EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009702 (Gene tree)
Gene ID: 103479660
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 4673 bases
Position: chrLG17:21975384-21980056
Accession: 103479660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014295	zf-RanBP	PF00641.18	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014440	-	1311	XM_008434209	ENSPREP00000014295	436 (aa)	XP_008432431	UPI0004A3379C

Gene Model

Click here to download ENSPREG00000009702's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04217	Necroptosis	KEGG
pret04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009702	sharpin	95	53.349	ENSPREG00000014689	shrprbck1r	59	53.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009702	sharpin	99	52.878	ENSAPOG00000022737	shrprbck1r	65	52.878	Acanthochromis_polyacanthus
ENSPREG00000009702	sharpin	100	83.105	ENSAPOG00000023352	sharpin	100	83.105	Acanthochromis_polyacanthus
ENSPREG00000009702	sharpin	95	55.452	ENSACIG00000002184	shrprbck1r	97	51.163	Amphilophus_citrinellus
ENSPREG00000009702	sharpin	100	83.790	ENSAOCG00000017464	sharpin	100	83.790	Amphiprion_ocellaris
ENSPREG00000009702	sharpin	99	53.205	ENSAOCG00000002890	shrprbck1r	65	53.205	Amphiprion_ocellaris
ENSPREG00000009702	sharpin	99	51.812	ENSAPEG00000023274	shrprbck1r	64	51.812	Amphiprion_percula
ENSPREG00000009702	sharpin	100	83.790	ENSAPEG00000004049	sharpin	100	83.790	Amphiprion_percula
ENSPREG00000009702	sharpin	95	53.596	ENSATEG00000014561	shrprbck1r	59	54.439	Anabas_testudineus
ENSPREG00000009702	sharpin	96	80.285	ENSATEG00000007832	sharpin	88	80.285	Anabas_testudineus
ENSPREG00000009702	sharpin	95	55.220	ENSACLG00000022609	shrprbck1r	59	55.916	Astatotilapia_calliptera
ENSPREG00000009702	sharpin	62	93.939	ENSACLG00000020160	-	86	93.939	Astatotilapia_calliptera
ENSPREG00000009702	sharpin	95	56.136	ENSAMXG00000021016	shrprbck1r	66	56.591	Astyanax_mexicanus
ENSPREG00000009702	sharpin	87	53.944	ENSAMXG00000006229	sharpin	96	53.944	Astyanax_mexicanus
ENSPREG00000009702	sharpin	95	50.465	ENSCSEG00000011306	shrprbck1r	59	50.465	Cynoglossus_semilaevis
ENSPREG00000009702	sharpin	100	92.431	ENSCVAG00000006586	sharpin	100	92.431	Cyprinodon_variegatus
ENSPREG00000009702	sharpin	95	54.801	ENSCVAG00000007250	shrprbck1r	59	54.801	Cyprinodon_variegatus
ENSPREG00000009702	sharpin	98	54.274	ENSDARG00000059871	shrprbck1r	97	54.060	Danio_rerio
ENSPREG00000009702	sharpin	91	54.034	ENSDARG00000076995	sharpin	98	54.034	Danio_rerio
ENSPREG00000009702	sharpin	95	57.452	ENSELUG00000016022	shrprbck1r	59	57.452	Esox_lucius
ENSPREG00000009702	sharpin	100	93.807	ENSFHEG00000013564	sharpin	99	93.807	Fundulus_heteroclitus
ENSPREG00000009702	sharpin	83	75.926	ENSGMOG00000010123	sharpin	95	75.926	Gadus_morhua
ENSPREG00000009702	sharpin	95	52.064	ENSGAFG00000009309	shrprbck1r	59	52.064	Gambusia_affinis
ENSPREG00000009702	sharpin	96	67.381	ENSGAFG00000021405	sharpin	97	67.381	Gambusia_affinis
ENSPREG00000009702	sharpin	95	56.148	ENSHBUG00000021933	shrprbck1r	59	56.148	Haplochromis_burtoni
ENSPREG00000009702	sharpin	96	67.689	ENSHCOG00000018847	sharpin	81	66.897	Hippocampus_comes
ENSPREG00000009702	sharpin	88	56.923	ENSIPUG00000014247	shrprbck1r	54	56.923	Ictalurus_punctatus
ENSPREG00000009702	sharpin	87	54.359	ENSIPUG00000011951	sharpin	99	54.359	Ictalurus_punctatus
ENSPREG00000009702	sharpin	96	78.472	ENSKMAG00000015204	sharpin	77	78.472	Kryptolebias_marmoratus
ENSPREG00000009702	sharpin	95	53.440	ENSKMAG00000015215	shrprbck1r	60	52.584	Kryptolebias_marmoratus
ENSPREG00000009702	sharpin	100	81.236	ENSLBEG00000016624	sharpin	99	81.236	Labrus_bergylta
ENSPREG00000009702	sharpin	99	51.695	ENSLBEG00000016876	shrprbck1r	65	52.137	Labrus_bergylta
ENSPREG00000009702	sharpin	90	46.040	ENSLACG00000010948	-	58	46.040	Latimeria_chalumnae
ENSPREG00000009702	sharpin	94	59.479	ENSLOCG00000008910	shrprbck1r	59	59.906	Lepisosteus_oculatus
ENSPREG00000009702	sharpin	81	93.103	ENSMAMG00000014645	sharpin	94	93.103	Mastacembelus_armatus
ENSPREG00000009702	sharpin	99	50.630	ENSMAMG00000022930	shrprbck1r	65	51.681	Mastacembelus_armatus
ENSPREG00000009702	sharpin	95	55.220	ENSMZEG00005021257	shrprbck1r	59	55.916	Maylandia_zebra
ENSPREG00000009702	sharpin	95	52.995	ENSMMOG00000003764	shrprbck1r	59	52.822	Mola_mola
ENSPREG00000009702	sharpin	77	82.955	ENSMMOG00000016788	sharpin	92	82.955	Mola_mola
ENSPREG00000009702	sharpin	81	93.103	ENSMALG00000020528	sharpin	95	93.103	Monopterus_albus
ENSPREG00000009702	sharpin	88	56.818	ENSMALG00000008861	shrprbck1r	55	56.818	Monopterus_albus
ENSPREG00000009702	sharpin	76	60.542	ENSNBRG00000012382	sharpin	94	60.542	Neolamprologus_brichardi
ENSPREG00000009702	sharpin	95	54.756	ENSNBRG00000002270	shrprbck1r	59	55.452	Neolamprologus_brichardi
ENSPREG00000009702	sharpin	90	68.370	ENSONIG00000009626	-	99	68.370	Oreochromis_niloticus
ENSPREG00000009702	sharpin	95	55.116	ENSONIG00000014401	shrprbck1r	59	55.814	Oreochromis_niloticus
ENSPREG00000009702	sharpin	100	77.626	ENSORLG00000017281	sharpin	100	77.626	Oryzias_latipes
ENSPREG00000009702	sharpin	95	53.881	ENSORLG00000007392	shrprbck1r	59	53.881	Oryzias_latipes
ENSPREG00000009702	sharpin	95	54.566	ENSORLG00020018619	shrprbck1r	59	54.566	Oryzias_latipes_hni
ENSPREG00000009702	sharpin	100	77.803	ENSORLG00020000801	sharpin	100	77.803	Oryzias_latipes_hni
ENSPREG00000009702	sharpin	95	52.644	ENSORLG00015018865	shrprbck1r	59	52.644	Oryzias_latipes_hsok
ENSPREG00000009702	sharpin	100	78.032	ENSORLG00015009860	sharpin	100	78.032	Oryzias_latipes_hsok
ENSPREG00000009702	sharpin	95	54.907	ENSOMEG00000012749	shrprbck1r	59	54.907	Oryzias_melastigma
ENSPREG00000009702	sharpin	97	54.846	ENSOMEG00000005729	sharpin	91	57.210	Oryzias_melastigma
ENSPREG00000009702	sharpin	99	57.506	ENSPKIG00000018308	-	90	57.506	Paramormyrops_kingsleyae
ENSPREG00000009702	sharpin	94	62.830	ENSPKIG00000006933	shrprbck1r	59	63.549	Paramormyrops_kingsleyae
ENSPREG00000009702	sharpin	58	86.667	ENSPMGG00000019318	sharpin	96	86.667	Periophthalmus_magnuspinnatus
ENSPREG00000009702	sharpin	99	50.545	ENSPMGG00000013254	shrprbck1r	64	50.545	Periophthalmus_magnuspinnatus
ENSPREG00000009702	sharpin	99	51.477	ENSPFOG00000004214	shrprbck1r	97	51.477	Poecilia_formosa
ENSPREG00000009702	sharpin	100	98.165	ENSPFOG00000015253	sharpin	100	98.165	Poecilia_formosa
ENSPREG00000009702	sharpin	100	98.394	ENSPLAG00000000423	sharpin	100	98.394	Poecilia_latipinna
ENSPREG00000009702	sharpin	95	53.935	ENSPLAG00000020523	shrprbck1r	59	53.935	Poecilia_latipinna
ENSPREG00000009702	sharpin	95	53.196	ENSPMEG00000006877	shrprbck1r	59	53.196	Poecilia_mexicana
ENSPREG00000009702	sharpin	81	84.685	ENSPMEG00000023030	sharpin	91	84.685	Poecilia_mexicana
ENSPREG00000009702	sharpin	95	55.220	ENSPNYG00000022601	shrprbck1r	59	55.916	Pundamilia_nyererei
ENSPREG00000009702	sharpin	87	51.538	ENSPNAG00000002911	sharpin	99	51.538	Pygocentrus_nattereri
ENSPREG00000009702	sharpin	95	56.522	ENSPNAG00000007847	shrprbck1r	60	57.208	Pygocentrus_nattereri
ENSPREG00000009702	sharpin	95	52.402	ENSSFOG00015004028	sharpin	92	52.402	Scleropages_formosus
ENSPREG00000009702	sharpin	95	53.061	ENSSMAG00000018085	shrprbck1r	60	53.515	Scophthalmus_maximus
ENSPREG00000009702	sharpin	99	51.566	ENSSDUG00000002959	shrprbck1r	65	52.599	Seriola_dumerili
ENSPREG00000009702	sharpin	95	59.856	ENSSDUG00000019039	sharpin	95	59.856	Seriola_dumerili
ENSPREG00000009702	sharpin	99	51.050	ENSSLDG00000009026	shrprbck1r	65	52.092	Seriola_lalandi_dorsalis
ENSPREG00000009702	sharpin	99	51.983	ENSSPAG00000016097	shrprbck1r	67	51.983	Stegastes_partitus
ENSPREG00000009702	sharpin	63	82.222	ENSSPAG00000021807	sharpin	92	82.222	Stegastes_partitus
ENSPREG00000009702	sharpin	95	52.093	ENSTRUG00000006949	shrprbck1r	58	52.791	Takifugu_rubripes
ENSPREG00000009702	sharpin	95	64.663	ENSTRUG00000011046	sharpin	96	64.387	Takifugu_rubripes
ENSPREG00000009702	sharpin	91	66.749	ENSTNIG00000008521	sharpin	98	66.749	Tetraodon_nigroviridis
ENSPREG00000009702	sharpin	96	65.952	ENSXCOG00000015019	sharpin	98	65.952	Xiphophorus_couchianus
ENSPREG00000009702	sharpin	95	50.801	ENSXCOG00000006701	shrprbck1r	58	50.801	Xiphophorus_couchianus
ENSPREG00000009702	sharpin	95	50.801	ENSXMAG00000018972	shrprbck1r	58	50.801	Xiphophorus_maculatus
ENSPREG00000009702	sharpin	100	97.477	ENSXMAG00000022076	sharpin	100	97.477	Xiphophorus_maculatus