EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009639 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5961 bases
Position: chrLG11:28204890-28210850
Accession: 103473063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014225	RRM_1	PF00076.22	3.5e-32	1	2
ENSPREP00000014225	RRM_1	PF00076.22	3.5e-32	2	2
ENSPREP00000014282	RRM_1	PF00076.22	3.8e-32	1	2
ENSPREP00000014282	RRM_1	PF00076.22	3.8e-32	2	2
ENSPREP00000014307	RRM_1	PF00076.22	9.2e-31	1	2
ENSPREP00000014307	RRM_1	PF00076.22	9.2e-31	2	2
ENSPREP00000014325	RRM_1	PF00076.22	9.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014451	-	1044	XM_008422997	ENSPREP00000014307	347 (aa)	XP_008421219	-
ENSPRET00000014427	-	1059	-	ENSPREP00000014282	352 (aa)	-	-
ENSPRET00000014370	-	1023	-	ENSPREP00000014225	340 (aa)	-	-
ENSPRET00000014470	-	822	-	ENSPREP00000014325	273 (aa)	-	-

Gene Model

Click here to download ENSPREG00000009639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009639	srsf4	54	40.796	ENSPREG00000013165	srsf9	77	40.777
ENSPREG00000009639	srsf4	62	37.168	ENSPREG00000016792	-	67	46.154
ENSPREG00000009639	srsf4	56	40.394	ENSPREG00000009667	srsf1a	68	46.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009639	srsf4	76	65.950	ENSG00000116350	SRSF4	76	70.588	Homo_sapiens
ENSPREG00000009639	srsf4	83	95.652	ENSAPOG00000020244	srsf4	78	98.507	Acanthochromis_polyacanthus
ENSPREG00000009639	srsf4	50	78.090	ENSAPOG00000023399	-	60	78.090	Acanthochromis_polyacanthus
ENSPREG00000009639	srsf4	81	95.652	ENSACIG00000018649	srsf4	93	95.588	Amphilophus_citrinellus
ENSPREG00000009639	srsf4	69	92.647	ENSATEG00000005680	srsf4	60	93.407	Anabas_testudineus
ENSPREG00000009639	srsf4	84	95.652	ENSACLG00000003395	srsf4	98	95.588	Astatotilapia_calliptera
ENSPREG00000009639	srsf4	50	76.374	ENSACLG00000021269	-	51	78.142	Astatotilapia_calliptera
ENSPREG00000009639	srsf4	69	86.957	ENSAMXG00000034811	srsf4	81	89.157	Astyanax_mexicanus
ENSPREG00000009639	srsf4	62	43.673	WBGene00004698	rsp-1	97	52.414	Caenorhabditis_elegans
ENSPREG00000009639	srsf4	50	59.585	ENSCING00000020631	-	80	61.538	Ciona_intestinalis
ENSPREG00000009639	srsf4	96	42.222	ENSCING00000024718	-	56	58.247	Ciona_intestinalis
ENSPREG00000009639	srsf4	67	92.754	ENSCSEG00000010058	srsf4	81	95.588	Cynoglossus_semilaevis
ENSPREG00000009639	srsf4	85	61.382	ENSCVAG00000004342	srsf4	85	65.060	Cyprinodon_variegatus
ENSPREG00000009639	srsf4	51	87.363	ENSDARG00000105293	srsf4	79	89.286	Danio_rerio
ENSPREG00000009639	srsf4	57	56.250	ENSEBUG00000001681	srsf4	67	61.111	Eptatretus_burgeri
ENSPREG00000009639	srsf4	89	47.188	ENSEBUG00000005588	srsf4	87	47.181	Eptatretus_burgeri
ENSPREG00000009639	srsf4	86	59.639	ENSELUG00000017551	srsf4	95	75.940	Esox_lucius
ENSPREG00000009639	srsf4	85	95.652	ENSFHEG00000007472	srsf4	90	98.810	Fundulus_heteroclitus
ENSPREG00000009639	srsf4	50	89.326	ENSGMOG00000012906	srsf4	57	90.556	Gadus_morhua
ENSPREG00000009639	srsf4	92	95.652	ENSGAFG00000018496	srsf4	94	90.937	Gambusia_affinis
ENSPREG00000009639	srsf4	51	93.333	ENSGACG00000002389	srsf4	56	93.333	Gasterosteus_aculeatus
ENSPREG00000009639	srsf4	50	76.374	ENSHBUG00000011326	-	51	76.923	Haplochromis_burtoni
ENSPREG00000009639	srsf4	83	94.203	ENSHCOG00000012540	srsf4	68	91.398	Hippocampus_comes
ENSPREG00000009639	srsf4	98	92.754	ENSKMAG00000013631	srsf4	81	95.522	Kryptolebias_marmoratus
ENSPREG00000009639	srsf4	81	95.652	ENSMAMG00000004888	srsf4	93	94.118	Mastacembelus_armatus
ENSPREG00000009639	srsf4	84	95.652	ENSMZEG00005026275	srsf4	98	71.429	Maylandia_zebra
ENSPREG00000009639	srsf4	81	95.652	ENSMMOG00000013653	srsf4	97	95.588	Mola_mola
ENSPREG00000009639	srsf4	50	88.136	ENSMODG00000011052	SRSF4	56	87.709	Monodelphis_domestica
ENSPREG00000009639	srsf4	95	95.652	ENSMALG00000013392	srsf4	94	95.588	Monopterus_albus
ENSPREG00000009639	srsf4	54	51.362	ENSNBRG00000014848	srsf4	84	65.217	Neolamprologus_brichardi
ENSPREG00000009639	srsf4	50	71.910	ENSNLEG00000030787	-	62	73.143	Nomascus_leucogenys
ENSPREG00000009639	srsf4	50	87.571	ENSODEG00000003230	SRSF4	50	69.076	Octodon_degus
ENSPREG00000009639	srsf4	50	91.620	ENSONIG00000013730	srsf4	77	98.507	Oreochromis_niloticus
ENSPREG00000009639	srsf4	55	71.569	ENSORLG00000009430	-	87	69.820	Oryzias_latipes
ENSPREG00000009639	srsf4	67	100.000	ENSORLG00020016052	srsf4	73	98.507	Oryzias_latipes_hni
ENSPREG00000009639	srsf4	94	95.652	ENSORLG00015007566	srsf4	93	95.588	Oryzias_latipes_hsok
ENSPREG00000009639	srsf4	85	95.652	ENSOMEG00000005541	srsf4	72	98.507	Oryzias_melastigma
ENSPREG00000009639	srsf4	61	92.754	ENSPMGG00000013436	srsf4	90	94.118	Periophthalmus_magnuspinnatus
ENSPREG00000009639	srsf4	92	95.652	ENSPFOG00000001306	srsf4	84	98.507	Poecilia_formosa
ENSPREG00000009639	srsf4	100	95.170	ENSPLAG00000008812	srsf4	100	95.170	Poecilia_latipinna
ENSPREG00000009639	srsf4	92	95.652	ENSPMEG00000023638	srsf4	91	95.652	Poecilia_mexicana
ENSPREG00000009639	srsf4	74	72.830	ENSPNYG00000003796	srsf4	74	98.507	Pundamilia_nyererei
ENSPREG00000009639	srsf4	50	91.429	ENSSFOG00015020292	srsf4	82	92.035	Scleropages_formosus
ENSPREG00000009639	srsf4	51	92.473	ENSSMAG00000001707	srsf4	99	65.659	Scophthalmus_maximus
ENSPREG00000009639	srsf4	98	95.652	ENSSDUG00000007387	srsf4	72	98.507	Seriola_dumerili
ENSPREG00000009639	srsf4	50	81.287	ENSSLDG00000009745	srsf4	98	61.852	Seriola_lalandi_dorsalis
ENSPREG00000009639	srsf4	95	95.652	ENSSPAG00000014538	srsf4	83	95.833	Stegastes_partitus
ENSPREG00000009639	srsf4	82	69.677	ENSTRUG00000011891	srsf4	79	97.015	Takifugu_rubripes
ENSPREG00000009639	srsf4	94	95.652	ENSXCOG00000018826	srsf4	99	93.075	Xiphophorus_couchianus
ENSPREG00000009639	srsf4	84	75.362	ENSXCOG00000003212	-	54	77.612	Xiphophorus_couchianus
ENSPREG00000009639	srsf4	77	91.760	ENSXMAG00000005545	srsf4	98	88.302	Xiphophorus_maculatus