EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3966 bases
Position: chrKK215288.1:781426-785391
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013851	zf-C2H2	PF00096.26	4e-11	1	2
ENSPREP00000013851	zf-C2H2	PF00096.26	4e-11	2	2
ENSPREP00000013851	zf-met	PF12874.7	7.5e-07	1	2
ENSPREP00000013851	zf-met	PF12874.7	7.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000013996	-	279	-	ENSPREP00000013851	92 (aa)	-	-

Gene Model

Click here to download ENSPREG00000009407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009407	-	90	52.381	ENSPREG00000004306	-	75	45.000
ENSPREG00000009407	-	90	56.716	ENSPREG00000009372	-	59	44.186
ENSPREG00000009407	-	91	52.857	ENSPREG00000008826	-	58	52.857
ENSPREG00000009407	-	88	42.553	ENSPREG00000021924	-	76	42.553
ENSPREG00000009407	-	90	50.000	ENSPREG00000001713	-	68	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009407	-	95	51.429	ENSAPOG00000022086	-	72	48.837	Acanthochromis_polyacanthus
ENSPREG00000009407	-	90	45.714	ENSAPOG00000013065	-	77	45.714	Acanthochromis_polyacanthus
ENSPREG00000009407	-	79	43.836	ENSAPEG00000009099	-	84	43.836	Amphiprion_percula
ENSPREG00000009407	-	90	62.222	ENSAPEG00000007389	-	52	62.222	Amphiprion_percula
ENSPREG00000009407	-	88	50.000	ENSAPEG00000012583	-	96	50.000	Amphiprion_percula
ENSPREG00000009407	-	92	52.239	ENSAPEG00000005462	-	86	50.725	Amphiprion_percula
ENSPREG00000009407	-	90	53.623	ENSACLG00000018707	-	77	53.623	Astatotilapia_calliptera
ENSPREG00000009407	-	98	49.351	ENSACLG00000023305	-	86	49.351	Astatotilapia_calliptera
ENSPREG00000009407	-	90	52.564	ENSCVAG00000012207	-	85	52.564	Cyprinodon_variegatus
ENSPREG00000009407	-	77	44.898	ENSFHEG00000010152	-	69	44.898	Fundulus_heteroclitus
ENSPREG00000009407	-	90	55.224	ENSFHEG00000018625	-	60	55.224	Fundulus_heteroclitus
ENSPREG00000009407	-	95	54.762	ENSHBUG00000015942	-	53	52.174	Haplochromis_burtoni
ENSPREG00000009407	-	96	45.455	ENSKMAG00000009522	-	52	45.455	Kryptolebias_marmoratus
ENSPREG00000009407	-	90	44.776	ENSKMAG00000003176	-	96	44.776	Kryptolebias_marmoratus
ENSPREG00000009407	-	84	47.143	ENSMZEG00005027909	-	55	37.500	Maylandia_zebra
ENSPREG00000009407	-	92	54.688	ENSMMOG00000000299	-	90	51.923	Mola_mola
ENSPREG00000009407	-	90	53.731	ENSMALG00000012155	-	61	51.163	Monopterus_albus
ENSPREG00000009407	-	90	47.826	ENSPMEG00000020915	-	65	47.826	Poecilia_mexicana
ENSPREG00000009407	-	90	55.714	ENSPNYG00000005755	-	69	55.714	Pundamilia_nyererei
ENSPREG00000009407	-	57	44.231	ENSPNYG00000001708	-	72	44.231	Pundamilia_nyererei
ENSPREG00000009407	-	90	53.623	ENSPNYG00000003744	-	77	53.623	Pundamilia_nyererei
ENSPREG00000009407	-	95	50.725	ENSSDUG00000006426	-	99	50.725	Seriola_dumerili
ENSPREG00000009407	-	95	46.875	ENSSDUG00000000786	-	92	52.083	Seriola_dumerili
ENSPREG00000009407	-	75	47.826	ENSSLDG00000009582	-	94	47.826	Seriola_lalandi_dorsalis
ENSPREG00000009407	-	74	53.125	ENSSPAG00000000064	-	68	53.125	Stegastes_partitus
ENSPREG00000009407	-	92	50.000	ENSSPAG00000008610	-	55	51.064	Stegastes_partitus