EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000009325 (Gene tree)
Gene ID
103456921
Gene Symbol
u2surp
Alias
mp:zf637-1-000918|si:dkey-181m9.9|wu:fa03e02|wu:fb38b01|wu:fc75d03
Full Name
U2 snRNP associated SURP domain containing
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
11840 bases
Position
chrLG20:24082078-24093917
Accession
103456921
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000013820cwf21PF08312.121.3e-1111
ENSPREP00000013806cwf21PF08312.121.5e-1111
ENSPREP00000013820RRM_1PF00076.222.4e-1511
ENSPREP00000013806RRM_1PF00076.222.8e-1511
ENSPREP00000013820SurpPF01805.201.5e-1811
ENSPREP00000013806SurpPF01805.201.9e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000013963-2830-ENSPREP00000013820863 (aa)--
ENSPRET00000013949-2886XM_008396802ENSPREP00000013806961 (aa)XP_008395024-
Gene Model
Click here to download ENSPREG00000009325's gene model file
Pathways
Pathway IDPathway NameSource
pret03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009325's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000009325u2surp9349.945ENSPREG00000023067zgc:1630989151.001
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000009325u2surp9872.464ENSG00000163714U2SURP8278.022Homo_sapiens
ENSPREG00000009325u2surp9392.069ENSAPOG00000011345u2surp9487.243Acanthochromis_polyacanthus
ENSPREG00000009325u2surp9351.322ENSAPOG00000005569zgc:1630988855.695Acanthochromis_polyacanthus
ENSPREG00000009325u2surp9872.464ENSAMEG00000012757U2SURP7976.208Ailuropoda_melanoleuca
ENSPREG00000009325u2surp9389.351ENSACIG00000018537u2surp9887.692Amphilophus_citrinellus
ENSPREG00000009325u2surp9444.824ENSACIG00000011968zgc:1630988747.415Amphilophus_citrinellus
ENSPREG00000009325u2surp9351.485ENSAOCG00000008482zgc:1630988855.444Amphiprion_ocellaris
ENSPREG00000009325u2surp9390.476ENSAOCG00000003589u2surp9387.568Amphiprion_ocellaris
ENSPREG00000009325u2surp9351.485ENSAPEG00000001348zgc:1630988855.444Amphiprion_percula
ENSPREG00000009325u2surp9390.354ENSAPEG00000016652u2surp9485.268Amphiprion_percula
ENSPREG00000009325u2surp9089.227ENSATEG00000006321u2surp9485.051Anabas_testudineus
ENSPREG00000009325u2surp8854.393ENSATEG00000016576zgc:1630989054.000Anabas_testudineus
ENSPREG00000009325u2surp9772.973ENSAPLG00000002348U2SURP8576.521Anas_platyrhynchos
ENSPREG00000009325u2surp9971.113ENSACAG00000009512U2SURP8173.776Anolis_carolinensis
ENSPREG00000009325u2surp9872.464ENSANAG00000035774U2SURP8776.087Aotus_nancymaae
ENSPREG00000009325u2surp9488.943ENSACLG00000027507u2surp9485.278Astatotilapia_calliptera
ENSPREG00000009325u2surp9350.277ENSACLG00000016647zgc:1630989748.300Astatotilapia_calliptera
ENSPREG00000009325u2surp8852.774ENSAMXG00000005081zgc:1630989053.875Astyanax_mexicanus
ENSPREG00000009325u2surp9778.363ENSAMXG00000006189u2surp9278.035Astyanax_mexicanus
ENSPREG00000009325u2surp8132.746WBGene00015581C07H6.48432.190Caenorhabditis_elegans
ENSPREG00000009325u2surp9872.671ENSCJAG00000001639U2SURP8475.937Callithrix_jacchus
ENSPREG00000009325u2surp9872.567ENSCAFG00000007973U2SURP7975.937Canis_familiaris
ENSPREG00000009325u2surp9872.464ENSCAFG00020010497U2SURP9570.948Canis_lupus_dingo
ENSPREG00000009325u2surp9872.539ENSCHIG00000023892U2SURP8076.029Capra_hircus
ENSPREG00000009325u2surp9872.464ENSTSYG00000008889U2SURP8276.485Carlito_syrichta
ENSPREG00000009325u2surp8471.638ENSCAPG00000016009U2SURP8175.405Cavia_aperea
ENSPREG00000009325u2surp8373.479ENSCPOG00000011656U2SURP8478.003Cavia_porcellus
ENSPREG00000009325u2surp9773.529ENSCCAG00000032530U2SURP8477.457Cebus_capucinus
ENSPREG00000009325u2surp9872.567ENSCATG00000039024U2SURP8475.899Cercocebus_atys
ENSPREG00000009325u2surp8360.753ENSCLAG00000011055-8161.600Chinchilla_lanigera
ENSPREG00000009325u2surp9971.630ENSCLAG00000001331-8575.117Chinchilla_lanigera
ENSPREG00000009325u2surp9872.567ENSCSAG00000011321U2SURP7975.908Chlorocebus_sabaeus
ENSPREG00000009325u2surp6879.070ENSCHOG00000001300U2SURP5880.307Choloepus_hoffmanni
ENSPREG00000009325u2surp9971.984ENSCPBG00000008969U2SURP8975.995Chrysemys_picta_bellii
ENSPREG00000009325u2surp9353.005ENSCING00000018030-9850.277Ciona_intestinalis
ENSPREG00000009325u2surp9351.422ENSCSAVG00000009039-10051.633Ciona_savignyi
ENSPREG00000009325u2surp9872.464ENSCANG00000032307U2SURP8475.779Colobus_angolensis_palliatus
ENSPREG00000009325u2surp9971.529ENSCGRG00001019402U2surp8575.000Cricetulus_griseus_chok1gshd
ENSPREG00000009325u2surp8389.474ENSCGRG00000014315U2surp9977.637Cricetulus_griseus_crigri
ENSPREG00000009325u2surp9650.375ENSCSEG00000020119zgc:1630988853.942Cynoglossus_semilaevis
ENSPREG00000009325u2surp9486.772ENSCSEG00000015150u2surp9983.115Cynoglossus_semilaevis
ENSPREG00000009325u2surp9350.496ENSCVAG00000012334zgc:1630988854.545Cyprinodon_variegatus
ENSPREG00000009325u2surp9395.528ENSCVAG00000002961u2surp9488.415Cyprinodon_variegatus
ENSPREG00000009325u2surp9480.552ENSDARG00000061490u2surp9987.050Danio_rerio
ENSPREG00000009325u2surp9157.869ENSDARG00000078911zgc:1630989856.087Danio_rerio
ENSPREG00000009325u2surp9872.182ENSDNOG00000006427U2SURP7975.995Dasypus_novemcinctus
ENSPREG00000009325u2surp9444.676FBgn0034572CG93468945.201Drosophila_melanogaster
ENSPREG00000009325u2surp8073.975ENSETEG00000000149U2SURP6973.156Echinops_telfairi
ENSPREG00000009325u2surp6457.050ENSEBUG00000003543u2surp7456.888Eptatretus_burgeri
ENSPREG00000009325u2surp9872.567ENSEASG00005000213U2SURP8476.329Equus_asinus_asinus
ENSPREG00000009325u2surp9872.567ENSECAG00000022460U2SURP8476.329Equus_caballus
ENSPREG00000009325u2surp8270.426ENSEEUG00000013553U2SURP7071.253Erinaceus_europaeus
ENSPREG00000009325u2surp9158.586ENSELUG00000017966zgc:1630988658.534Esox_lucius
ENSPREG00000009325u2surp9977.015ENSELUG00000002150u2surp8483.550Esox_lucius
ENSPREG00000009325u2surp9872.567ENSFCAG00000012186U2SURP7975.937Felis_catus
ENSPREG00000009325u2surp9970.875ENSFALG00000007070U2SURP8673.878Ficedula_albicollis
ENSPREG00000009325u2surp9971.630ENSFDAG00000013365U2SURP8575.117Fukomys_damarensis
ENSPREG00000009325u2surp9395.167ENSFHEG00000016966u2surp9489.749Fundulus_heteroclitus
ENSPREG00000009325u2surp9448.317ENSFHEG00000014263zgc:1630988853.748Fundulus_heteroclitus
ENSPREG00000009325u2surp9480.190ENSGMOG00000002641u2surp8781.981Gadus_morhua
ENSPREG00000009325u2surp8054.656ENSGMOG00000000935zgc:1630989455.785Gadus_morhua
ENSPREG00000009325u2surp9772.557ENSGALG00000002612U2SURP7578.592Gallus_gallus
ENSPREG00000009325u2surp9595.427ENSGAFG00000004001u2surp10094.995Gambusia_affinis
ENSPREG00000009325u2surp9784.655ENSGACG00000003763u2surp9484.468Gasterosteus_aculeatus
ENSPREG00000009325u2surp9646.521ENSGACG00000020709zgc:1630988850.176Gasterosteus_aculeatus
ENSPREG00000009325u2surp9672.660ENSGAGG00000010747U2SURP8575.646Gopherus_agassizii
ENSPREG00000009325u2surp9872.464ENSGGOG00000005563U2SURP8572.674Gorilla_gorilla
ENSPREG00000009325u2surp9450.551ENSHBUG00000022716zgc:1630989254.963Haplochromis_burtoni
ENSPREG00000009325u2surp8792.000ENSHBUG00000015530u2surp9990.949Haplochromis_burtoni
ENSPREG00000009325u2surp9971.630ENSHGLG00000017227-8575.117Heterocephalus_glaber_female
ENSPREG00000009325u2surp9458.131ENSHGLG00000018851-7657.213Heterocephalus_glaber_female
ENSPREG00000009325u2surp9458.654ENSHGLG00100001134-7657.426Heterocephalus_glaber_male
ENSPREG00000009325u2surp9971.630ENSHGLG00100005796-8575.117Heterocephalus_glaber_male
ENSPREG00000009325u2surp9754.048ENSHGLG00100001176-7656.597Heterocephalus_glaber_male
ENSPREG00000009325u2surp9488.575ENSHCOG00000011508u2surp9479.008Hippocampus_comes
ENSPREG00000009325u2surp9480.414ENSIPUG00000007822u2surp8579.562Ictalurus_punctatus
ENSPREG00000009325u2surp8855.879ENSIPUG00000019652zgc:1630989057.393Ictalurus_punctatus
ENSPREG00000009325u2surp9872.671ENSSTOG00000015997U2SURP7976.029Ictidomys_tridecemlineatus
ENSPREG00000009325u2surp9971.630ENSJJAG00000021595U2surp8575.088Jaculus_jaculus
ENSPREG00000009325u2surp9391.443ENSKMAG00000012083u2surp9985.777Kryptolebias_marmoratus
ENSPREG00000009325u2surp9052.218ENSKMAG00000009727zgc:1630988751.965Kryptolebias_marmoratus
ENSPREG00000009325u2surp9984.199ENSLBEG00000026284u2surp9984.995Labrus_bergylta
ENSPREG00000009325u2surp8249.751ENSLBEG00000002498zgc:1630988655.030Labrus_bergylta
ENSPREG00000009325u2surp9262.958ENSLACG00000008434zgc:1630988563.171Latimeria_chalumnae
ENSPREG00000009325u2surp9671.125ENSLACG00000012318U2SURP8575.558Latimeria_chalumnae
ENSPREG00000009325u2surp8853.440ENSLOCG00000013596zgc:1630988259.827Lepisosteus_oculatus
ENSPREG00000009325u2surp9480.981ENSLOCG00000007828u2surp8582.057Lepisosteus_oculatus
ENSPREG00000009325u2surp9872.464ENSLAFG00000002566U2SURP7976.179Loxodonta_africana
ENSPREG00000009325u2surp9872.464ENSMFAG00000031084U2SURP8575.899Macaca_fascicularis
ENSPREG00000009325u2surp9872.464ENSMMUG00000002775U2SURP8376.485Macaca_mulatta
ENSPREG00000009325u2surp9872.464ENSMNEG00000034553U2SURP8575.899Macaca_nemestrina
ENSPREG00000009325u2surp9872.464ENSMLEG00000021031U2SURP8575.899Mandrillus_leucophaeus
ENSPREG00000009325u2surp9388.400ENSMAMG00000003004u2surp9485.246Mastacembelus_armatus
ENSPREG00000009325u2surp9450.386ENSMAMG00000016977zgc:1630988854.975Mastacembelus_armatus
ENSPREG00000009325u2surp9488.835ENSMZEG00005021991u2surp9485.076Maylandia_zebra
ENSPREG00000009325u2surp9350.277ENSMZEG00005016805zgc:1630989748.345Maylandia_zebra
ENSPREG00000009325u2surp9772.973ENSMGAG00000006549U2SURP8576.521Meleagris_gallopavo
ENSPREG00000009325u2surp9872.567ENSMICG00000049294U2SURP7976.208Microcebus_murinus
ENSPREG00000009325u2surp9971.529ENSMOCG00000000631U2surp8575.000Microtus_ochrogaster
ENSPREG00000009325u2surp9444.812ENSMMOG00000016677zgc:1630989645.382Mola_mola
ENSPREG00000009325u2surp9386.128ENSMMOG00000004474u2surp9681.311Mola_mola
ENSPREG00000009325u2surp9868.130ENSMODG00000010847-8569.494Monodelphis_domestica
ENSPREG00000009325u2surp9871.649ENSMODG00000021242-7874.729Monodelphis_domestica
ENSPREG00000009325u2surp9488.970ENSMALG00000007458u2surp9986.528Monopterus_albus
ENSPREG00000009325u2surp8855.556ENSMALG00000015881zgc:1630989255.125Monopterus_albus
ENSPREG00000009325u2surp9780.249MGP_CAROLIEiJ_G0032530-8077.168Mus_caroli
ENSPREG00000009325u2surp9971.529ENSMUSG00000032407U2surp8574.883Mus_musculus
ENSPREG00000009325u2surp9971.529MGP_PahariEiJ_G0015398U2surp8575.000Mus_pahari
ENSPREG00000009325u2surp9971.529MGP_SPRETEiJ_G0033672U2surp8575.000Mus_spretus
ENSPREG00000009325u2surp9872.464ENSMPUG00000011855U2SURP7976.208Mustela_putorius_furo
ENSPREG00000009325u2surp9969.672ENSMLUG00000014633-7974.213Myotis_lucifugus
ENSPREG00000009325u2surp9872.343ENSMLUG00000002920-8076.053Myotis_lucifugus
ENSPREG00000009325u2surp9971.529ENSNGAG00000013707U2surp8575.000Nannospalax_galili
ENSPREG00000009325u2surp9449.392ENSNBRG00000021199zgc:1630988853.500Neolamprologus_brichardi
ENSPREG00000009325u2surp8486.992ENSNBRG00000017162u2surp9789.076Neolamprologus_brichardi
ENSPREG00000009325u2surp9872.567ENSNLEG00000004915U2SURP8475.899Nomascus_leucogenys
ENSPREG00000009325u2surp8178.947ENSMEUG00000000127U2SURP7078.947Notamacropus_eugenii
ENSPREG00000009325u2surp8596.552ENSOPRG00000011328U2SURP7793.333Ochotona_princeps
ENSPREG00000009325u2surp9971.529ENSODEG00000008767U2SURP8575.000Octodon_degus
ENSPREG00000009325u2surp9488.595ENSONIG00000005909u2surp9486.659Oreochromis_niloticus
ENSPREG00000009325u2surp9450.820ENSONIG00000005263zgc:1630988955.168Oreochromis_niloticus
ENSPREG00000009325u2surp9869.846ENSOANG00000003644U2SURP8472.696Ornithorhynchus_anatinus
ENSPREG00000009325u2surp9872.464ENSOCUG00000012121U2SURP7976.208Oryctolagus_cuniculus
ENSPREG00000009325u2surp9390.447ENSORLG00000010235u2surp9384.607Oryzias_latipes
ENSPREG00000009325u2surp8754.780ENSORLG00000007141zgc:1630989055.293Oryzias_latipes
ENSPREG00000009325u2surp8755.039ENSORLG00020005525zgc:1630989055.542Oryzias_latipes_hni
ENSPREG00000009325u2surp9488.875ENSORLG00020011726u2surp9790.085Oryzias_latipes_hni
ENSPREG00000009325u2surp8754.722ENSORLG00015010776zgc:1630989055.237Oryzias_latipes_hsok
ENSPREG00000009325u2surp9390.447ENSORLG00015011465u2surp9384.498Oryzias_latipes_hsok
ENSPREG00000009325u2surp8754.464ENSOMEG00000002172zgc:1630989055.404Oryzias_melastigma
ENSPREG00000009325u2surp9287.345ENSOMEG00000004962u2surp9886.275Oryzias_melastigma
ENSPREG00000009325u2surp9872.464ENSOGAG00000004335U2SURP7976.208Otolemur_garnettii
ENSPREG00000009325u2surp9871.885ENSOARG00000005871U2SURP7975.937Ovis_aries
ENSPREG00000009325u2surp9872.464ENSPPRG00000022258U2SURP7976.208Panthera_pardus
ENSPREG00000009325u2surp9872.153ENSPTIG00000001167U2SURP7975.845Panthera_tigris_altaica
ENSPREG00000009325u2surp9872.567ENSPTRG00000015489U2SURP8077.457Pan_troglodytes
ENSPREG00000009325u2surp9872.567ENSPANG00000000710U2SURP8775.725Papio_anubis
ENSPREG00000009325u2surp9159.473ENSPKIG00000017920zgc:1630988659.598Paramormyrops_kingsleyae
ENSPREG00000009325u2surp9480.830ENSPKIG00000021859u2surp8580.854Paramormyrops_kingsleyae
ENSPREG00000009325u2surp9672.117ENSPSIG00000016578U2SURP8476.079Pelodiscus_sinensis
ENSPREG00000009325u2surp8850.130ENSPMGG00000008623zgc:1630989868.323Periophthalmus_magnuspinnatus
ENSPREG00000009325u2surp9971.630ENSPEMG00000020825U2surp8574.883Peromyscus_maniculatus_bairdii
ENSPREG00000009325u2surp9870.219ENSPCIG00000004246U2SURP8673.415Phascolarctos_cinereus
ENSPREG00000009325u2surp9397.797ENSPFOG00000014489u2surp9494.098Poecilia_formosa
ENSPREG00000009325u2surp9349.945ENSPFOG00000011956zgc:1630989351.237Poecilia_formosa
ENSPREG00000009325u2surp9349.945ENSPLAG00000008250zgc:1630989351.237Poecilia_latipinna
ENSPREG00000009325u2surp9399.379ENSPLAG00000006816u2surp10092.196Poecilia_latipinna
ENSPREG00000009325u2surp9594.220ENSPMEG00000014599u2surp10094.220Poecilia_mexicana
ENSPREG00000009325u2surp9350.055ENSPMEG00000017413zgc:1630989351.116Poecilia_mexicana
ENSPREG00000009325u2surp9872.332ENSPPYG00000014178U2SURP7975.695Pongo_abelii
ENSPREG00000009325u2surp9869.119ENSPCAG00000015251U2SURP8072.914Procavia_capensis
ENSPREG00000009325u2surp9869.694ENSPCOG00000019599U2SURP8372.524Propithecus_coquereli
ENSPREG00000009325u2surp9868.530ENSPVAG00000016077U2SURP7971.618Pteropus_vampyrus
ENSPREG00000009325u2surp8854.604ENSPNYG00000016481zgc:1630988954.839Pundamilia_nyererei
ENSPREG00000009325u2surp9980.125ENSPNYG00000006246u2surp9980.125Pundamilia_nyererei
ENSPREG00000009325u2surp9480.024ENSPNAG00000001722u2surp9780.285Pygocentrus_nattereri
ENSPREG00000009325u2surp8857.014ENSPNAG00000023885zgc:1630988957.071Pygocentrus_nattereri
ENSPREG00000009325u2surp9971.529ENSRNOG00000008607U2surp8575.000Rattus_norvegicus
ENSPREG00000009325u2surp9871.017ENSRBIG00000041099U2SURP7974.638Rhinopithecus_bieti
ENSPREG00000009325u2surp9872.464ENSRROG00000043548U2SURP8575.779Rhinopithecus_roxellana
ENSPREG00000009325u2surp9872.464ENSSBOG00000027984U2SURP7976.208Saimiri_boliviensis_boliviensis
ENSPREG00000009325u2surp9872.407ENSSHAG00000014407U2SURP7975.695Sarcophilus_harrisii
ENSPREG00000009325u2surp9159.824ENSSFOG00015004962zgc:1630988462.645Scleropages_formosus
ENSPREG00000009325u2surp9482.073ENSSFOG00015010470u2surp8381.608Scleropages_formosus
ENSPREG00000009325u2surp9350.991ENSSMAG00000013442zgc:1630988755.146Scophthalmus_maximus
ENSPREG00000009325u2surp9390.606ENSSMAG00000012475u2surp9483.819Scophthalmus_maximus
ENSPREG00000009325u2surp9489.903ENSSDUG00000006136u2surp9984.691Seriola_dumerili
ENSPREG00000009325u2surp9452.303ENSSDUG00000009881zgc:1630988855.707Seriola_dumerili
ENSPREG00000009325u2surp9451.795ENSSLDG00000020364zgc:1630989557.576Seriola_lalandi_dorsalis
ENSPREG00000009325u2surp9492.725ENSSLDG00000022385u2surp9488.441Seriola_lalandi_dorsalis
ENSPREG00000009325u2surp8673.684ENSSARG00000013779U2SURP6978.758Sorex_araneus
ENSPREG00000009325u2surp9672.775ENSSPUG00000013871U2SURP8576.485Sphenodon_punctatus
ENSPREG00000009325u2surp9351.432ENSSPAG00000000916zgc:1630988955.185Stegastes_partitus
ENSPREG00000009325u2surp9392.193ENSSPAG00000020432u2surp9887.786Stegastes_partitus
ENSPREG00000009325u2surp9872.567ENSSSCG00000011684U2SURP8476.329Sus_scrofa
ENSPREG00000009325u2surp9773.077ENSTGUG00000008687U2SURP8576.671Taeniopygia_guttata
ENSPREG00000009325u2surp9486.303ENSTRUG00000017810u2surp9882.967Takifugu_rubripes
ENSPREG00000009325u2surp9486.972ENSTNIG00000012767u2surp8887.575Tetraodon_nigroviridis
ENSPREG00000009325u2surp8870.164ENSTBEG00000016313U2SURP7571.808Tupaia_belangeri
ENSPREG00000009325u2surp9872.245ENSTTRG00000017170U2SURP7975.971Tursiops_truncatus
ENSPREG00000009325u2surp9872.464ENSUAMG00000028259U2SURP8677.457Ursus_americanus
ENSPREG00000009325u2surp9871.340ENSVPAG00000004697U2SURP8076.087Vicugna_pacos
ENSPREG00000009325u2surp9872.464ENSVVUG00000021495U2SURP8476.208Vulpes_vulpes
ENSPREG00000009325u2surp9972.848ENSXETG00000022133u2surp8575.537Xenopus_tropicalis
ENSPREG00000009325u2surp9496.010ENSXCOG00000011427u2surp9298.173Xiphophorus_couchianus
ENSPREG00000009325u2surp7651.142ENSXCOG00000007025zgc:1630989053.333Xiphophorus_couchianus
ENSPREG00000009325u2surp9349.723ENSXMAG00000012662zgc:1630989351.590Xiphophorus_maculatus
ENSPREG00000009325u2surp9295.636ENSXMAG00000002608u2surp9991.785Xiphophorus_maculatus

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