EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009237 (Gene tree)
Gene ID: 103460851
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7568 bases
Position: chrKK215355.1:57671-65238
Accession: 103460851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013583	RIO1	PF01163.22	2.4e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013724	-	2862	XM_008403175	ENSPREP00000013583	526 (aa)	XP_008401397	UPI0004A4DBB8

Gene Model

Click here to download ENSPREG00000009237's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009237	riok1	56	42.244	ENSPREG00000010010	riok3	59	42.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009237	riok1	87	69.811	ENSG00000124784	RIOK1	98	62.118	Homo_sapiens
ENSPREG00000009237	riok1	58	74.675	ENSAPOG00000015632	riok1	99	74.026	Acanthochromis_polyacanthus
ENSPREG00000009237	riok1	99	63.799	ENSAMEG00000017367	RIOK1	98	64.286	Ailuropoda_melanoleuca
ENSPREG00000009237	riok1	91	77.386	ENSACIG00000003735	riok1	88	77.662	Amphilophus_citrinellus
ENSPREG00000009237	riok1	99	73.881	ENSAOCG00000011818	riok1	99	74.067	Amphiprion_ocellaris
ENSPREG00000009237	riok1	99	74.302	ENSAPEG00000001345	riok1	99	74.488	Amphiprion_percula
ENSPREG00000009237	riok1	85	76.957	ENSATEG00000006594	riok1	99	76.957	Anabas_testudineus
ENSPREG00000009237	riok1	87	71.247	ENSAPLG00000004196	RIOK1	100	71.398	Anas_platyrhynchos
ENSPREG00000009237	riok1	100	62.923	ENSACAG00000000695	RIOK1	99	62.811	Anolis_carolinensis
ENSPREG00000009237	riok1	99	54.804	ENSANAG00000023777	RIOK1	85	58.907	Aotus_nancymaae
ENSPREG00000009237	riok1	100	74.259	ENSACLG00000015799	riok1	100	74.954	Astatotilapia_calliptera
ENSPREG00000009237	riok1	99	63.428	ENSAMXG00000015286	riok1	85	70.143	Astyanax_mexicanus
ENSPREG00000009237	riok1	99	63.441	ENSBTAG00000013821	RIOK1	98	62.903	Bos_taurus
ENSPREG00000009237	riok1	75	49.754	WBGene00019698	riok-1	77	49.261	Caenorhabditis_elegans
ENSPREG00000009237	riok1	87	69.602	ENSCJAG00000042960	RIOK1	98	62.837	Callithrix_jacchus
ENSPREG00000009237	riok1	89	69.691	ENSCAFG00000009563	RIOK1	98	64.337	Canis_familiaris
ENSPREG00000009237	riok1	80	70.629	ENSCAFG00020013233	RIOK1	85	67.086	Canis_lupus_dingo
ENSPREG00000009237	riok1	99	63.016	ENSCHIG00000001534	RIOK1	98	63.262	Capra_hircus
ENSPREG00000009237	riok1	68	65.517	ENSTSYG00000011368	RIOK1	100	64.526	Carlito_syrichta
ENSPREG00000009237	riok1	82	69.042	ENSCAPG00000008489	RIOK1	99	69.330	Cavia_aperea
ENSPREG00000009237	riok1	97	62.230	ENSCPOG00000009882	RIOK1	99	63.492	Cavia_porcellus
ENSPREG00000009237	riok1	91	67.540	ENSCCAG00000024061	RIOK1	86	67.814	Cebus_capucinus
ENSPREG00000009237	riok1	87	69.811	ENSCATG00000001548	RIOK1	98	62.590	Cercocebus_atys
ENSPREG00000009237	riok1	99	61.989	ENSCLAG00000003522	RIOK1	98	62.903	Chinchilla_lanigera
ENSPREG00000009237	riok1	79	70.784	ENSCSAG00000007396	RIOK1	88	64.632	Chlorocebus_sabaeus
ENSPREG00000009237	riok1	65	81.026	ENSCHOG00000001873	RIOK1	60	83.333	Choloepus_hoffmanni
ENSPREG00000009237	riok1	75	75.315	ENSCPBG00000008685	RIOK1	82	66.949	Chrysemys_picta_bellii
ENSPREG00000009237	riok1	87	69.811	ENSCANG00000032919	RIOK1	84	69.602	Colobus_angolensis_palliatus
ENSPREG00000009237	riok1	99	62.167	ENSCGRG00001018868	Riok1	99	61.649	Cricetulus_griseus_chok1gshd
ENSPREG00000009237	riok1	99	62.167	ENSCGRG00000008015	Riok1	99	61.649	Cricetulus_griseus_crigri
ENSPREG00000009237	riok1	91	53.498	ENSCSEG00000015014	riok1	87	53.416	Cynoglossus_semilaevis
ENSPREG00000009237	riok1	59	71.019	ENSCVAG00000011291	riok1	99	71.019	Cyprinodon_variegatus
ENSPREG00000009237	riok1	100	64.580	ENSDARG00000016399	riok1	99	66.004	Danio_rerio
ENSPREG00000009237	riok1	88	69.979	ENSDNOG00000015813	RIOK1	98	63.167	Dasypus_novemcinctus
ENSPREG00000009237	riok1	100	61.930	ENSDORG00000008530	Riok1	99	62.478	Dipodomys_ordii
ENSPREG00000009237	riok1	85	52.854	FBgn0036187	RIOK1	79	52.211	Drosophila_melanogaster
ENSPREG00000009237	riok1	99	63.177	ENSETEG00000020273	RIOK1	98	62.681	Echinops_telfairi
ENSPREG00000009237	riok1	98	57.658	ENSEBUG00000013672	riok1	87	63.673	Eptatretus_burgeri
ENSPREG00000009237	riok1	79	71.021	ENSEASG00005012032	RIOK1	85	65.353	Equus_asinus_asinus
ENSPREG00000009237	riok1	87	69.811	ENSECAG00000009007	RIOK1	99	62.877	Equus_caballus
ENSPREG00000009237	riok1	79	60.238	ENSEEUG00000007123	RIOK1	90	62.785	Erinaceus_europaeus
ENSPREG00000009237	riok1	100	65.392	ENSELUG00000017029	riok1	99	66.851	Esox_lucius
ENSPREG00000009237	riok1	89	68.660	ENSFCAG00000027290	RIOK1	98	62.500	Felis_catus
ENSPREG00000009237	riok1	100	63.879	ENSFALG00000013244	RIOK1	99	64.235	Ficedula_albicollis
ENSPREG00000009237	riok1	88	68.750	ENSFDAG00000019139	RIOK1	98	62.724	Fukomys_damarensis
ENSPREG00000009237	riok1	83	82.063	ENSFHEG00000021419	riok1	99	83.883	Fundulus_heteroclitus
ENSPREG00000009237	riok1	77	71.078	ENSGMOG00000018668	riok1	94	71.642	Gadus_morhua
ENSPREG00000009237	riok1	59	63.385	ENSGALG00000012795	RIOK1	100	63.692	Gallus_gallus
ENSPREG00000009237	riok1	87	78.821	ENSGAFG00000004091	riok1	79	78.186	Gambusia_affinis
ENSPREG00000009237	riok1	96	71.785	ENSGACG00000002496	riok1	94	77.824	Gasterosteus_aculeatus
ENSPREG00000009237	riok1	74	74.936	ENSGAGG00000002262	RIOK1	96	66.519	Gopherus_agassizii
ENSPREG00000009237	riok1	87	60.632	ENSGGOG00000011037	RIOK1	77	65.306	Gorilla_gorilla
ENSPREG00000009237	riok1	99	62.075	ENSHGLG00000008699	RIOK1	98	62.274	Heterocephalus_glaber_female
ENSPREG00000009237	riok1	99	62.075	ENSHGLG00100008188	RIOK1	98	62.094	Heterocephalus_glaber_male
ENSPREG00000009237	riok1	91	73.061	ENSHCOG00000013275	riok1	90	73.706	Hippocampus_comes
ENSPREG00000009237	riok1	100	64.912	ENSIPUG00000003290	riok1	87	70.588	Ictalurus_punctatus
ENSPREG00000009237	riok1	87	69.182	ENSSTOG00000009289	RIOK1	98	62.545	Ictidomys_tridecemlineatus
ENSPREG00000009237	riok1	88	69.602	ENSJJAG00000015152	Riok1	98	62.816	Jaculus_jaculus
ENSPREG00000009237	riok1	73	80.463	ENSKMAG00000019378	riok1	100	80.463	Kryptolebias_marmoratus
ENSPREG00000009237	riok1	91	76.230	ENSLBEG00000016650	riok1	87	77.893	Labrus_bergylta
ENSPREG00000009237	riok1	90	60.656	ENSLACG00000000300	RIOK1	98	56.373	Latimeria_chalumnae
ENSPREG00000009237	riok1	99	66.606	ENSLOCG00000011728	riok1	98	66.243	Lepisosteus_oculatus
ENSPREG00000009237	riok1	99	65.018	ENSLAFG00000005504	RIOK1	98	65.314	Loxodonta_africana
ENSPREG00000009237	riok1	87	69.811	ENSMFAG00000029990	RIOK1	98	62.950	Macaca_fascicularis
ENSPREG00000009237	riok1	87	69.602	ENSMMUG00000015577	RIOK1	98	62.770	Macaca_mulatta
ENSPREG00000009237	riok1	87	66.876	ENSMNEG00000034396	RIOK1	96	64.159	Macaca_nemestrina
ENSPREG00000009237	riok1	87	69.811	ENSMLEG00000026327	RIOK1	98	62.590	Mandrillus_leucophaeus
ENSPREG00000009237	riok1	100	72.395	ENSMAMG00000019557	riok1	100	72.212	Mastacembelus_armatus
ENSPREG00000009237	riok1	100	73.985	ENSMZEG00005019482	riok1	100	75.416	Maylandia_zebra
ENSPREG00000009237	riok1	99	64.144	ENSMGAG00000003816	RIOK1	98	64.865	Meleagris_gallopavo
ENSPREG00000009237	riok1	99	61.607	ENSMAUG00000012751	Riok1	99	62.478	Mesocricetus_auratus
ENSPREG00000009237	riok1	88	68.542	ENSMICG00000044301	RIOK1	83	61.939	Microcebus_murinus
ENSPREG00000009237	riok1	99	61.759	ENSMOCG00000017032	Riok1	99	61.580	Microtus_ochrogaster
ENSPREG00000009237	riok1	87	68.789	ENSMMOG00000020598	riok1	87	68.994	Mola_mola
ENSPREG00000009237	riok1	87	69.409	ENSMODG00000009964	RIOK1	98	63.262	Monodelphis_domestica
ENSPREG00000009237	riok1	91	67.568	ENSMALG00000019982	riok1	92	68.143	Monopterus_albus
ENSPREG00000009237	riok1	99	61.634	MGP_CAROLIEiJ_G0018439	Riok1	98	62.230	Mus_caroli
ENSPREG00000009237	riok1	87	68.267	ENSMUSG00000021428	Riok1	92	68.947	Mus_musculus
ENSPREG00000009237	riok1	99	61.101	MGP_PahariEiJ_G0019507	Riok1	98	62.230	Mus_pahari
ENSPREG00000009237	riok1	87	68.134	MGP_SPRETEiJ_G0019319	Riok1	98	62.050	Mus_spretus
ENSPREG00000009237	riok1	89	70.226	ENSMPUG00000000570	RIOK1	98	64.758	Mustela_putorius_furo
ENSPREG00000009237	riok1	99	63.685	ENSMLUG00000015312	RIOK1	98	63.685	Myotis_lucifugus
ENSPREG00000009237	riok1	87	68.973	ENSNGAG00000021734	Riok1	98	62.929	Nannospalax_galili
ENSPREG00000009237	riok1	75	81.864	ENSNBRG00000017489	riok1	83	79.350	Neolamprologus_brichardi
ENSPREG00000009237	riok1	88	62.716	ENSNLEG00000011621	RIOK1	98	56.192	Nomascus_leucogenys
ENSPREG00000009237	riok1	75	55.663	ENSMEUG00000006679	-	72	55.700	Notamacropus_eugenii
ENSPREG00000009237	riok1	70	65.499	ENSOPRG00000009524	RIOK1	100	65.499	Ochotona_princeps
ENSPREG00000009237	riok1	59	66.129	ENSODEG00000005663	RIOK1	97	56.667	Octodon_degus
ENSPREG00000009237	riok1	100	71.273	ENSONIG00000014010	riok1	99	72.182	Oreochromis_niloticus
ENSPREG00000009237	riok1	85	70.108	ENSOANG00000012553	RIOK1	99	70.842	Ornithorhynchus_anatinus
ENSPREG00000009237	riok1	99	60.854	ENSOCUG00000011824	RIOK1	98	62.837	Oryctolagus_cuniculus
ENSPREG00000009237	riok1	100	73.752	ENSORLG00000008221	riok1	100	73.383	Oryzias_latipes
ENSPREG00000009237	riok1	99	71.881	ENSORLG00020013838	riok1	70	72.067	Oryzias_latipes_hni
ENSPREG00000009237	riok1	100	73.519	ENSORLG00015009817	riok1	99	73.889	Oryzias_latipes_hsok
ENSPREG00000009237	riok1	100	75.000	ENSOMEG00000002758	riok1	89	75.000	Oryzias_melastigma
ENSPREG00000009237	riok1	88	64.017	ENSOGAG00000010192	RIOK1	98	58.877	Otolemur_garnettii
ENSPREG00000009237	riok1	99	62.989	ENSOARG00000017747	RIOK1	98	63.441	Ovis_aries
ENSPREG00000009237	riok1	87	60.625	ENSPPAG00000016349	RIOK1	100	61.129	Pan_paniscus
ENSPREG00000009237	riok1	89	68.930	ENSPPRG00000001932	RIOK1	98	62.032	Panthera_pardus
ENSPREG00000009237	riok1	89	68.930	ENSPTIG00000018545	RIOK1	98	62.032	Panthera_tigris_altaica
ENSPREG00000009237	riok1	87	69.602	ENSPTRG00000017700	RIOK1	98	61.939	Pan_troglodytes
ENSPREG00000009237	riok1	87	69.811	ENSPANG00000016522	RIOK1	98	62.410	Papio_anubis
ENSPREG00000009237	riok1	99	66.362	ENSPKIG00000006442	riok1	99	66.969	Paramormyrops_kingsleyae
ENSPREG00000009237	riok1	99	65.280	ENSPSIG00000006488	RIOK1	97	65.280	Pelodiscus_sinensis
ENSPREG00000009237	riok1	78	74.755	ENSPMGG00000017807	riok1	96	71.667	Periophthalmus_magnuspinnatus
ENSPREG00000009237	riok1	87	68.344	ENSPEMG00000017844	Riok1	98	63.243	Peromyscus_maniculatus_bairdii
ENSPREG00000009237	riok1	73	61.800	ENSPMAG00000006351	riok1	97	62.836	Petromyzon_marinus
ENSPREG00000009237	riok1	79	69.928	ENSPCIG00000012653	RIOK1	89	63.147	Phascolarctos_cinereus
ENSPREG00000009237	riok1	100	96.045	ENSPFOG00000011532	riok1	100	96.045	Poecilia_formosa
ENSPREG00000009237	riok1	100	95.857	ENSPLAG00000001341	riok1	100	95.857	Poecilia_latipinna
ENSPREG00000009237	riok1	100	96.234	ENSPMEG00000007710	riok1	100	96.234	Poecilia_mexicana
ENSPREG00000009237	riok1	87	69.392	ENSPPYG00000016207	RIOK1	84	69.182	Pongo_abelii
ENSPREG00000009237	riok1	99	53.818	ENSPCAG00000007892	RIOK1	98	54.380	Procavia_capensis
ENSPREG00000009237	riok1	99	63.214	ENSPVAG00000014091	RIOK1	98	63.571	Pteropus_vampyrus
ENSPREG00000009237	riok1	59	76.358	ENSPNYG00000004465	riok1	100	76.997	Pundamilia_nyererei
ENSPREG00000009237	riok1	100	66.308	ENSPNAG00000015435	riok1	99	65.832	Pygocentrus_nattereri
ENSPREG00000009237	riok1	93	64.410	ENSRNOG00000014049	Riok1	99	68.534	Rattus_norvegicus
ENSPREG00000009237	riok1	87	69.392	ENSRBIG00000036685	RIOK1	84	69.182	Rhinopithecus_bieti
ENSPREG00000009237	riok1	87	69.602	ENSRROG00000036611	RIOK1	84	69.392	Rhinopithecus_roxellana
ENSPREG00000009237	riok1	66	38.830	YOR119C	RIO1	98	35.976	Saccharomyces_cerevisiae
ENSPREG00000009237	riok1	99	63.410	ENSSBOG00000012588	RIOK1	98	62.837	Saimiri_boliviensis_boliviensis
ENSPREG00000009237	riok1	74	72.727	ENSSHAG00000003091	RIOK1	91	65.539	Sarcophilus_harrisii
ENSPREG00000009237	riok1	90	70.697	ENSSFOG00015001035	riok1	99	66.179	Scleropages_formosus
ENSPREG00000009237	riok1	59	71.338	ENSSDUG00000007291	riok1	100	72.293	Seriola_dumerili
ENSPREG00000009237	riok1	99	74.488	ENSSLDG00000017657	riok1	99	74.860	Seriola_lalandi_dorsalis
ENSPREG00000009237	riok1	85	62.996	ENSSPUG00000007624	RIOK1	85	60.084	Sphenodon_punctatus
ENSPREG00000009237	riok1	99	75.803	ENSSPAG00000022710	riok1	99	75.849	Stegastes_partitus
ENSPREG00000009237	riok1	99	61.871	ENSSSCG00000001024	RIOK1	98	62.118	Sus_scrofa
ENSPREG00000009237	riok1	89	69.388	ENSTGUG00000002331	RIOK1	99	63.845	Taeniopygia_guttata
ENSPREG00000009237	riok1	53	63.251	ENSTRUG00000001575	-	100	63.251	Takifugu_rubripes
ENSPREG00000009237	riok1	82	63.048	ENSTRUG00000002854	riok1	95	64.083	Takifugu_rubripes
ENSPREG00000009237	riok1	100	65.766	ENSTNIG00000003078	riok1	99	66.486	Tetraodon_nigroviridis
ENSPREG00000009237	riok1	99	60.252	ENSTBEG00000016730	RIOK1	98	60.072	Tupaia_belangeri
ENSPREG00000009237	riok1	73	75.000	ENSTTRG00000017335	RIOK1	81	75.000	Tursiops_truncatus
ENSPREG00000009237	riok1	91	63.529	ENSUAMG00000003721	RIOK1	85	67.086	Ursus_americanus
ENSPREG00000009237	riok1	99	63.978	ENSUMAG00000018461	RIOK1	98	64.937	Ursus_maritimus
ENSPREG00000009237	riok1	59	79.464	ENSVPAG00000010813	-	52	80.556	Vicugna_pacos
ENSPREG00000009237	riok1	89	70.103	ENSVVUG00000005018	RIOK1	98	64.337	Vulpes_vulpes
ENSPREG00000009237	riok1	91	65.918	ENSXETG00000020436	riok1	81	69.196	Xenopus_tropicalis
ENSPREG00000009237	riok1	87	91.247	ENSXCOG00000000245	riok1	100	91.247	Xiphophorus_couchianus
ENSPREG00000009237	riok1	93	93.522	ENSXMAG00000014572	riok1	97	94.737	Xiphophorus_maculatus