EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000009215 (Gene tree)
Gene ID: 103460852
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6039 bases
Position: chrKK215355.1:52123-58161
Accession: 103460852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013551	Ribonuc_P_40	PF08584.11	9.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013692	-	2283	XM_008403176	ENSPREP00000013551	348 (aa)	XP_008401398	UPI0004A36DF2

Gene Model

Click here to download ENSPREG00000009215's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009215	rpp40	99	36.695	ENSG00000124787	RPP40	98	36.913	Homo_sapiens
ENSPREG00000009215	rpp40	89	55.987	ENSAPOG00000008660	rpp40	92	55.987	Acanthochromis_polyacanthus
ENSPREG00000009215	rpp40	99	37.255	ENSAMEG00000012938	RPP40	98	37.255	Ailuropoda_melanoleuca
ENSPREG00000009215	rpp40	99	63.112	ENSACIG00000003617	rpp40	99	63.112	Amphilophus_citrinellus
ENSPREG00000009215	rpp40	100	68.481	ENSAOCG00000011846	rpp40	100	68.481	Amphiprion_ocellaris
ENSPREG00000009215	rpp40	100	68.481	ENSAPEG00000001322	rpp40	100	68.481	Amphiprion_percula
ENSPREG00000009215	rpp40	100	67.236	ENSATEG00000006584	rpp40	100	67.521	Anabas_testudineus
ENSPREG00000009215	rpp40	83	38.206	ENSAPLG00000005691	RPP40	99	38.206	Anas_platyrhynchos
ENSPREG00000009215	rpp40	99	38.764	ENSACAG00000006550	RPP40	87	38.764	Anolis_carolinensis
ENSPREG00000009215	rpp40	99	35.574	ENSANAG00000029246	RPP40	98	35.574	Aotus_nancymaae
ENSPREG00000009215	rpp40	99	63.663	ENSACLG00000015883	rpp40	97	63.663	Astatotilapia_calliptera
ENSPREG00000009215	rpp40	100	43.855	ENSAMXG00000001755	rpp40	100	43.855	Astyanax_mexicanus
ENSPREG00000009215	rpp40	99	39.216	ENSBTAG00000003332	RPP40	98	39.216	Bos_taurus
ENSPREG00000009215	rpp40	99	36.975	ENSCJAG00000021373	RPP40	98	36.975	Callithrix_jacchus
ENSPREG00000009215	rpp40	99	37.535	ENSCAFG00000009435	RPP40	98	37.535	Canis_familiaris
ENSPREG00000009215	rpp40	99	37.535	ENSCAFG00020013380	RPP40	98	37.535	Canis_lupus_dingo
ENSPREG00000009215	rpp40	99	38.764	ENSCHIG00000016849	RPP40	99	38.667	Capra_hircus
ENSPREG00000009215	rpp40	99	37.255	ENSTSYG00000032857	RPP40	98	37.255	Carlito_syrichta
ENSPREG00000009215	rpp40	89	33.437	ENSCAPG00000004957	RPP40	97	33.437	Cavia_aperea
ENSPREG00000009215	rpp40	99	37.815	ENSCPOG00000005855	RPP40	98	37.815	Cavia_porcellus
ENSPREG00000009215	rpp40	99	36.695	ENSCCAG00000019809	RPP40	98	36.695	Cebus_capucinus
ENSPREG00000009215	rpp40	99	36.695	ENSCATG00000038787	RPP40	98	36.695	Cercocebus_atys
ENSPREG00000009215	rpp40	99	37.535	ENSCLAG00000003235	RPP40	98	37.535	Chinchilla_lanigera
ENSPREG00000009215	rpp40	99	36.975	ENSCSAG00000007307	RPP40	98	36.975	Chlorocebus_sabaeus
ENSPREG00000009215	rpp40	54	38.571	ENSCHOG00000005856	-	76	38.571	Choloepus_hoffmanni
ENSPREG00000009215	rpp40	99	38.655	ENSCPBG00000009003	RPP40	98	38.655	Chrysemys_picta_bellii
ENSPREG00000009215	rpp40	99	36.695	ENSCANG00000033965	RPP40	98	36.695	Colobus_angolensis_palliatus
ENSPREG00000009215	rpp40	97	35.511	ENSCGRG00001018328	Rpp40	97	35.511	Cricetulus_griseus_chok1gshd
ENSPREG00000009215	rpp40	97	35.511	ENSCGRG00000011344	Rpp40	97	35.511	Cricetulus_griseus_crigri
ENSPREG00000009215	rpp40	100	52.000	ENSCSEG00000015006	-	100	52.000	Cynoglossus_semilaevis
ENSPREG00000009215	rpp40	74	60.536	ENSCVAG00000012169	rpp40	100	60.536	Cyprinodon_variegatus
ENSPREG00000009215	rpp40	100	45.429	ENSDARG00000017605	rpp40	100	45.429	Danio_rerio
ENSPREG00000009215	rpp40	78	37.762	ENSDNOG00000048136	RPP40	96	37.762	Dasypus_novemcinctus
ENSPREG00000009215	rpp40	99	31.880	ENSDORG00000011196	-	98	31.880	Dipodomys_ordii
ENSPREG00000009215	rpp40	99	37.815	ENSDORG00000029944	-	98	37.815	Dipodomys_ordii
ENSPREG00000009215	rpp40	82	38.272	ENSETEG00000007458	RPP40	82	38.272	Echinops_telfairi
ENSPREG00000009215	rpp40	96	35.447	ENSEBUG00000000386	rpp40	99	34.891	Eptatretus_burgeri
ENSPREG00000009215	rpp40	99	37.255	ENSEASG00005012116	RPP40	79	37.255	Equus_asinus_asinus
ENSPREG00000009215	rpp40	99	37.255	ENSECAG00000017247	RPP40	79	37.255	Equus_caballus
ENSPREG00000009215	rpp40	78	32.281	ENSEEUG00000012087	RPP40	96	32.281	Erinaceus_europaeus
ENSPREG00000009215	rpp40	100	45.429	ENSELUG00000017004	rpp40	100	45.429	Esox_lucius
ENSPREG00000009215	rpp40	99	37.535	ENSFCAG00000009249	RPP40	98	37.535	Felis_catus
ENSPREG00000009215	rpp40	86	37.538	ENSFALG00000013166	RPP40	99	37.538	Ficedula_albicollis
ENSPREG00000009215	rpp40	79	30.556	ENSFDAG00000000265	-	98	30.556	Fukomys_damarensis
ENSPREG00000009215	rpp40	99	37.255	ENSFDAG00000013001	-	98	37.255	Fukomys_damarensis
ENSPREG00000009215	rpp40	100	77.364	ENSFHEG00000021429	rpp40	89	77.364	Fundulus_heteroclitus
ENSPREG00000009215	rpp40	89	41.195	ENSGMOG00000018653	rpp40	100	41.195	Gadus_morhua
ENSPREG00000009215	rpp40	99	36.901	ENSGALG00000036074	RPP40	98	36.901	Gallus_gallus
ENSPREG00000009215	rpp40	83	80.137	ENSGAFG00000004189	-	100	80.137	Gambusia_affinis
ENSPREG00000009215	rpp40	100	64.589	ENSGACG00000002472	rpp40	100	64.589	Gasterosteus_aculeatus
ENSPREG00000009215	rpp40	99	39.496	ENSGAGG00000012918	RPP40	98	39.496	Gopherus_agassizii
ENSPREG00000009215	rpp40	99	36.695	ENSGGOG00000013764	RPP40	98	36.695	Gorilla_gorilla
ENSPREG00000009215	rpp40	92	60.185	ENSHBUG00000009378	rpp40	96	60.185	Haplochromis_burtoni
ENSPREG00000009215	rpp40	99	37.535	ENSHGLG00000004871	RPP40	98	37.535	Heterocephalus_glaber_female
ENSPREG00000009215	rpp40	99	37.535	ENSHGLG00100002080	RPP40	98	37.535	Heterocephalus_glaber_male
ENSPREG00000009215	rpp40	98	48.555	ENSHCOG00000013264	-	94	48.555	Hippocampus_comes
ENSPREG00000009215	rpp40	100	42.897	ENSIPUG00000008951	RPP40	100	42.897	Ictalurus_punctatus
ENSPREG00000009215	rpp40	99	36.975	ENSSTOG00000011199	RPP40	98	36.975	Ictidomys_tridecemlineatus
ENSPREG00000009215	rpp40	99	37.921	ENSJJAG00000020629	Rpp40	98	37.921	Jaculus_jaculus
ENSPREG00000009215	rpp40	100	71.633	ENSKMAG00000019358	rpp40	100	71.633	Kryptolebias_marmoratus
ENSPREG00000009215	rpp40	100	65.537	ENSLBEG00000022724	rpp40	100	65.537	Labrus_bergylta
ENSPREG00000009215	rpp40	100	39.612	ENSLACG00000014848	RPP40	100	39.612	Latimeria_chalumnae
ENSPREG00000009215	rpp40	100	42.659	ENSLOCG00000011650	rpp40	99	42.659	Lepisosteus_oculatus
ENSPREG00000009215	rpp40	82	38.255	ENSLAFG00000007530	RPP40	98	38.255	Loxodonta_africana
ENSPREG00000009215	rpp40	99	36.695	ENSMFAG00000043100	RPP40	98	36.695	Macaca_fascicularis
ENSPREG00000009215	rpp40	99	36.695	ENSMMUG00000004966	RPP40	98	36.695	Macaca_mulatta
ENSPREG00000009215	rpp40	99	36.695	ENSMNEG00000041986	RPP40	98	36.913	Macaca_nemestrina
ENSPREG00000009215	rpp40	99	31.742	ENSMLEG00000040851	RPP40	99	41.748	Mandrillus_leucophaeus
ENSPREG00000009215	rpp40	100	68.481	ENSMAMG00000019551	rpp40	99	68.481	Mastacembelus_armatus
ENSPREG00000009215	rpp40	99	63.689	ENSMZEG00005019475	rpp40	99	63.689	Maylandia_zebra
ENSPREG00000009215	rpp40	89	39.130	ENSMGAG00000004009	RPP40	89	39.130	Meleagris_gallopavo
ENSPREG00000009215	rpp40	99	36.134	ENSMAUG00000010268	Rpp40	98	36.134	Mesocricetus_auratus
ENSPREG00000009215	rpp40	99	38.375	ENSMICG00000003297	RPP40	98	34.746	Microcebus_murinus
ENSPREG00000009215	rpp40	99	38.095	ENSMOCG00000000305	Rpp40	98	38.095	Microtus_ochrogaster
ENSPREG00000009215	rpp40	100	54.728	ENSMMOG00000020591	-	100	54.728	Mola_mola
ENSPREG00000009215	rpp40	97	37.677	ENSMODG00000009826	RPP40	97	37.677	Monodelphis_domestica
ENSPREG00000009215	rpp40	100	67.049	ENSMALG00000020133	rpp40	100	67.049	Monopterus_albus
ENSPREG00000009215	rpp40	99	37.255	MGP_CAROLIEiJ_G0018429	Rpp40	98	37.255	Mus_caroli
ENSPREG00000009215	rpp40	99	37.815	ENSMUSG00000021418	Rpp40	98	37.815	Mus_musculus
ENSPREG00000009215	rpp40	99	36.975	MGP_PahariEiJ_G0019497	Rpp40	98	36.975	Mus_pahari
ENSPREG00000009215	rpp40	99	37.535	MGP_SPRETEiJ_G0019309	Rpp40	98	37.535	Mus_spretus
ENSPREG00000009215	rpp40	99	37.815	ENSMPUG00000000530	RPP40	92	37.815	Mustela_putorius_furo
ENSPREG00000009215	rpp40	99	39.496	ENSMLUG00000000501	RPP40	98	39.496	Myotis_lucifugus
ENSPREG00000009215	rpp40	99	37.815	ENSNGAG00000023955	-	98	37.815	Nannospalax_galili
ENSPREG00000009215	rpp40	93	34.821	ENSNGAG00000022529	-	97	34.821	Nannospalax_galili
ENSPREG00000009215	rpp40	88	56.270	ENSNBRG00000017465	rpp40	86	56.508	Neolamprologus_brichardi
ENSPREG00000009215	rpp40	99	36.975	ENSNLEG00000034397	RPP40	98	36.975	Nomascus_leucogenys
ENSPREG00000009215	rpp40	99	33.053	ENSMEUG00000005300	RPP40	98	33.053	Notamacropus_eugenii
ENSPREG00000009215	rpp40	89	33.540	ENSODEG00000006170	-	100	33.540	Octodon_degus
ENSPREG00000009215	rpp40	100	38.227	ENSODEG00000007255	-	99	38.227	Octodon_degus
ENSPREG00000009215	rpp40	99	36.695	ENSODEG00000018153	-	98	36.695	Octodon_degus
ENSPREG00000009215	rpp40	99	63.977	ENSONIG00000014016	rpp40	99	63.977	Oreochromis_niloticus
ENSPREG00000009215	rpp40	82	39.799	ENSOANG00000001200	RPP40	98	39.799	Ornithorhynchus_anatinus
ENSPREG00000009215	rpp40	98	38.873	ENSOCUG00000000354	RPP40	98	38.873	Oryctolagus_cuniculus
ENSPREG00000009215	rpp40	99	63.584	ENSORLG00000008242	-	99	63.584	Oryzias_latipes
ENSPREG00000009215	rpp40	99	63.584	ENSORLG00020013745	-	90	63.584	Oryzias_latipes_hni
ENSPREG00000009215	rpp40	99	63.873	ENSORLG00015000887	-	99	63.873	Oryzias_latipes_hsok
ENSPREG00000009215	rpp40	99	63.295	ENSOMEG00000002747	rpp40	99	63.295	Oryzias_melastigma
ENSPREG00000009215	rpp40	99	38.375	ENSOGAG00000006055	RPP40	98	38.375	Otolemur_garnettii
ENSPREG00000009215	rpp40	89	38.889	ENSOARG00000018783	RPP40	99	39.333	Ovis_aries
ENSPREG00000009215	rpp40	99	36.695	ENSPPAG00000023703	RPP40	98	36.695	Pan_paniscus
ENSPREG00000009215	rpp40	99	37.255	ENSPPRG00000005612	RPP40	98	37.255	Panthera_pardus
ENSPREG00000009215	rpp40	99	35.311	ENSPTIG00000018847	RPP40	98	35.311	Panthera_tigris_altaica
ENSPREG00000009215	rpp40	99	36.415	ENSPTRG00000017690	RPP40	98	36.415	Pan_troglodytes
ENSPREG00000009215	rpp40	99	36.695	ENSPANG00000017865	RPP40	98	36.695	Papio_anubis
ENSPREG00000009215	rpp40	100	42.500	ENSPKIG00000006311	rpp40	100	42.500	Paramormyrops_kingsleyae
ENSPREG00000009215	rpp40	60	34.842	ENSPSIG00000007854	RPP40	99	34.842	Pelodiscus_sinensis
ENSPREG00000009215	rpp40	88	30.530	ENSPEMG00000020809	Rpp40	93	30.530	Peromyscus_maniculatus_bairdii
ENSPREG00000009215	rpp40	75	35.870	ENSPMAG00000008412	rpp40	99	35.870	Petromyzon_marinus
ENSPREG00000009215	rpp40	99	38.095	ENSPCIG00000010682	RPP40	98	38.095	Phascolarctos_cinereus
ENSPREG00000009215	rpp40	100	95.429	ENSPFOG00000011460	rpp40	99	95.429	Poecilia_formosa
ENSPREG00000009215	rpp40	100	95.690	ENSPLAG00000001334	rpp40	100	95.690	Poecilia_latipinna
ENSPREG00000009215	rpp40	100	95.690	ENSPMEG00000007721	rpp40	100	95.690	Poecilia_mexicana
ENSPREG00000009215	rpp40	99	36.415	ENSPPYG00000016194	RPP40	98	36.415	Pongo_abelii
ENSPREG00000009215	rpp40	51	41.667	ENSPCAG00000002700	-	97	41.667	Procavia_capensis
ENSPREG00000009215	rpp40	99	37.535	ENSPCOG00000003907	RPP40	98	37.535	Propithecus_coquereli
ENSPREG00000009215	rpp40	99	36.975	ENSPVAG00000011325	RPP40	98	36.975	Pteropus_vampyrus
ENSPREG00000009215	rpp40	83	58.419	ENSPNYG00000004432	rpp40	100	58.419	Pundamilia_nyererei
ENSPREG00000009215	rpp40	100	43.767	ENSPNAG00000019125	rpp40	100	43.767	Pygocentrus_nattereri
ENSPREG00000009215	rpp40	99	36.415	ENSRNOG00000016226	Rpp40	98	36.415	Rattus_norvegicus
ENSPREG00000009215	rpp40	99	36.415	ENSRBIG00000035800	RPP40	98	36.577	Rhinopithecus_bieti
ENSPREG00000009215	rpp40	99	36.415	ENSRROG00000039116	RPP40	98	36.415	Rhinopithecus_roxellana
ENSPREG00000009215	rpp40	99	36.975	ENSSBOG00000020297	RPP40	98	36.975	Saimiri_boliviensis_boliviensis
ENSPREG00000009215	rpp40	75	38.321	ENSSHAG00000002102	RPP40	99	38.321	Sarcophilus_harrisii
ENSPREG00000009215	rpp40	100	44.722	ENSSFOG00015001142	rpp40	81	44.722	Scleropages_formosus
ENSPREG00000009215	rpp40	100	66.102	ENSSDUG00000007202	rpp40	100	66.102	Seriola_dumerili
ENSPREG00000009215	rpp40	100	66.102	ENSSLDG00000017563	rpp40	100	66.102	Seriola_lalandi_dorsalis
ENSPREG00000009215	rpp40	99	38.655	ENSSPUG00000017487	-	98	38.655	Sphenodon_punctatus
ENSPREG00000009215	rpp40	81	36.271	ENSSPUG00000018950	-	100	36.271	Sphenodon_punctatus
ENSPREG00000009215	rpp40	100	67.335	ENSSPAG00000022716	rpp40	100	67.335	Stegastes_partitus
ENSPREG00000009215	rpp40	99	38.375	ENSSSCG00000000998	RPP40	99	38.079	Sus_scrofa
ENSPREG00000009215	rpp40	99	38.936	ENSTGUG00000002258	-	99	38.936	Taeniopygia_guttata
ENSPREG00000009215	rpp40	99	63.429	ENSTRUG00000003755	rpp40	99	63.429	Takifugu_rubripes
ENSPREG00000009215	rpp40	100	61.864	ENSTNIG00000003077	rpp40	100	61.864	Tetraodon_nigroviridis
ENSPREG00000009215	rpp40	100	33.518	ENSTTRG00000007319	RPP40	99	33.518	Tursiops_truncatus
ENSPREG00000009215	rpp40	99	36.975	ENSUAMG00000002159	RPP40	98	36.975	Ursus_americanus
ENSPREG00000009215	rpp40	99	36.975	ENSUMAG00000018639	RPP40	92	36.975	Ursus_maritimus
ENSPREG00000009215	rpp40	99	37.535	ENSVVUG00000005451	RPP40	98	37.535	Vulpes_vulpes
ENSPREG00000009215	rpp40	100	35.440	ENSXETG00000017617	rpp40	100	35.000	Xenopus_tropicalis
ENSPREG00000009215	rpp40	56	84.000	ENSXCOG00000019991	-	60	84.000	Xiphophorus_couchianus
ENSPREG00000009215	rpp40	100	70.255	ENSXMAG00000024940	rpp40	99	70.621	Xiphophorus_maculatus