EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009228 (Gene tree)
Gene ID: 103458235
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 14255 bases
Position: chrLG22:6049979-6064233
Accession: 103458235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013652	RRM_1	PF00076.22	1.6e-08	1	1
ENSPREP00000013618	RRM_1	PF00076.22	1.8e-08	1	1
ENSPREP00000013652	PWI	PF01480.17	7.7e-14	1	1
ENSPREP00000013618	PWI	PF01480.17	9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013759	-	2591	XM_008398894	ENSPREP00000013618	859 (aa)	XP_008397116	UPI0004A4C379
ENSPRET00000013793	-	2343	-	ENSPREP00000013652	780 (aa)	-	-

Gene Model

Click here to download ENSPREG00000009228's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009228	rbm25a	57	73.814	ENSPREG00000008522	rbm25b	55	76.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009228	rbm25a	53	77.885	ENSG00000119707	RBM25	100	74.219	Homo_sapiens
ENSPREG00000009228	rbm25a	91	88.645	ENSAPOG00000017757	rbm25a	100	84.485	Acanthochromis_polyacanthus
ENSPREG00000009228	rbm25a	56	72.747	ENSAPOG00000015321	rbm25b	56	75.439	Acanthochromis_polyacanthus
ENSPREG00000009228	rbm25a	53	78.365	ENSAMEG00000016270	RBM25	86	79.859	Ailuropoda_melanoleuca
ENSPREG00000009228	rbm25a	57	85.138	ENSACIG00000019482	rbm25a	57	85.138	Amphilophus_citrinellus
ENSPREG00000009228	rbm25a	88	67.442	ENSACIG00000014178	rbm25b	100	67.428	Amphilophus_citrinellus
ENSPREG00000009228	rbm25a	57	89.616	ENSAOCG00000013695	rbm25a	100	85.232	Amphiprion_ocellaris
ENSPREG00000009228	rbm25a	57	70.551	ENSAOCG00000019308	rbm25b	55	78.472	Amphiprion_ocellaris
ENSPREG00000009228	rbm25a	59	75.325	ENSAPEG00000009666	rbm25b	58	76.264	Amphiprion_percula
ENSPREG00000009228	rbm25a	57	89.616	ENSAPEG00000007514	rbm25a	100	84.160	Amphiprion_percula
ENSPREG00000009228	rbm25a	91	86.081	ENSATEG00000020676	rbm25a	100	84.262	Anabas_testudineus
ENSPREG00000009228	rbm25a	57	78.971	ENSATEG00000017312	rbm25b	56	79.859	Anabas_testudineus
ENSPREG00000009228	rbm25a	53	79.518	ENSAPLG00000006643	RBM25	85	80.562	Anas_platyrhynchos
ENSPREG00000009228	rbm25a	53	77.885	ENSANAG00000028295	RBM25	98	70.242	Aotus_nancymaae
ENSPREG00000009228	rbm25a	91	75.660	ENSACLG00000027482	rbm25a	100	78.483	Astatotilapia_calliptera
ENSPREG00000009228	rbm25a	57	74.419	ENSACLG00000024359	rbm25b	55	76.535	Astatotilapia_calliptera
ENSPREG00000009228	rbm25a	60	78.629	ENSAMXG00000024525	rbm25b	100	72.485	Astyanax_mexicanus
ENSPREG00000009228	rbm25a	53	78.365	ENSBTAG00000017177	RBM25	86	79.859	Bos_taurus
ENSPREG00000009228	rbm25a	67	58.333	WBGene00012245	W04D2.6	81	32.805	Caenorhabditis_elegans
ENSPREG00000009228	rbm25a	60	76.860	ENSCJAG00000014441	-	98	70.588	Callithrix_jacchus
ENSPREG00000009228	rbm25a	53	78.606	ENSTSYG00000003024	RBM25	98	70.588	Carlito_syrichta
ENSPREG00000009228	rbm25a	53	78.365	ENSCPOG00000002479	RBM25	86	79.859	Cavia_porcellus
ENSPREG00000009228	rbm25a	53	78.365	ENSCATG00000039651	RBM25	98	70.588	Cercocebus_atys
ENSPREG00000009228	rbm25a	53	78.365	ENSCLAG00000003977	RBM25	86	79.859	Chinchilla_lanigera
ENSPREG00000009228	rbm25a	53	78.365	ENSCSAG00000012801	RBM25	86	79.859	Chlorocebus_sabaeus
ENSPREG00000009228	rbm25a	67	86.486	ENSCHOG00000008903	RBM25	65	86.301	Choloepus_hoffmanni
ENSPREG00000009228	rbm25a	53	71.154	ENSCANG00000043874	RBM25	83	86.957	Colobus_angolensis_palliatus
ENSPREG00000009228	rbm25a	99	66.736	ENSCGRG00001020817	Rbm25	89	79.391	Cricetulus_griseus_chok1gshd
ENSPREG00000009228	rbm25a	53	77.885	ENSCGRG00000017595	Rbm25	86	79.391	Cricetulus_griseus_crigri
ENSPREG00000009228	rbm25a	55	80.131	ENSCSEG00000009430	rbm25a	56	80.659	Cynoglossus_semilaevis
ENSPREG00000009228	rbm25a	57	75.223	ENSCSEG00000020737	rbm25b	56	74.009	Cynoglossus_semilaevis
ENSPREG00000009228	rbm25a	71	87.928	ENSCVAG00000005498	rbm25a	99	94.186	Cyprinodon_variegatus
ENSPREG00000009228	rbm25a	59	77.649	ENSDARG00000006395	rbm25b	100	72.847	Danio_rerio
ENSPREG00000009228	rbm25a	52	70.073	ENSDARG00000039266	rbm25a	99	96.203	Danio_rerio
ENSPREG00000009228	rbm25a	53	78.125	ENSDNOG00000004959	RBM25	86	79.625	Dasypus_novemcinctus
ENSPREG00000009228	rbm25a	53	78.125	ENSDORG00000013247	Rbm25	85	80.094	Dipodomys_ordii
ENSPREG00000009228	rbm25a	85	70.085	FBgn0028474	CG4119	70	67.200	Drosophila_melanogaster
ENSPREG00000009228	rbm25a	53	79.518	ENSETEG00000015941	RBM25	86	79.812	Echinops_telfairi
ENSPREG00000009228	rbm25a	70	41.096	ENSEBUG00000002963	rbm25b	56	65.909	Eptatretus_burgeri
ENSPREG00000009228	rbm25a	75	90.551	ENSEEUG00000007350	RBM25	82	81.818	Erinaceus_europaeus
ENSPREG00000009228	rbm25a	58	70.909	ENSELUG00000007730	rbm25b	56	74.200	Esox_lucius
ENSPREG00000009228	rbm25a	56	74.312	ENSELUG00000021847	rbm25a	51	73.770	Esox_lucius
ENSPREG00000009228	rbm25a	53	78.365	ENSFCAG00000011716	RBM25	98	70.588	Felis_catus
ENSPREG00000009228	rbm25a	53	78.365	ENSFDAG00000006542	RBM25	86	79.859	Fukomys_damarensis
ENSPREG00000009228	rbm25a	100	90.668	ENSFHEG00000005318	rbm25a	100	90.783	Fundulus_heteroclitus
ENSPREG00000009228	rbm25a	60	70.600	ENSFHEG00000003513	rbm25b	56	75.492	Fundulus_heteroclitus
ENSPREG00000009228	rbm25a	95	60.392	ENSGMOG00000014097	rbm25b	57	67.206	Gadus_morhua
ENSPREG00000009228	rbm25a	82	78.860	ENSGMOG00000014070	rbm25a	82	89.130	Gadus_morhua
ENSPREG00000009228	rbm25a	100	69.174	ENSGAFG00000001092	rbm25b	50	76.674	Gambusia_affinis
ENSPREG00000009228	rbm25a	100	96.275	ENSGAFG00000018036	rbm25a	100	95.094	Gambusia_affinis
ENSPREG00000009228	rbm25a	53	77.885	ENSGGOG00000002415	RBM25	98	70.588	Gorilla_gorilla
ENSPREG00000009228	rbm25a	90	87.179	ENSHBUG00000016908	rbm25a	100	84.512	Haplochromis_burtoni
ENSPREG00000009228	rbm25a	57	75.053	ENSHBUG00000018499	rbm25b	100	66.185	Haplochromis_burtoni
ENSPREG00000009228	rbm25a	53	78.365	ENSHGLG00000014745	RBM25	100	67.491	Heterocephalus_glaber_female
ENSPREG00000009228	rbm25a	53	78.554	ENSHGLG00100018236	-	99	74.112	Heterocephalus_glaber_male
ENSPREG00000009228	rbm25a	97	72.272	ENSHCOG00000000142	rbm25b	100	70.968	Hippocampus_comes
ENSPREG00000009228	rbm25a	57	73.614	ENSIPUG00000021051	rbm25b	100	73.217	Ictalurus_punctatus
ENSPREG00000009228	rbm25a	53	78.365	ENSSTOG00000011117	RBM25	86	79.859	Ictidomys_tridecemlineatus
ENSPREG00000009228	rbm25a	94	84.856	ENSKMAG00000016242	rbm25a	100	84.505	Kryptolebias_marmoratus
ENSPREG00000009228	rbm25a	58	84.211	ENSKMAG00000018826	rbm25b	55	76.096	Kryptolebias_marmoratus
ENSPREG00000009228	rbm25a	87	81.855	ENSLBEG00000010667	rbm25b	54	78.689	Labrus_bergylta
ENSPREG00000009228	rbm25a	60	81.148	ENSLACG00000011845	RBM25	51	79.673	Latimeria_chalumnae
ENSPREG00000009228	rbm25a	60	77.143	ENSLOCG00000014196	rbm25b	100	73.129	Lepisosteus_oculatus
ENSPREG00000009228	rbm25a	53	78.365	ENSMFAG00000040040	RBM25	98	70.588	Macaca_fascicularis
ENSPREG00000009228	rbm25a	53	78.365	ENSMMUG00000002332	RBM25	96	83.810	Macaca_mulatta
ENSPREG00000009228	rbm25a	53	77.885	ENSMNEG00000032922	RBM25	85	79.859	Macaca_nemestrina
ENSPREG00000009228	rbm25a	53	78.365	ENSMLEG00000035157	RBM25	98	70.588	Mandrillus_leucophaeus
ENSPREG00000009228	rbm25a	57	82.844	ENSMAMG00000000165	rbm25a	51	89.196	Mastacembelus_armatus
ENSPREG00000009228	rbm25a	58	83.871	ENSMAMG00000004524	rbm25b	55	77.483	Mastacembelus_armatus
ENSPREG00000009228	rbm25a	90	87.179	ENSMZEG00005011183	rbm25a	100	84.512	Maylandia_zebra
ENSPREG00000009228	rbm25a	57	74.419	ENSMZEG00005001453	rbm25b	55	76.535	Maylandia_zebra
ENSPREG00000009228	rbm25a	53	78.606	ENSMICG00000034082	RBM25	98	70.242	Microcebus_murinus
ENSPREG00000009228	rbm25a	53	77.885	ENSMOCG00000001935	Rbm25	85	79.391	Microtus_ochrogaster
ENSPREG00000009228	rbm25a	56	89.165	ENSMMOG00000009065	rbm25a	100	84.761	Mola_mola
ENSPREG00000009228	rbm25a	97	70.297	ENSMMOG00000015545	rbm25b	61	76.316	Mola_mola
ENSPREG00000009228	rbm25a	53	78.365	ENSMODG00000006820	RBM25	85	79.859	Monodelphis_domestica
ENSPREG00000009228	rbm25a	58	73.006	ENSMALG00000020441	rbm25b	86	76.201	Monopterus_albus
ENSPREG00000009228	rbm25a	51	81.106	ENSMALG00000020459	rbm25a	90	85.422	Monopterus_albus
ENSPREG00000009228	rbm25a	53	77.885	MGP_CAROLIEiJ_G0017921	Rbm25	99	73.980	Mus_caroli
ENSPREG00000009228	rbm25a	53	77.885	ENSMUSG00000010608	Rbm25	99	73.980	Mus_musculus
ENSPREG00000009228	rbm25a	53	77.885	MGP_PahariEiJ_G0029677	Rbm25	99	73.980	Mus_pahari
ENSPREG00000009228	rbm25a	58	70.868	MGP_SPRETEiJ_G0018766	-	99	73.980	Mus_spretus
ENSPREG00000009228	rbm25a	53	77.885	ENSMPUG00000003698	RBM25	82	79.859	Mustela_putorius_furo
ENSPREG00000009228	rbm25a	53	73.188	ENSMLUG00000024167	-	87	73.239	Myotis_lucifugus
ENSPREG00000009228	rbm25a	55	74.194	ENSMLUG00000015434	-	87	75.878	Myotis_lucifugus
ENSPREG00000009228	rbm25a	53	78.365	ENSNGAG00000018465	Rbm25	86	79.859	Nannospalax_galili
ENSPREG00000009228	rbm25a	90	87.179	ENSNBRG00000003761	rbm25a	100	84.512	Neolamprologus_brichardi
ENSPREG00000009228	rbm25a	53	78.125	ENSNLEG00000002701	RBM25	98	70.588	Nomascus_leucogenys
ENSPREG00000009228	rbm25a	88	80.408	ENSOCUG00000013737	RBM25	86	79.859	Oryctolagus_cuniculus
ENSPREG00000009228	rbm25a	57	72.000	ENSORLG00000011874	rbm25b	55	75.385	Oryzias_latipes
ENSPREG00000009228	rbm25a	56	77.982	ENSORLG00020016422	rbm25b	55	75.604	Oryzias_latipes_hni
ENSPREG00000009228	rbm25a	74	79.927	ENSORLG00015022499	rbm25a	52	70.430	Oryzias_latipes_hsok
ENSPREG00000009228	rbm25a	57	72.632	ENSORLG00015011269	rbm25b	55	76.044	Oryzias_latipes_hsok
ENSPREG00000009228	rbm25a	89	69.880	ENSOMEG00000023172	rbm25b	100	68.758	Oryzias_melastigma
ENSPREG00000009228	rbm25a	80	78.229	ENSOMEG00000022138	rbm25a	100	83.740	Oryzias_melastigma
ENSPREG00000009228	rbm25a	53	78.313	ENSOGAG00000014986	RBM25	87	79.859	Otolemur_garnettii
ENSPREG00000009228	rbm25a	53	78.365	ENSOARG00000000319	RBM25	86	79.859	Ovis_aries
ENSPREG00000009228	rbm25a	53	77.885	ENSPPAG00000039402	RBM25	98	70.588	Pan_paniscus
ENSPREG00000009228	rbm25a	53	78.365	ENSPPRG00000017374	RBM25	98	70.588	Panthera_pardus
ENSPREG00000009228	rbm25a	53	78.365	ENSPTIG00000017309	RBM25	98	70.588	Panthera_tigris_altaica
ENSPREG00000009228	rbm25a	53	77.885	ENSPTRG00000006509	RBM25	98	70.588	Pan_troglodytes
ENSPREG00000009228	rbm25a	53	78.365	ENSPANG00000018212	RBM25	98	70.588	Papio_anubis
ENSPREG00000009228	rbm25a	57	77.612	ENSPKIG00000003203	rbm25b	100	76.642	Paramormyrops_kingsleyae
ENSPREG00000009228	rbm25a	57	74.530	ENSPMGG00000015740	rbm25b	56	76.253	Periophthalmus_magnuspinnatus
ENSPREG00000009228	rbm25a	53	74.940	ENSPMGG00000001791	rbm25a	97	78.000	Periophthalmus_magnuspinnatus
ENSPREG00000009228	rbm25a	53	71.394	ENSPCIG00000011166	RBM25	77	73.536	Phascolarctos_cinereus
ENSPREG00000009228	rbm25a	100	98.610	ENSPFOG00000017931	rbm25a	100	98.610	Poecilia_formosa
ENSPREG00000009228	rbm25a	57	73.706	ENSPFOG00000018808	rbm25b	55	76.407	Poecilia_formosa
ENSPREG00000009228	rbm25a	100	98.146	ENSPLAG00000018338	rbm25a	100	98.146	Poecilia_latipinna
ENSPREG00000009228	rbm25a	51	70.872	ENSPMEG00000012262	rbm25b	100	82.824	Poecilia_mexicana
ENSPREG00000009228	rbm25a	100	98.494	ENSPMEG00000024470	rbm25a	100	98.494	Poecilia_mexicana
ENSPREG00000009228	rbm25a	57	73.499	ENSPMEG00000019161	rbm25b	55	76.407	Poecilia_mexicana
ENSPREG00000009228	rbm25a	88	74.894	ENSPCAG00000006226	RBM25	76	86.957	Procavia_capensis
ENSPREG00000009228	rbm25a	53	78.606	ENSPCOG00000023107	RBM25	98	70.588	Propithecus_coquereli
ENSPREG00000009228	rbm25a	53	78.365	ENSPVAG00000003931	RBM25	85	79.859	Pteropus_vampyrus
ENSPREG00000009228	rbm25a	56	85.435	ENSPNYG00000022596	rbm25a	53	89.437	Pundamilia_nyererei
ENSPREG00000009228	rbm25a	60	78.138	ENSPNAG00000012024	rbm25b	100	74.450	Pygocentrus_nattereri
ENSPREG00000009228	rbm25a	60	80.165	ENSRNOG00000002871	Rbm25l1	51	79.206	Rattus_norvegicus
ENSPREG00000009228	rbm25a	53	78.365	ENSRBIG00000039904	RBM25	98	70.588	Rhinopithecus_bieti
ENSPREG00000009228	rbm25a	53	78.365	ENSRROG00000035556	RBM25	94	83.810	Rhinopithecus_roxellana
ENSPREG00000009228	rbm25a	60	80.579	ENSSBOG00000034153	RBM25	96	79.283	Saimiri_boliviensis_boliviensis
ENSPREG00000009228	rbm25a	53	78.365	ENSSHAG00000012859	RBM25	86	79.859	Sarcophilus_harrisii
ENSPREG00000009228	rbm25a	61	83.871	ENSSFOG00015007093	rbm25	100	77.333	Scleropages_formosus
ENSPREG00000009228	rbm25a	59	81.055	ENSSMAG00000009745	rbm25a	100	82.360	Scophthalmus_maximus
ENSPREG00000009228	rbm25a	91	88.278	ENSSDUG00000017984	rbm25a	100	84.867	Seriola_dumerili
ENSPREG00000009228	rbm25a	91	87.912	ENSSLDG00000010342	rbm25a	100	84.746	Seriola_lalandi_dorsalis
ENSPREG00000009228	rbm25a	90	71.084	ENSSLDG00000024573	rbm25b	98	76.754	Seriola_lalandi_dorsalis
ENSPREG00000009228	rbm25a	53	78.365	ENSSARG00000002327	RBM25	86	79.859	Sorex_araneus
ENSPREG00000009228	rbm25a	60	73.820	ENSSPAG00000016168	rbm25b	56	75.764	Stegastes_partitus
ENSPREG00000009228	rbm25a	55	82.479	ENSSPAG00000011114	rbm25a	100	83.815	Stegastes_partitus
ENSPREG00000009228	rbm25a	53	78.606	ENSTGUG00000011246	-	86	79.625	Taeniopygia_guttata
ENSPREG00000009228	rbm25a	59	77.273	ENSTRUG00000003076	rbm25a	100	79.853	Takifugu_rubripes
ENSPREG00000009228	rbm25a	58	75.055	ENSTRUG00000017964	rbm25b	56	76.549	Takifugu_rubripes
ENSPREG00000009228	rbm25a	94	66.540	ENSTNIG00000012222	rbm25b	66	82.329	Tetraodon_nigroviridis
ENSPREG00000009228	rbm25a	51	71.889	ENSTNIG00000004673	rbm25a	99	82.834	Tetraodon_nigroviridis
ENSPREG00000009228	rbm25a	64	80.383	ENSTBEG00000010538	-	64	79.426	Tupaia_belangeri
ENSPREG00000009228	rbm25a	56	80.579	ENSUAMG00000007707	RBM25	100	76.074	Ursus_americanus
ENSPREG00000009228	rbm25a	88	71.915	ENSVPAG00000009052	RBM25	79	79.283	Vicugna_pacos
ENSPREG00000009228	rbm25a	53	78.365	ENSVVUG00000004426	RBM25	84	79.859	Vulpes_vulpes
ENSPREG00000009228	rbm25a	81	79.752	ENSXETG00000021857	rbm25	54	78.738	Xenopus_tropicalis
ENSPREG00000009228	rbm25a	100	69.814	ENSXCOG00000002222	rbm25b	53	75.701	Xiphophorus_couchianus
ENSPREG00000009228	rbm25a	100	95.477	ENSXCOG00000004043	RBM25	100	95.477	Xiphophorus_couchianus
ENSPREG00000009228	rbm25a	100	96.857	ENSXMAG00000009077	RBM25	100	96.857	Xiphophorus_maculatus
ENSPREG00000009228	rbm25a	100	70.334	ENSXMAG00000017290	rbm25b	55	76.129	Xiphophorus_maculatus