EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009009 (Gene tree)
Gene ID: 103468656
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3688 bases
Position: chrLG8:16277372-16281059
Accession: 103468656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013265	MMR_HSR1	PF01926.23	4.1e-05	1	1
ENSPREP00000013262	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013398	-	552	-	ENSPREP00000013262	183 (aa)	-	-
ENSPRET00000013401	-	553	XM_008415884	ENSPREP00000013265	180 (aa)	XP_008414106	UPI000293BBB7

Gene Model

Click here to download ENSPREG00000009009's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009009	-	100	92.265	ENSPREG00000020988	-	100	92.265
ENSPREG00000009009	-	55	37.374	ENSPREG00000002020	-	73	37.374
ENSPREG00000009009	-	94	47.727	ENSPREG00000001895	-	85	47.727
ENSPREG00000009009	-	93	44.910	ENSPREG00000003600	arl3l2	89	44.910
ENSPREG00000009009	-	97	49.143	ENSPREG00000008262	arl8	98	49.143
ENSPREG00000009009	-	99	91.061	ENSPREG00000007723	-	99	91.061
ENSPREG00000009009	-	93	44.910	ENSPREG00000014738	-	89	45.122
ENSPREG00000009009	-	96	31.609	ENSPREG00000004992	arl8a	93	31.609
ENSPREG00000009009	-	98	38.119	ENSPREG00000013042	-	93	38.119
ENSPREG00000009009	-	94	35.165	ENSPREG00000019667	arfrp1	89	35.165
ENSPREG00000009009	-	96	47.977	ENSPREG00000020490	arl2	93	47.977
ENSPREG00000009009	-	91	42.604	ENSPREG00000001976	arl14	84	42.604
ENSPREG00000009009	-	99	42.077	ENSPREG00000021943	ARL6	99	42.077
ENSPREG00000009009	-	92	33.133	ENSPREG00000021315	arl8bb	89	33.133
ENSPREG00000009009	-	98	50.000	ENSPREG00000008730	arl5c	98	50.000
ENSPREG00000009009	-	92	33.735	ENSPREG00000004191	arl8ba	89	33.735
ENSPREG00000009009	-	84	48.344	ENSPREG00000003821	arl3	67	48.344
ENSPREG00000009009	-	95	67.816	ENSPREG00000000912	-	100	67.816
ENSPREG00000009009	-	90	52.469	ENSPREG00000002806	arl5a	62	52.469
ENSPREG00000009009	-	88	47.273	ENSPREG00000021699	-	85	47.273
ENSPREG00000009009	-	87	44.444	ENSPREG00000011615	arl4d	81	44.444
ENSPREG00000009009	-	97	31.383	ENSPREG00000016098	sar1ab	96	30.890
ENSPREG00000009009	-	98	59.322	ENSPREG00000013361	arl1	95	59.322
ENSPREG00000009009	-	100	92.265	ENSPREG00000012688	arf3b	100	92.265
ENSPREG00000009009	-	82	46.622	ENSPREG00000010815	arl11	93	46.622
ENSPREG00000009009	-	96	47.191	ENSPREG00000015645	arl4cb	90	47.191
ENSPREG00000009009	-	88	31.579	ENSPREG00000001449	srprb	66	31.579
ENSPREG00000009009	-	100	92.818	ENSPREG00000008632	arf2b	100	92.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009009	-	100	96.111	ENSACIG00000012192	-	100	96.111	Amphilophus_citrinellus
ENSPREG00000009009	-	84	98.013	ENSAOCG00000001275	-	88	98.013	Amphiprion_ocellaris
ENSPREG00000009009	-	100	97.778	ENSAPEG00000016909	-	100	97.778	Amphiprion_percula
ENSPREG00000009009	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSPREG00000009009	-	100	96.111	ENSACLG00000004123	-	100	96.111	Astatotilapia_calliptera
ENSPREG00000009009	-	100	92.818	ENSAMXG00000019845	arf1	100	92.818	Astyanax_mexicanus
ENSPREG00000009009	-	100	100.000	ENSCVAG00000013374	-	100	100.000	Cyprinodon_variegatus
ENSPREG00000009009	-	100	92.818	ENSDARG00000009484	arf1	100	92.818	Danio_rerio
ENSPREG00000009009	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSPREG00000009009	-	100	99.444	ENSFHEG00000005859	-	100	99.444	Fundulus_heteroclitus
ENSPREG00000009009	-	96	88.439	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSPREG00000009009	-	100	100.000	ENSGAFG00000018151	-	100	100.000	Gambusia_affinis
ENSPREG00000009009	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSPREG00000009009	-	100	96.111	ENSHBUG00000002636	-	100	96.111	Haplochromis_burtoni
ENSPREG00000009009	-	100	92.265	ENSIPUG00000006311	arf1	100	92.265	Ictalurus_punctatus
ENSPREG00000009009	-	100	95.000	ENSKMAG00000018315	-	100	95.000	Kryptolebias_marmoratus
ENSPREG00000009009	-	99	88.764	ENSLBEG00000023263	-	100	87.432	Labrus_bergylta
ENSPREG00000009009	-	99	89.385	ENSLBEG00000001998	arf1	99	89.385	Labrus_bergylta
ENSPREG00000009009	-	100	98.333	ENSMAMG00000001553	-	100	98.333	Mastacembelus_armatus
ENSPREG00000009009	-	100	96.111	ENSMZEG00005022594	-	100	96.111	Maylandia_zebra
ENSPREG00000009009	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSPREG00000009009	-	100	96.111	ENSNBRG00000016455	-	100	96.111	Neolamprologus_brichardi
ENSPREG00000009009	-	100	96.111	ENSONIG00000001286	-	100	96.111	Oreochromis_niloticus
ENSPREG00000009009	-	100	97.222	ENSORLG00000023270	-	100	97.222	Oryzias_latipes
ENSPREG00000009009	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSPREG00000009009	-	100	97.222	ENSORLG00015019836	-	100	97.222	Oryzias_latipes_hsok
ENSPREG00000009009	-	100	97.222	ENSOMEG00000023784	-	100	97.222	Oryzias_melastigma
ENSPREG00000009009	-	100	88.950	ENSPMGG00000014174	arf1	98	91.176	Periophthalmus_magnuspinnatus
ENSPREG00000009009	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSPREG00000009009	-	100	100.000	ENSPFOG00000014787	-	100	100.000	Poecilia_formosa
ENSPREG00000009009	-	100	100.000	ENSPLAG00000001041	-	100	100.000	Poecilia_latipinna
ENSPREG00000009009	-	100	100.000	ENSPMEG00000024077	-	100	100.000	Poecilia_mexicana
ENSPREG00000009009	-	100	96.111	ENSPNYG00000009472	-	100	96.111	Pundamilia_nyererei
ENSPREG00000009009	-	94	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSPREG00000009009	-	99	76.667	YDL192W	-	99	76.667	Saccharomyces_cerevisiae
ENSPREG00000009009	-	99	75.978	YDL137W	-	99	75.978	Saccharomyces_cerevisiae
ENSPREG00000009009	-	100	91.111	ENSSMAG00000006125	-	100	91.111	Scophthalmus_maximus
ENSPREG00000009009	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSPREG00000009009	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSPREG00000009009	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSPREG00000009009	-	100	95.000	ENSTRUG00000019870	-	100	95.000	Takifugu_rubripes
ENSPREG00000009009	-	100	93.333	ENSTNIG00000011685	-	100	93.333	Tetraodon_nigroviridis
ENSPREG00000009009	-	100	100.000	ENSXCOG00000016687	-	100	99.454	Xiphophorus_couchianus
ENSPREG00000009009	-	100	100.000	ENSXMAG00000009193	-	100	100.000	Xiphophorus_maculatus