006205	cpsf2	100	72.659	Petromyzon_marinus
ENSPREG00000008960	cpsf2	100	85.551	ENSPCIG00000011393	CPSF2	100	85.551	Phascolarctos_cinereus
ENSPREG00000008960	cpsf2	100	98.983	ENSPFOG00000018648	cpsf2	100	98.983	Poecilia_formosa
ENSPREG00000008960	cpsf2	100	98.983	ENSPLAG00000019199	cpsf2	99	98.983	Poecilia_latipinna
ENSPREG00000008960	cpsf2	96	99.075	ENSPMEG00000012100	cpsf2	100	98.928	Poecilia_mexicana
ENSPREG00000008960	cpsf2	64	81.113	ENSPPYG00000029685	-	100	81.113	Pongo_abelii
ENSPREG00000008960	cpsf2	100	85.171	ENSPCAG00000012477	CPSF2	100	85.171	Procavia_capensis
ENSPREG00000008960	cpsf2	100	85.298	ENSPCOG00000026387	CPSF2	100	85.298	Propithecus_coquereli
ENSPREG00000008960	cpsf2	64	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSPREG00000008960	cpsf2	100	92.893	ENSPNYG00000023356	cpsf2	100	92.893	Pundamilia_nyererei
ENSPREG00000008960	cpsf2	100	90.241	ENSPNAG00000001849	cpsf2	100	90.241	Pygocentrus_nattereri
ENSPREG00000008960	cpsf2	100	85.298	ENSRNOG00000005733	Cpsf2	100	85.298	Rattus_norvegicus
ENSPREG00000008960	cpsf2	100	85.298	ENSRBIG00000044792	CPSF2	100	85.298	Rhinopithecus_bieti
ENSPREG00000008960	cpsf2	100	85.298	ENSRROG00000034875	CPSF2	100	85.298	Rhinopithecus_roxellana
ENSPREG00000008960	cpsf2	100	85.425	ENSSBOG00000024571	CPSF2	100	85.425	Saimiri_boliviensis_boliviensis
ENSPREG00000008960	cpsf2	100	85.425	ENSSHAG00000010458	CPSF2	100	85.425	Sarcophilus_harrisii
ENSPREG00000008960	cpsf2	100	90.368	ENSSFOG00015002117	cpsf2	100	90.494	Scleropages_formosus
ENSPREG00000008960	cpsf2	100	93.020	ENSSMAG00000002001	cpsf2	100	93.782	Scophthalmus_maximus
ENSPREG00000008960	cpsf2	100	95.172	ENSSDUG00000004084	cpsf2	100	95.172	Seriola_dumerili
ENSPREG00000008960	cpsf2	100	94.917	ENSSLDG00000024330	cpsf2	100	94.917	Seriola_lalandi_dorsalis
ENSPREG00000008960	cpsf2	58	93.069	ENSSARG00000009784	-	63	93.069	Sorex_araneus
ENSPREG00000008960	cpsf2	100	85.171	ENSSPUG00000013485	CPSF2	100	85.171	Sphenodon_punctatus
ENSPREG00000008960	cpsf2	100	94.663	ENSSPAG00000013284	cpsf2	100	94.663	Stegastes_partitus
ENSPREG00000008960	cpsf2	100	85.044	ENSSSCG00000002447	CPSF2	100	85.044	Sus_scrofa
ENSPREG00000008960	cpsf2	100	85.406	ENSTGUG00000012571	-	100	85.406	Taeniopygia_guttata
ENSPREG00000008960	cpsf2	100	92.630	ENSTRUG00000003742	cpsf2	100	92.630	Takifugu_rubripes
ENSPREG00000008960	cpsf2	100	91.001	ENSTNIG00000012228	cpsf2	100	92.015	Tetraodon_nigroviridis
ENSPREG00000008960	cpsf2	91	83.478	ENSTBEG00000004530	CPSF2	94	83.478	Tupaia_belangeri
ENSPREG00000008960	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSPREG00000008960	cpsf2	100	85.298	ENSUAMG00000028071	CPSF2	100	85.298	Ursus_americanus
ENSPREG00000008960	cpsf2	100	85.298	ENSUMAG00000005029	CPSF2	99	89.614	Ursus_maritimus
ENSPREG00000008960	cpsf2	99	85.152	ENSVPAG00000003503	CPSF2	100	85.152	Vicugna_pacos
ENSPREG00000008960	cpsf2	100	85.171	ENSVVUG00000024642	CPSF2	100	85.171	Vulpes_vulpes
ENSPREG00000008960	cpsf2	100	84.157	ENSXETG00000010289	cpsf2	100	84.157	Xenopus_tropicalis
ENSPREG00000008960	cpsf2	100	98.094	ENSXCOG00000001764	cpsf2	100	98.094	Xiphophorus_couchianus
ENSPREG00000008960	cpsf2	100	98.729	ENSXMAG00000017048	cpsf2	100	98.729	Xiphophorus_maculatus