EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000009176 (Gene tree)
Gene ID: 103465212
Gene Symbol: thumpd3
Alias: -
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 26048 bases
Position: chrLG5:23478344-23504391
Accession: 103465212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013484	THUMP	PF02926.17	2.6e-11	1	1
ENSPREP00000013497	THUMP	PF02926.17	3.2e-11	1	1
ENSPREP00000013484	UPF0020	PF01170.18	2.4e-40	1	1
ENSPREP00000013497	UPF0020	PF01170.18	3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013634	-	1635	-	ENSPREP00000013497	544 (aa)	-	-
ENSPRET00000013621	-	4823	XM_008409845	ENSPREP00000013484	501 (aa)	XP_008408067	UPI0004A2F57D

Gene Model

Click here to download ENSPREG00000009176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009176	thumpd3	97	56.375	ENSG00000134077	THUMPD3	97	56.375	Homo_sapiens
ENSPREG00000009176	thumpd3	98	84.458	ENSAPOG00000015836	thumpd3	99	84.458	Acanthochromis_polyacanthus
ENSPREG00000009176	thumpd3	97	55.534	ENSAMEG00000011321	THUMPD3	99	56.385	Ailuropoda_melanoleuca
ENSPREG00000009176	thumpd3	99	83.000	ENSACIG00000020096	thumpd3	99	83.000	Amphilophus_citrinellus
ENSPREG00000009176	thumpd3	99	83.000	ENSAOCG00000004399	thumpd3	99	83.000	Amphiprion_ocellaris
ENSPREG00000009176	thumpd3	99	83.400	ENSAPEG00000016740	thumpd3	99	83.400	Amphiprion_percula
ENSPREG00000009176	thumpd3	96	83.195	ENSATEG00000005345	thumpd3	97	82.988	Anabas_testudineus
ENSPREG00000009176	thumpd3	76	62.500	ENSAPLG00000003598	THUMPD3	99	63.010	Anas_platyrhynchos
ENSPREG00000009176	thumpd3	94	58.858	ENSACAG00000014974	THUMPD3	98	58.858	Anolis_carolinensis
ENSPREG00000009176	thumpd3	97	54.941	ENSANAG00000002365	THUMPD3	98	56.375	Aotus_nancymaae
ENSPREG00000009176	thumpd3	83	57.108	ENSACLG00000013504	-	87	57.108	Astatotilapia_calliptera
ENSPREG00000009176	thumpd3	99	81.800	ENSACLG00000023333	thumpd3	99	81.800	Astatotilapia_calliptera
ENSPREG00000009176	thumpd3	93	69.677	ENSAMXG00000015683	thumpd3	98	69.677	Astyanax_mexicanus
ENSPREG00000009176	thumpd3	95	58.954	ENSBTAG00000003112	THUMPD3	98	58.954	Bos_taurus
ENSPREG00000009176	thumpd3	85	36.449	WBGene00010846	M04B2.2	96	36.682	Caenorhabditis_elegans
ENSPREG00000009176	thumpd3	97	54.941	ENSCJAG00000015949	THUMPD3	98	55.777	Callithrix_jacchus
ENSPREG00000009176	thumpd3	73	57.474	ENSCAFG00000008060	-	93	58.656	Canis_familiaris
ENSPREG00000009176	thumpd3	88	59.219	ENSCAFG00000005499	THUMPD3	90	60.217	Canis_familiaris
ENSPREG00000009176	thumpd3	78	58.596	ENSCAFG00020025887	-	94	59.709	Canis_lupus_dingo
ENSPREG00000009176	thumpd3	88	59.219	ENSCAFG00020008895	-	90	60.217	Canis_lupus_dingo
ENSPREG00000009176	thumpd3	97	58.103	ENSCHIG00000024037	THUMPD3	98	58.103	Capra_hircus
ENSPREG00000009176	thumpd3	93	55.647	ENSTSYG00000000159	THUMPD3	94	57.380	Carlito_syrichta
ENSPREG00000009176	thumpd3	85	41.163	ENSCAPG00000017486	THUMPD3	84	40.961	Cavia_aperea
ENSPREG00000009176	thumpd3	90	58.672	ENSCPOG00000033287	THUMPD3	92	58.672	Cavia_porcellus
ENSPREG00000009176	thumpd3	93	50.515	ENSCCAG00000021429	-	94	52.070	Cebus_capucinus
ENSPREG00000009176	thumpd3	97	55.138	ENSCCAG00000027067	-	98	56.175	Cebus_capucinus
ENSPREG00000009176	thumpd3	97	55.336	ENSCATG00000040999	THUMPD3	98	56.375	Cercocebus_atys
ENSPREG00000009176	thumpd3	89	59.565	ENSCLAG00000000690	THUMPD3	91	59.565	Chinchilla_lanigera
ENSPREG00000009176	thumpd3	97	54.724	ENSCSAG00000010753	THUMPD3	98	56.773	Chlorocebus_sabaeus
ENSPREG00000009176	thumpd3	77	48.462	ENSCHOG00000012851	THUMPD3	76	48.846	Choloepus_hoffmanni
ENSPREG00000009176	thumpd3	90	60.084	ENSCPBG00000014771	THUMPD3	93	60.714	Chrysemys_picta_bellii
ENSPREG00000009176	thumpd3	88	41.723	ENSCSAVG00000008668	-	97	41.723	Ciona_savignyi
ENSPREG00000009176	thumpd3	97	54.331	ENSCANG00000031901	THUMPD3	98	56.375	Colobus_angolensis_palliatus
ENSPREG00000009176	thumpd3	88	60.000	ENSCGRG00001024117	Thumpd3	90	59.780	Cricetulus_griseus_chok1gshd
ENSPREG00000009176	thumpd3	88	60.000	ENSCGRG00000018116	Thumpd3	90	59.780	Cricetulus_griseus_crigri
ENSPREG00000009176	thumpd3	94	77.660	ENSCSEG00000002546	thumpd3	99	74.950	Cynoglossus_semilaevis
ENSPREG00000009176	thumpd3	99	85.571	ENSCVAG00000001019	thumpd3	98	85.571	Cyprinodon_variegatus
ENSPREG00000009176	thumpd3	93	66.526	ENSDARG00000059634	thumpd3	98	67.368	Danio_rerio
ENSPREG00000009176	thumpd3	88	60.613	ENSDNOG00000047668	THUMPD3	88	60.613	Dasypus_novemcinctus
ENSPREG00000009176	thumpd3	87	59.870	ENSDORG00000003257	Thumpd3	93	59.072	Dipodomys_ordii
ENSPREG00000009176	thumpd3	58	52.997	ENSETEG00000020239	-	60	54.662	Echinops_telfairi
ENSPREG00000009176	thumpd3	86	53.034	ENSEBUG00000004221	thumpd3	97	53.034	Eptatretus_burgeri
ENSPREG00000009176	thumpd3	90	57.537	ENSEASG00005013327	THUMPD3	92	58.635	Equus_asinus_asinus
ENSPREG00000009176	thumpd3	90	59.660	ENSECAG00000002016	THUMPD3	92	60.768	Equus_caballus
ENSPREG00000009176	thumpd3	95	52.632	ENSEEUG00000014696	THUMPD3	98	53.036	Erinaceus_europaeus
ENSPREG00000009176	thumpd3	92	84.669	ENSELUG00000018246	thumpd3	83	78.750	Esox_lucius
ENSPREG00000009176	thumpd3	88	60.659	ENSFCAG00000006171	THUMPD3	90	60.659	Felis_catus
ENSPREG00000009176	thumpd3	83	58.219	ENSFALG00000013631	THUMPD3	91	58.676	Ficedula_albicollis
ENSPREG00000009176	thumpd3	91	58.936	ENSFDAG00000014825	THUMPD3	92	58.936	Fukomys_damarensis
ENSPREG00000009176	thumpd3	99	87.400	ENSFHEG00000006006	thumpd3	99	87.400	Fundulus_heteroclitus
ENSPREG00000009176	thumpd3	96	68.182	ENSGMOG00000007923	thumpd3	98	68.802	Gadus_morhua
ENSPREG00000009176	thumpd3	87	59.442	ENSGALG00000044813	THUMPD3	94	60.300	Gallus_gallus
ENSPREG00000009176	thumpd3	100	95.808	ENSGAFG00000021645	thumpd3	100	95.808	Gambusia_affinis
ENSPREG00000009176	thumpd3	94	80.213	ENSGACG00000000930	thumpd3	99	80.000	Gasterosteus_aculeatus
ENSPREG00000009176	thumpd3	90	59.874	ENSGAGG00000022750	THUMPD3	93	61.229	Gopherus_agassizii
ENSPREG00000009176	thumpd3	97	56.375	ENSGGOG00000000604	THUMPD3	97	56.375	Gorilla_gorilla
ENSPREG00000009176	thumpd3	99	81.400	ENSHBUG00000013405	thumpd3	99	81.400	Haplochromis_burtoni
ENSPREG00000009176	thumpd3	89	58.824	ENSHGLG00000016200	THUMPD3	91	58.824	Heterocephalus_glaber_female
ENSPREG00000009176	thumpd3	89	57.974	ENSHGLG00100017321	-	91	58.913	Heterocephalus_glaber_male
ENSPREG00000009176	thumpd3	87	52.349	ENSHGLG00100000505	-	92	52.349	Heterocephalus_glaber_male
ENSPREG00000009176	thumpd3	93	77.039	ENSHCOG00000004871	thumpd3	97	77.730	Hippocampus_comes
ENSPREG00000009176	thumpd3	90	71.681	ENSIPUG00000019415	THUMPD3	92	71.681	Ictalurus_punctatus
ENSPREG00000009176	thumpd3	92	58.650	ENSSTOG00000003973	THUMPD3	94	58.650	Ictidomys_tridecemlineatus
ENSPREG00000009176	thumpd3	92	52.421	ENSJJAG00000017751	Thumpd3	92	53.277	Jaculus_jaculus
ENSPREG00000009176	thumpd3	99	80.200	ENSKMAG00000021025	thumpd3	94	80.240	Kryptolebias_marmoratus
ENSPREG00000009176	thumpd3	99	82.000	ENSLBEG00000012252	thumpd3	99	82.000	Labrus_bergylta
ENSPREG00000009176	thumpd3	93	59.006	ENSLACG00000018604	THUMPD3	95	58.848	Latimeria_chalumnae
ENSPREG00000009176	thumpd3	92	62.926	ENSLOCG00000009800	thumpd3	94	65.875	Lepisosteus_oculatus
ENSPREG00000009176	thumpd3	89	60.217	ENSLAFG00000005103	THUMPD3	92	59.914	Loxodonta_africana
ENSPREG00000009176	thumpd3	94	55.578	ENSMFAG00000044884	THUMPD3	96	57.700	Macaca_fascicularis
ENSPREG00000009176	thumpd3	94	55.578	ENSMMUG00000017307	THUMPD3	96	57.700	Macaca_mulatta
ENSPREG00000009176	thumpd3	94	55.578	ENSMNEG00000030529	THUMPD3	96	57.700	Macaca_nemestrina
ENSPREG00000009176	thumpd3	97	56.574	ENSMLEG00000032943	THUMPD3	98	56.175	Mandrillus_leucophaeus
ENSPREG00000009176	thumpd3	94	81.316	ENSMAMG00000023934	thumpd3	99	78.000	Mastacembelus_armatus
ENSPREG00000009176	thumpd3	99	81.800	ENSMZEG00005010623	thumpd3	99	81.800	Maylandia_zebra
ENSPREG00000009176	thumpd3	77	59.036	ENSMGAG00000010182	THUMPD3	100	61.481	Meleagris_gallopavo
ENSPREG00000009176	thumpd3	91	60.000	ENSMAUG00000012250	Thumpd3	92	60.000	Mesocricetus_auratus
ENSPREG00000009176	thumpd3	93	55.357	ENSMICG00000010095	THUMPD3	95	55.556	Microcebus_murinus
ENSPREG00000009176	thumpd3	88	60.440	ENSMOCG00000020148	Thumpd3	90	60.440	Microtus_ochrogaster
ENSPREG00000009176	thumpd3	99	77.355	ENSMMOG00000021791	thumpd3	99	80.127	Mola_mola
ENSPREG00000009176	thumpd3	96	55.534	ENSMODG00000004715	-	99	55.731	Monodelphis_domestica
ENSPREG00000009176	thumpd3	95	81.857	ENSMALG00000017316	thumpd3	99	81.646	Monopterus_albus
ENSPREG00000009176	thumpd3	53	56.786	MGP_CAROLIEiJ_G0028714	-	58	56.429	Mus_caroli
ENSPREG00000009176	thumpd3	90	59.743	ENSMUSG00000030264	Thumpd3	92	59.529	Mus_musculus
ENSPREG00000009176	thumpd3	90	59.529	MGP_PahariEiJ_G0022465	Thumpd3	92	59.315	Mus_pahari
ENSPREG00000009176	thumpd3	90	59.743	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.529	Mus_spretus
ENSPREG00000009176	thumpd3	97	56.175	ENSMPUG00000017066	-	98	56.972	Mustela_putorius_furo
ENSPREG00000009176	thumpd3	93	52.411	ENSMPUG00000005219	-	99	52.419	Mustela_putorius_furo
ENSPREG00000009176	thumpd3	96	56.634	ENSMLUG00000008538	THUMPD3	98	56.832	Myotis_lucifugus
ENSPREG00000009176	thumpd3	94	56.548	ENSNGAG00000021014	-	97	57.545	Nannospalax_galili
ENSPREG00000009176	thumpd3	94	48.643	ENSNGAG00000001549	-	97	48.434	Nannospalax_galili
ENSPREG00000009176	thumpd3	99	81.200	ENSNBRG00000004886	thumpd3	99	81.200	Neolamprologus_brichardi
ENSPREG00000009176	thumpd3	97	55.336	ENSNLEG00000003863	THUMPD3	98	56.175	Nomascus_leucogenys
ENSPREG00000009176	thumpd3	81	58.134	ENSMEUG00000009819	THUMPD3	99	58.373	Notamacropus_eugenii
ENSPREG00000009176	thumpd3	81	59.427	ENSOPRG00000002020	THUMPD3	99	59.145	Ochotona_princeps
ENSPREG00000009176	thumpd3	68	56.111	ENSODEG00000018242	THUMPD3	100	57.303	Octodon_degus
ENSPREG00000009176	thumpd3	99	82.600	ENSONIG00000018977	thumpd3	99	82.600	Oreochromis_niloticus
ENSPREG00000009176	thumpd3	79	55.556	ENSOANG00000014481	THUMPD3	97	56.763	Ornithorhynchus_anatinus
ENSPREG00000009176	thumpd3	91	58.351	ENSOCUG00000010921	THUMPD3	90	59.540	Oryctolagus_cuniculus
ENSPREG00000009176	thumpd3	99	78.270	ENSORLG00000000676	thumpd3	99	78.068	Oryzias_latipes
ENSPREG00000009176	thumpd3	99	78.672	ENSORLG00020007509	thumpd3	99	78.471	Oryzias_latipes_hni
ENSPREG00000009176	thumpd3	99	78.873	ENSORLG00015003615	thumpd3	99	78.672	Oryzias_latipes_hsok
ENSPREG00000009176	thumpd3	99	77.309	ENSOMEG00000014115	thumpd3	99	78.112	Oryzias_melastigma
ENSPREG00000009176	thumpd3	78	56.311	ENSOGAG00000017111	THUMPD3	99	57.108	Otolemur_garnettii
ENSPREG00000009176	thumpd3	94	59.063	ENSOARG00000007139	THUMPD3	95	59.063	Ovis_aries
ENSPREG00000009176	thumpd3	97	56.375	ENSPPAG00000025852	THUMPD3	97	56.375	Pan_paniscus
ENSPREG00000009176	thumpd3	90	60.385	ENSPPRG00000008071	THUMPD3	94	59.623	Panthera_pardus
ENSPREG00000009176	thumpd3	90	60.171	ENSPTIG00000017923	THUMPD3	94	59.414	Panthera_tigris_altaica
ENSPREG00000009176	thumpd3	97	56.175	ENSPTRG00000014585	THUMPD3	97	56.175	Pan_troglodytes
ENSPREG00000009176	thumpd3	97	54.528	ENSPANG00000016253	THUMPD3	98	56.574	Papio_anubis
ENSPREG00000009176	thumpd3	92	68.288	ENSPKIG00000014009	thumpd3	96	68.288	Paramormyrops_kingsleyae
ENSPREG00000009176	thumpd3	87	61.135	ENSPSIG00000007370	THUMPD3	90	59.611	Pelodiscus_sinensis
ENSPREG00000009176	thumpd3	94	77.426	ENSPMGG00000017563	thumpd3	99	77.101	Periophthalmus_magnuspinnatus
ENSPREG00000009176	thumpd3	88	60.440	ENSPEMG00000022411	Thumpd3	90	61.099	Peromyscus_maniculatus_bairdii
ENSPREG00000009176	thumpd3	87	53.708	ENSPMAG00000001291	thumpd3	98	54.018	Petromyzon_marinus
ENSPREG00000009176	thumpd3	90	57.906	ENSPCIG00000002049	THUMPD3	92	58.120	Phascolarctos_cinereus
ENSPREG00000009176	thumpd3	100	96.208	ENSPFOG00000002318	thumpd3	100	96.208	Poecilia_formosa
ENSPREG00000009176	thumpd3	100	96.208	ENSPLAG00000014804	thumpd3	100	96.208	Poecilia_latipinna
ENSPREG00000009176	thumpd3	100	96.208	ENSPMEG00000000582	thumpd3	100	96.208	Poecilia_mexicana
ENSPREG00000009176	thumpd3	97	56.175	ENSPPYG00000029461	THUMPD3	98	56.175	Pongo_abelii
ENSPREG00000009176	thumpd3	88	43.805	ENSPPYG00000017616	-	90	43.527	Pongo_abelii
ENSPREG00000009176	thumpd3	80	59.233	ENSPCAG00000015398	THUMPD3	99	59.233	Procavia_capensis
ENSPREG00000009176	thumpd3	97	48.723	ENSPCOG00000018095	-	99	49.902	Propithecus_coquereli
ENSPREG00000009176	thumpd3	84	51.467	ENSPCOG00000023618	-	99	51.467	Propithecus_coquereli
ENSPREG00000009176	thumpd3	89	58.495	ENSPVAG00000008721	THUMPD3	90	60.307	Pteropus_vampyrus
ENSPREG00000009176	thumpd3	99	81.800	ENSPNYG00000006918	thumpd3	99	81.800	Pundamilia_nyererei
ENSPREG00000009176	thumpd3	93	69.593	ENSPNAG00000014936	thumpd3	96	69.593	Pygocentrus_nattereri
ENSPREG00000009176	thumpd3	88	59.607	ENSRNOG00000006941	Thumpd3	90	59.607	Rattus_norvegicus
ENSPREG00000009176	thumpd3	95	55.311	ENSRBIG00000035954	THUMPD3	98	57.404	Rhinopithecus_bieti
ENSPREG00000009176	thumpd3	95	55.110	ENSRROG00000035734	THUMPD3	98	57.201	Rhinopithecus_roxellana
ENSPREG00000009176	thumpd3	97	55.050	ENSSBOG00000023567	THUMPD3	99	57.203	Saimiri_boliviensis_boliviensis
ENSPREG00000009176	thumpd3	90	57.569	ENSSHAG00000014467	THUMPD3	99	56.000	Sarcophilus_harrisii
ENSPREG00000009176	thumpd3	90	70.306	ENSSFOG00015019210	thumpd3	92	70.306	Scleropages_formosus
ENSPREG00000009176	thumpd3	99	80.240	ENSSMAG00000000609	thumpd3	97	82.479	Scophthalmus_maximus
ENSPREG00000009176	thumpd3	99	82.000	ENSSDUG00000012179	thumpd3	99	84.100	Seriola_dumerili
ENSPREG00000009176	thumpd3	99	82.400	ENSSLDG00000022028	thumpd3	99	82.400	Seriola_lalandi_dorsalis
ENSPREG00000009176	thumpd3	76	66.234	ENSSARG00000002239	THUMPD3	79	66.234	Sorex_araneus
ENSPREG00000009176	thumpd3	94	57.968	ENSSPUG00000017461	THUMPD3	98	57.968	Sphenodon_punctatus
ENSPREG00000009176	thumpd3	99	82.966	ENSSPAG00000008345	thumpd3	98	82.966	Stegastes_partitus
ENSPREG00000009176	thumpd3	92	60.460	ENSSSCG00000011542	THUMPD3	95	60.460	Sus_scrofa
ENSPREG00000009176	thumpd3	86	60.754	ENSTGUG00000010440	THUMPD3	100	61.419	Taeniopygia_guttata
ENSPREG00000009176	thumpd3	95	70.798	ENSTRUG00000004420	thumpd3	97	71.002	Takifugu_rubripes
ENSPREG00000009176	thumpd3	93	78.632	ENSTNIG00000014627	thumpd3	100	78.205	Tetraodon_nigroviridis
ENSPREG00000009176	thumpd3	97	53.861	ENSTBEG00000003450	THUMPD3	98	53.861	Tupaia_belangeri
ENSPREG00000009176	thumpd3	91	59.236	ENSTTRG00000009694	THUMPD3	91	60.085	Tursiops_truncatus
ENSPREG00000009176	thumpd3	97	57.115	ENSUAMG00000009412	THUMPD3	99	57.312	Ursus_americanus
ENSPREG00000009176	thumpd3	97	58.943	ENSUMAG00000019241	THUMPD3	99	59.146	Ursus_maritimus
ENSPREG00000009176	thumpd3	75	57.868	ENSVPAG00000002855	THUMPD3	94	57.868	Vicugna_pacos
ENSPREG00000009176	thumpd3	88	59.219	ENSVVUG00000025278	THUMPD3	90	60.217	Vulpes_vulpes
ENSPREG00000009176	thumpd3	90	59.574	ENSXETG00000001447	thumpd3	91	59.236	Xenopus_tropicalis
ENSPREG00000009176	thumpd3	98	96.728	ENSXCOG00000000159	thumpd3	99	97.053	Xiphophorus_couchianus
ENSPREG00000009176	thumpd3	100	96.208	ENSXMAG00000001423	thumpd3	100	96.208	Xiphophorus_maculatus