EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000009591 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 9050 bases
Position: chrLG2:33559553-33568602
Accession: 103461659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014227	ResIII	PF04851.15	1.1e-06	1	1
ENSPREP00000014201	ResIII	PF04851.15	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014346	SMARCAL1-201	1812	-	ENSPREP00000014201	603 (aa)	-	-
ENSPRET00000014372	SMARCAL1-202	1647	XM_008403949	ENSPREP00000014227	548 (aa)	XP_008402171	-

Gene Model

Click here to download ENSPREG00000009591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009591	SMARCAL1	78	68.981	ENSG00000138375	SMARCAL1	99	63.750	Homo_sapiens
ENSPREG00000009591	SMARCAL1	97	87.037	ENSAPOG00000020156	SMARCAL1	60	87.037	Acanthochromis_polyacanthus
ENSPREG00000009591	SMARCAL1	93	87.385	ENSACIG00000001500	smarcal1	67	87.385	Amphilophus_citrinellus
ENSPREG00000009591	SMARCAL1	97	85.648	ENSAOCG00000014266	SMARCAL1	61	85.648	Amphiprion_ocellaris
ENSPREG00000009591	SMARCAL1	97	86.111	ENSAPEG00000015861	SMARCAL1	64	88.506	Amphiprion_percula
ENSPREG00000009591	SMARCAL1	97	86.574	ENSATEG00000020624	SMARCAL1	60	86.574	Anabas_testudineus
ENSPREG00000009591	SMARCAL1	78	69.374	ENSACAG00000004612	SMARCAL1	51	63.294	Anolis_carolinensis
ENSPREG00000009591	SMARCAL1	97	86.111	ENSACLG00000015990	SMARCAL1	60	86.111	Astatotilapia_calliptera
ENSPREG00000009591	SMARCAL1	78	79.861	ENSAMXG00000003350	smarcal1	53	74.576	Astyanax_mexicanus
ENSPREG00000009591	SMARCAL1	78	69.444	ENSCPBG00000013599	SMARCAL1	56	63.273	Chrysemys_picta_bellii
ENSPREG00000009591	SMARCAL1	76	53.991	ENSCING00000009308	-	68	53.991	Ciona_intestinalis
ENSPREG00000009591	SMARCAL1	86	83.063	ENSCSEG00000010785	SMARCAL1	61	83.063	Cynoglossus_semilaevis
ENSPREG00000009591	SMARCAL1	97	89.815	ENSCVAG00000018780	SMARCAL1	67	82.869	Cyprinodon_variegatus
ENSPREG00000009591	SMARCAL1	97	87.963	ENSFHEG00000008380	SMARCAL1	67	81.076	Fundulus_heteroclitus
ENSPREG00000009591	SMARCAL1	55	77.705	ENSGMOG00000010034	smarcal1	62	77.705	Gadus_morhua
ENSPREG00000009591	SMARCAL1	85	85.337	ENSGACG00000006073	SMARCAL1	80	85.545	Gasterosteus_aculeatus
ENSPREG00000009591	SMARCAL1	97	85.880	ENSHBUG00000002973	smarcal1	60	85.880	Haplochromis_burtoni
ENSPREG00000009591	SMARCAL1	93	82.870	ENSHCOG00000017921	smarcal1	59	82.870	Hippocampus_comes
ENSPREG00000009591	SMARCAL1	97	85.880	ENSKMAG00000012023	SMARCAL1	63	85.880	Kryptolebias_marmoratus
ENSPREG00000009591	SMARCAL1	94	86.341	ENSLBEG00000003493	smarcal1	65	86.341	Labrus_bergylta
ENSPREG00000009591	SMARCAL1	85	85.912	ENSLBEG00000022915	smarcal1	61	85.912	Labrus_bergylta
ENSPREG00000009591	SMARCAL1	78	63.510	ENSLACG00000010974	SMARCAL1	52	57.485	Latimeria_chalumnae
ENSPREG00000009591	SMARCAL1	90	77.367	ENSLOCG00000009637	smarcal1	51	77.367	Lepisosteus_oculatus
ENSPREG00000009591	SMARCAL1	99	85.648	ENSMAMG00000000828	SMARCAL1	64	85.648	Mastacembelus_armatus
ENSPREG00000009591	SMARCAL1	97	86.111	ENSMZEG00005007660	SMARCAL1	60	86.111	Maylandia_zebra
ENSPREG00000009591	SMARCAL1	99	68.981	ENSMGAG00000011658	SMARCAL1	62	68.981	Meleagris_gallopavo
ENSPREG00000009591	SMARCAL1	88	81.755	ENSMMOG00000003842	smarcal1	60	81.755	Mola_mola
ENSPREG00000009591	SMARCAL1	88	68.213	ENSMODG00000015544	SMARCAL1	54	64.240	Monodelphis_domestica
ENSPREG00000009591	SMARCAL1	88	85.681	ENSNBRG00000016273	smarcal1	63	85.681	Neolamprologus_brichardi
ENSPREG00000009591	SMARCAL1	79	68.046	ENSMEUG00000004395	SMARCAL1	50	68.046	Notamacropus_eugenii
ENSPREG00000009591	SMARCAL1	97	86.574	ENSONIG00000009036	smarcal1	64	86.574	Oreochromis_niloticus
ENSPREG00000009591	SMARCAL1	95	86.343	ENSORLG00000016455	SMARCAL1	60	86.343	Oryzias_latipes
ENSPREG00000009591	SMARCAL1	95	86.111	ENSORLG00020001610	SMARCAL1	60	86.111	Oryzias_latipes_hni
ENSPREG00000009591	SMARCAL1	95	86.343	ENSORLG00015001865	SMARCAL1	60	86.343	Oryzias_latipes_hsok
ENSPREG00000009591	SMARCAL1	99	86.499	ENSOMEG00000001845	smarcal1	62	87.879	Oryzias_melastigma
ENSPREG00000009591	SMARCAL1	90	82.639	ENSPMGG00000019092	SMARCAL1	57	82.639	Periophthalmus_magnuspinnatus
ENSPREG00000009591	SMARCAL1	97	96.092	ENSPFOG00000000560	SMARCAL1	68	90.476	Poecilia_formosa
ENSPREG00000009591	SMARCAL1	97	96.092	ENSPMEG00000018146	SMARCAL1	68	90.476	Poecilia_mexicana
ENSPREG00000009591	SMARCAL1	78	80.556	ENSPNAG00000014900	smarcal1	62	72.167	Pygocentrus_nattereri
ENSPREG00000009591	SMARCAL1	89	69.302	ENSSHAG00000013538	SMARCAL1	63	60.700	Sarcophilus_harrisii
ENSPREG00000009591	SMARCAL1	97	84.722	ENSSMAG00000010427	SMARCAL1	60	84.722	Scophthalmus_maximus
ENSPREG00000009591	SMARCAL1	98	85.880	ENSSDUG00000017470	SMARCAL1	59	85.880	Seriola_dumerili
ENSPREG00000009591	SMARCAL1	97	85.417	ENSSLDG00000007224	SMARCAL1	60	85.417	Seriola_lalandi_dorsalis
ENSPREG00000009591	SMARCAL1	78	71.296	ENSSPUG00000015369	SMARCAL1	50	64.471	Sphenodon_punctatus
ENSPREG00000009591	SMARCAL1	88	86.207	ENSSPAG00000003742	smarcal1	63	86.207	Stegastes_partitus
ENSPREG00000009591	SMARCAL1	78	64.569	ENSSSCG00000035501	SMARCAL1	50	61.472	Sus_scrofa
ENSPREG00000009591	SMARCAL1	78	68.765	ENSTGUG00000005079	SMARCAL1	70	64.592	Taeniopygia_guttata
ENSPREG00000009591	SMARCAL1	84	84.634	ENSTRUG00000010701	SMARCAL1	59	84.634	Takifugu_rubripes