EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000009470 (Gene tree)
Gene ID: 103469571
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4622 bases
Position: chrLG1:21274983-21279604
Accession: 103469571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000013941	RNA_pol_I_A49	PF06870.12	1.3e-115	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014085	-	1245	XM_008417333	ENSPREP00000013941	414 (aa)	XP_008415555	UPI0004A2E7C5

Gene Model

Click here to download ENSPREG00000009470's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009470	polr1e	95	43.434	ENSG00000137054	POLR1E	93	44.020	Homo_sapiens
ENSPREG00000009470	polr1e	100	67.067	ENSAPOG00000012452	polr1e	100	67.067	Acanthochromis_polyacanthus
ENSPREG00000009470	polr1e	98	40.088	ENSAMEG00000010193	POLR1E	94	40.088	Ailuropoda_melanoleuca
ENSPREG00000009470	polr1e	100	65.072	ENSACIG00000009884	polr1e	99	68.622	Amphilophus_citrinellus
ENSPREG00000009470	polr1e	100	73.558	ENSAOCG00000005665	polr1e	100	73.558	Amphiprion_ocellaris
ENSPREG00000009470	polr1e	100	74.038	ENSAPEG00000020581	polr1e	100	74.038	Amphiprion_percula
ENSPREG00000009470	polr1e	100	75.000	ENSATEG00000020609	polr1e	100	75.000	Anabas_testudineus
ENSPREG00000009470	polr1e	81	39.119	ENSAPLG00000010340	POLR1E	100	39.119	Anas_platyrhynchos
ENSPREG00000009470	polr1e	99	43.478	ENSANAG00000038046	POLR1E	98	43.478	Aotus_nancymaae
ENSPREG00000009470	polr1e	100	72.837	ENSACLG00000013685	polr1e	99	72.837	Astatotilapia_calliptera
ENSPREG00000009470	polr1e	99	54.589	ENSAMXG00000018181	polr1e	99	54.589	Astyanax_mexicanus
ENSPREG00000009470	polr1e	98	46.324	ENSBTAG00000012243	POLR1E	97	46.324	Bos_taurus
ENSPREG00000009470	polr1e	95	40.806	ENSCJAG00000010512	POLR1E	92	44.565	Callithrix_jacchus
ENSPREG00000009470	polr1e	99	43.237	ENSCAFG00000002377	POLR1E	98	43.237	Canis_familiaris
ENSPREG00000009470	polr1e	99	43.478	ENSCAFG00020017851	POLR1E	98	43.478	Canis_lupus_dingo
ENSPREG00000009470	polr1e	98	45.833	ENSCHIG00000019479	POLR1E	97	45.833	Capra_hircus
ENSPREG00000009470	polr1e	99	43.478	ENSTSYG00000002075	POLR1E	98	43.478	Carlito_syrichta
ENSPREG00000009470	polr1e	70	42.424	ENSCAPG00000015653	POLR1E	99	42.424	Cavia_aperea
ENSPREG00000009470	polr1e	98	44.928	ENSCPOG00000009965	POLR1E	97	44.928	Cavia_porcellus
ENSPREG00000009470	polr1e	99	38.835	ENSCCAG00000029460	POLR1E	98	38.835	Cebus_capucinus
ENSPREG00000009470	polr1e	90	48.333	ENSCATG00000031732	POLR1E	91	48.333	Cercocebus_atys
ENSPREG00000009470	polr1e	86	46.409	ENSCLAG00000012701	POLR1E	95	46.409	Chinchilla_lanigera
ENSPREG00000009470	polr1e	94	44.529	ENSCSAG00000010782	POLR1E	93	44.529	Chlorocebus_sabaeus
ENSPREG00000009470	polr1e	95	37.594	ENSCHOG00000013024	POLR1E	82	37.594	Choloepus_hoffmanni
ENSPREG00000009470	polr1e	99	45.823	ENSCPBG00000006923	POLR1E	99	45.823	Chrysemys_picta_bellii
ENSPREG00000009470	polr1e	95	44.192	ENSCANG00000036112	POLR1E	91	49.167	Colobus_angolensis_palliatus
ENSPREG00000009470	polr1e	99	41.928	ENSCGRG00001006197	Polr1e	95	41.928	Cricetulus_griseus_chok1gshd
ENSPREG00000009470	polr1e	99	41.446	ENSCGRG00000006430	Polr1e	95	41.446	Cricetulus_griseus_crigri
ENSPREG00000009470	polr1e	99	65.217	ENSCSEG00000005121	polr1e	99	65.217	Cynoglossus_semilaevis
ENSPREG00000009470	polr1e	100	82.410	ENSCVAG00000019759	polr1e	100	82.410	Cyprinodon_variegatus
ENSPREG00000009470	polr1e	97	55.583	ENSDARG00000006434	polr1e	100	55.181	Danio_rerio
ENSPREG00000009470	polr1e	99	36.820	ENSDNOG00000010257	POLR1E	99	36.820	Dasypus_novemcinctus
ENSPREG00000009470	polr1e	83	41.429	ENSETEG00000018204	POLR1E	96	42.000	Echinops_telfairi
ENSPREG00000009470	polr1e	99	43.478	ENSEASG00005000675	POLR1E	98	43.478	Equus_asinus_asinus
ENSPREG00000009470	polr1e	99	43.478	ENSECAG00000014669	POLR1E	98	43.478	Equus_caballus
ENSPREG00000009470	polr1e	95	39.394	ENSEEUG00000011928	POLR1E	84	39.394	Erinaceus_europaeus
ENSPREG00000009470	polr1e	99	65.942	ENSELUG00000008150	polr1e	99	65.942	Esox_lucius
ENSPREG00000009470	polr1e	99	44.096	ENSFCAG00000013081	POLR1E	98	44.096	Felis_catus
ENSPREG00000009470	polr1e	96	42.079	ENSFALG00000012950	POLR1E	99	42.079	Ficedula_albicollis
ENSPREG00000009470	polr1e	98	46.135	ENSFDAG00000016917	POLR1E	97	46.135	Fukomys_damarensis
ENSPREG00000009470	polr1e	100	82.452	ENSFHEG00000009801	polr1e	100	82.452	Fundulus_heteroclitus
ENSPREG00000009470	polr1e	99	52.983	ENSGMOG00000003336	POLR1E	99	52.983	Gadus_morhua
ENSPREG00000009470	polr1e	99	43.333	ENSGALG00000005395	POLR1E	99	43.333	Gallus_gallus
ENSPREG00000009470	polr1e	100	90.361	ENSGAFG00000004850	polr1e	100	90.361	Gambusia_affinis
ENSPREG00000009470	polr1e	100	67.303	ENSGACG00000016087	polr1e	100	67.303	Gasterosteus_aculeatus
ENSPREG00000009470	polr1e	97	41.769	ENSGAGG00000001659	POLR1E	99	41.487	Gopherus_agassizii
ENSPREG00000009470	polr1e	96	43.532	ENSGGOG00000001882	POLR1E	94	45.736	Gorilla_gorilla
ENSPREG00000009470	polr1e	100	72.837	ENSHBUG00000002559	polr1e	99	72.837	Haplochromis_burtoni
ENSPREG00000009470	polr1e	98	45.894	ENSHGLG00000002036	POLR1E	97	45.894	Heterocephalus_glaber_female
ENSPREG00000009470	polr1e	98	46.135	ENSHGLG00100012784	POLR1E	97	46.135	Heterocephalus_glaber_male
ENSPREG00000009470	polr1e	100	67.229	ENSHCOG00000002774	polr1e	100	67.229	Hippocampus_comes
ENSPREG00000009470	polr1e	99	53.865	ENSIPUG00000003019	polr1e	99	53.865	Ictalurus_punctatus
ENSPREG00000009470	polr1e	99	44.203	ENSSTOG00000009810	POLR1E	99	44.203	Ictidomys_tridecemlineatus
ENSPREG00000009470	polr1e	98	44.175	ENSJJAG00000020731	Polr1e	93	44.175	Jaculus_jaculus
ENSPREG00000009470	polr1e	100	78.125	ENSKMAG00000000046	polr1e	100	78.125	Kryptolebias_marmoratus
ENSPREG00000009470	polr1e	99	72.771	ENSLBEG00000003104	polr1e	99	72.771	Labrus_bergylta
ENSPREG00000009470	polr1e	86	50.964	ENSLACG00000003416	POLR1E	99	50.964	Latimeria_chalumnae
ENSPREG00000009470	polr1e	99	51.799	ENSLOCG00000012859	polr1e	99	51.799	Lepisosteus_oculatus
ENSPREG00000009470	polr1e	99	43.885	ENSLAFG00000012831	POLR1E	98	44.125	Loxodonta_africana
ENSPREG00000009470	polr1e	98	43.382	ENSMFAG00000045465	POLR1E	91	48.333	Macaca_fascicularis
ENSPREG00000009470	polr1e	90	48.333	ENSMMUG00000017892	POLR1E	91	48.333	Macaca_mulatta
ENSPREG00000009470	polr1e	94	40.199	ENSMNEG00000040283	POLR1E	96	40.090	Macaca_nemestrina
ENSPREG00000009470	polr1e	90	48.333	ENSMLEG00000031135	POLR1E	91	48.333	Mandrillus_leucophaeus
ENSPREG00000009470	polr1e	99	73.735	ENSMAMG00000001260	polr1e	99	73.735	Mastacembelus_armatus
ENSPREG00000009470	polr1e	100	72.837	ENSMZEG00005021536	polr1e	99	72.837	Maylandia_zebra
ENSPREG00000009470	polr1e	98	42.892	ENSMAUG00000021044	Polr1e	93	42.892	Mesocricetus_auratus
ENSPREG00000009470	polr1e	99	44.203	ENSMICG00000003673	POLR1E	98	44.203	Microcebus_murinus
ENSPREG00000009470	polr1e	98	41.320	ENSMOCG00000012920	Polr1e	94	41.320	Microtus_ochrogaster
ENSPREG00000009470	polr1e	100	71.942	ENSMMOG00000007391	polr1e	100	71.942	Mola_mola
ENSPREG00000009470	polr1e	96	44.527	ENSMODG00000002884	POLR1E	98	44.527	Monodelphis_domestica
ENSPREG00000009470	polr1e	100	74.760	ENSMALG00000002665	polr1e	99	74.760	Monopterus_albus
ENSPREG00000009470	polr1e	99	42.271	MGP_CAROLIEiJ_G0025967	Polr1e	97	42.677	Mus_caroli
ENSPREG00000009470	polr1e	99	42.410	ENSMUSG00000028318	Polr1e	97	42.821	Mus_musculus
ENSPREG00000009470	polr1e	99	43.405	MGP_PahariEiJ_G0024114	Polr1e	97	43.750	Mus_pahari
ENSPREG00000009470	polr1e	99	42.410	MGP_SPRETEiJ_G0026930	Polr1e	97	42.714	Mus_spretus
ENSPREG00000009470	polr1e	99	39.871	ENSMPUG00000006040	POLR1E	98	37.634	Mustela_putorius_furo
ENSPREG00000009470	polr1e	99	45.894	ENSMLUG00000012688	POLR1E	95	45.894	Myotis_lucifugus
ENSPREG00000009470	polr1e	98	45.098	ENSNGAG00000002520	Polr1e	93	45.098	Nannospalax_galili
ENSPREG00000009470	polr1e	100	73.317	ENSNBRG00000016822	polr1e	99	73.317	Neolamprologus_brichardi
ENSPREG00000009470	polr1e	95	43.434	ENSNLEG00000003616	POLR1E	91	47.500	Nomascus_leucogenys
ENSPREG00000009470	polr1e	73	48.889	ENSMEUG00000015372	-	80	48.889	Notamacropus_eugenii
ENSPREG00000009470	polr1e	86	38.251	ENSOPRG00000014206	POLR1E	99	38.251	Ochotona_princeps
ENSPREG00000009470	polr1e	98	46.569	ENSODEG00000014565	POLR1E	94	46.569	Octodon_degus
ENSPREG00000009470	polr1e	100	73.558	ENSONIG00000008921	polr1e	99	73.558	Oreochromis_niloticus
ENSPREG00000009470	polr1e	99	42.926	ENSOCUG00000024773	POLR1E	98	43.405	Oryctolagus_cuniculus
ENSPREG00000009470	polr1e	100	70.913	ENSORLG00000005143	polr1e	100	70.913	Oryzias_latipes
ENSPREG00000009470	polr1e	93	68.394	ENSORLG00020007271	polr1e	99	68.394	Oryzias_latipes_hni
ENSPREG00000009470	polr1e	100	70.913	ENSORLG00015000137	polr1e	100	70.913	Oryzias_latipes_hsok
ENSPREG00000009470	polr1e	100	68.750	ENSOMEG00000013264	polr1e	98	68.750	Oryzias_melastigma
ENSPREG00000009470	polr1e	99	43.720	ENSOGAG00000012981	POLR1E	96	43.720	Otolemur_garnettii
ENSPREG00000009470	polr1e	98	46.078	ENSOARG00000011465	POLR1E	93	46.078	Ovis_aries
ENSPREG00000009470	polr1e	95	43.325	ENSPPAG00000034566	POLR1E	91	47.500	Pan_paniscus
ENSPREG00000009470	polr1e	99	44.096	ENSPPRG00000005649	POLR1E	98	44.096	Panthera_pardus
ENSPREG00000009470	polr1e	99	44.096	ENSPTIG00000009774	POLR1E	98	44.096	Panthera_tigris_altaica
ENSPREG00000009470	polr1e	95	43.325	ENSPTRG00000020944	POLR1E	91	47.500	Pan_troglodytes
ENSPREG00000009470	polr1e	90	48.333	ENSPANG00000025563	POLR1E	91	48.333	Papio_anubis
ENSPREG00000009470	polr1e	99	57.583	ENSPKIG00000003562	polr1e	99	57.583	Paramormyrops_kingsleyae
ENSPREG00000009470	polr1e	98	44.254	ENSPSIG00000003274	POLR1E	95	44.254	Pelodiscus_sinensis
ENSPREG00000009470	polr1e	95	62.437	ENSPMGG00000024169	polr1e	95	62.437	Periophthalmus_magnuspinnatus
ENSPREG00000009470	polr1e	99	35.766	ENSPEMG00000022300	-	94	35.766	Peromyscus_maniculatus_bairdii
ENSPREG00000009470	polr1e	99	42.029	ENSPEMG00000019151	-	95	42.029	Peromyscus_maniculatus_bairdii
ENSPREG00000009470	polr1e	96	46.020	ENSPCIG00000014798	POLR1E	98	46.020	Phascolarctos_cinereus
ENSPREG00000009470	polr1e	100	89.342	ENSPFOG00000019627	polr1e	99	89.342	Poecilia_formosa
ENSPREG00000009470	polr1e	100	94.699	ENSPLAG00000022679	polr1e	100	94.699	Poecilia_latipinna
ENSPREG00000009470	polr1e	87	96.379	ENSPMEG00000022123	polr1e	93	96.379	Poecilia_mexicana
ENSPREG00000009470	polr1e	94	44.529	ENSPPYG00000019061	POLR1E	93	44.529	Pongo_abelii
ENSPREG00000009470	polr1e	57	37.917	ENSPCAG00000004891	POLR1E	77	37.917	Procavia_capensis
ENSPREG00000009470	polr1e	99	43.720	ENSPCOG00000027448	POLR1E	98	43.720	Propithecus_coquereli
ENSPREG00000009470	polr1e	96	43.890	ENSPVAG00000007940	POLR1E	83	44.192	Pteropus_vampyrus
ENSPREG00000009470	polr1e	100	72.596	ENSPNYG00000001032	polr1e	99	72.596	Pundamilia_nyererei
ENSPREG00000009470	polr1e	99	54.699	ENSPNAG00000006987	polr1e	99	54.699	Pygocentrus_nattereri
ENSPREG00000009470	polr1e	98	42.402	ENSRNOG00000012664	Polr1e	93	42.402	Rattus_norvegicus
ENSPREG00000009470	polr1e	95	43.829	ENSRBIG00000034214	POLR1E	95	45.628	Rhinopithecus_bieti
ENSPREG00000009470	polr1e	94	44.529	ENSRROG00000031986	POLR1E	91	48.333	Rhinopithecus_roxellana
ENSPREG00000009470	polr1e	98	43.627	ENSSBOG00000021415	POLR1E	97	43.627	Saimiri_boliviensis_boliviensis
ENSPREG00000009470	polr1e	83	44.058	ENSSHAG00000016084	POLR1E	95	44.058	Sarcophilus_harrisii
ENSPREG00000009470	polr1e	99	59.233	ENSSFOG00015002293	polr1e	99	59.233	Scleropages_formosus
ENSPREG00000009470	polr1e	99	73.188	ENSSMAG00000011672	polr1e	93	73.188	Scophthalmus_maximus
ENSPREG00000009470	polr1e	100	72.837	ENSSDUG00000022279	polr1e	99	72.837	Seriola_dumerili
ENSPREG00000009470	polr1e	100	73.077	ENSSLDG00000024918	polr1e	99	73.077	Seriola_lalandi_dorsalis
ENSPREG00000009470	polr1e	56	37.500	ENSSARG00000009810	-	58	38.362	Sorex_araneus
ENSPREG00000009470	polr1e	100	44.762	ENSSPUG00000009499	POLR1E	100	44.762	Sphenodon_punctatus
ENSPREG00000009470	polr1e	100	75.181	ENSSPAG00000021240	polr1e	100	75.181	Stegastes_partitus
ENSPREG00000009470	polr1e	99	44.203	ENSSSCG00000005347	POLR1E	98	44.203	Sus_scrofa
ENSPREG00000009470	polr1e	95	37.500	ENSTGUG00000007169	POLR1E	100	37.500	Taeniopygia_guttata
ENSPREG00000009470	polr1e	99	66.507	ENSTRUG00000020779	polr1e	99	66.842	Takifugu_rubripes
ENSPREG00000009470	polr1e	99	68.269	ENSTNIG00000017812	polr1e	99	68.269	Tetraodon_nigroviridis
ENSPREG00000009470	polr1e	95	44.584	ENSTBEG00000013786	POLR1E	84	44.584	Tupaia_belangeri
ENSPREG00000009470	polr1e	95	44.612	ENSTTRG00000008294	POLR1E	84	44.612	Tursiops_truncatus
ENSPREG00000009470	polr1e	99	44.203	ENSUAMG00000012474	POLR1E	98	46.240	Ursus_americanus
ENSPREG00000009470	polr1e	99	44.203	ENSUMAG00000011496	POLR1E	98	44.203	Ursus_maritimus
ENSPREG00000009470	polr1e	86	40.443	ENSVPAG00000009048	POLR1E	83	40.443	Vicugna_pacos
ENSPREG00000009470	polr1e	98	43.873	ENSVVUG00000019954	POLR1E	97	43.873	Vulpes_vulpes
ENSPREG00000009470	polr1e	99	42.381	ENSXETG00000006533	polr1e	99	42.381	Xenopus_tropicalis
ENSPREG00000009470	polr1e	100	86.779	ENSXCOG00000013706	polr1e	100	86.779	Xiphophorus_couchianus
ENSPREG00000009470	polr1e	100	93.976	ENSXMAG00000012484	polr1e	100	93.976	Xiphophorus_maculatus