EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009813 (Gene tree)
Gene ID: 103475607
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6027 bases
Position: chrLG14:4296516-4302542
Accession: 103475607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014497	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014644	-	806	XM_008427388	ENSPREP00000014497	254 (aa)	XP_008425610	UPI0004A32D2D

Gene Model

Click here to download ENSPREG00000009813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009813	rab34b	71	38.674	ENSPREG00000015480	rab6ba	84	38.674
ENSPREG00000009813	rab34b	74	31.383	ENSPREG00000022167	-	83	31.098
ENSPREG00000009813	rab34b	54	37.500	ENSPREG00000022509	rab23	70	39.456
ENSPREG00000009813	rab34b	66	38.095	ENSPREG00000017344	-	76	38.095
ENSPREG00000009813	rab34b	66	36.310	ENSPREG00000019783	RAB15	79	36.310
ENSPREG00000009813	rab34b	63	40.000	ENSPREG00000014634	rab30	77	40.000
ENSPREG00000009813	rab34b	70	34.637	ENSPREG00000010154	rab4a	83	34.637
ENSPREG00000009813	rab34b	63	36.646	ENSPREG00000020321	rab1ab	78	36.646
ENSPREG00000009813	rab34b	63	34.568	ENSPREG00000006119	rab25a	97	34.568
ENSPREG00000009813	rab34b	63	39.375	ENSPREG00000017567	rab13	79	39.375
ENSPREG00000009813	rab34b	83	32.093	ENSPREG00000005323	si:dkey-16l2.16	99	32.093
ENSPREG00000009813	rab34b	69	31.638	ENSPREG00000012148	RAB7A	85	31.638
ENSPREG00000009813	rab34b	62	34.783	ENSPREG00000006970	rab9b	72	34.783
ENSPREG00000009813	rab34b	72	30.108	ENSPREG00000017750	RAB7A	89	30.108
ENSPREG00000009813	rab34b	69	34.078	ENSPREG00000022241	si:dkey-13a21.4	86	34.078
ENSPREG00000009813	rab34b	65	35.758	ENSPREG00000014888	rab2a	76	35.758
ENSPREG00000009813	rab34b	63	40.123	ENSPREG00000017517	zgc:171927	74	40.123
ENSPREG00000009813	rab34b	62	31.677	ENSPREG00000012522	-	79	31.677
ENSPREG00000009813	rab34b	63	37.267	ENSPREG00000004889	-	76	37.267
ENSPREG00000009813	rab34b	63	30.000	ENSPREG00000010920	rab22a	81	30.000
ENSPREG00000009813	rab34b	84	63.084	ENSPREG00000008951	rab34a	87	63.084
ENSPREG00000009813	rab34b	63	39.752	ENSPREG00000009535	RAB41	75	39.752
ENSPREG00000009813	rab34b	63	33.125	ENSPREG00000010146	rab5c	71	33.125
ENSPREG00000009813	rab34b	72	37.158	ENSPREG00000007129	RAB39B	82	37.158
ENSPREG00000009813	rab34b	71	33.880	ENSPREG00000013962	rab42a	83	33.880
ENSPREG00000009813	rab34b	75	30.769	ENSPREG00000005923	rab18a	78	30.769
ENSPREG00000009813	rab34b	63	36.250	ENSPREG00000017487	rab12	64	36.250
ENSPREG00000009813	rab34b	73	38.172	ENSPREG00000021505	rab6a	85	38.172
ENSPREG00000009813	rab34b	64	41.818	ENSPREG00000007017	zgc:101559	70	41.818
ENSPREG00000009813	rab34b	80	34.762	ENSPREG00000003221	rab33a	58	34.762
ENSPREG00000009813	rab34b	63	36.025	ENSPREG00000003616	rab1ba	79	36.025
ENSPREG00000009813	rab34b	64	37.931	ENSPREG00000000880	rab33ba	73	37.931
ENSPREG00000009813	rab34b	65	38.182	ENSPREG00000009597	-	77	38.182
ENSPREG00000009813	rab34b	76	35.233	ENSPREG00000010284	rab15	85	35.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009813	rab34b	85	90.233	ENSAPOG00000019147	rab34b	95	79.000	Acanthochromis_polyacanthus
ENSPREG00000009813	rab34b	100	74.803	ENSACIG00000004859	rab34b	99	74.803	Amphilophus_citrinellus
ENSPREG00000009813	rab34b	100	85.547	ENSAOCG00000007106	rab34b	93	85.547	Amphiprion_ocellaris
ENSPREG00000009813	rab34b	92	86.752	ENSAPEG00000018607	rab34b	86	86.555	Amphiprion_percula
ENSPREG00000009813	rab34b	94	81.250	ENSATEG00000006851	rab34b	94	81.250	Anabas_testudineus
ENSPREG00000009813	rab34b	100	87.008	ENSACLG00000005733	rab34b	96	87.008	Astatotilapia_calliptera
ENSPREG00000009813	rab34b	99	71.542	ENSAMXG00000006018	rab34b	98	71.542	Astyanax_mexicanus
ENSPREG00000009813	rab34b	93	80.932	ENSCSEG00000018133	rab34b	94	80.932	Cynoglossus_semilaevis
ENSPREG00000009813	rab34b	99	73.518	ENSDARG00000010977	rab34b	98	73.518	Danio_rerio
ENSPREG00000009813	rab34b	100	80.784	ENSELUG00000005597	rab34b	99	80.784	Esox_lucius
ENSPREG00000009813	rab34b	100	92.520	ENSFHEG00000004532	rab34b	100	92.520	Fundulus_heteroclitus
ENSPREG00000009813	rab34b	81	80.676	ENSGMOG00000007140	rab34b	100	80.676	Gadus_morhua
ENSPREG00000009813	rab34b	100	84.314	ENSGACG00000020514	rab34b	99	84.314	Gasterosteus_aculeatus
ENSPREG00000009813	rab34b	99	69.960	ENSIPUG00000024531	rab34	98	69.960	Ictalurus_punctatus
ENSPREG00000009813	rab34b	100	88.976	ENSKMAG00000019341	rab34b	100	88.976	Kryptolebias_marmoratus
ENSPREG00000009813	rab34b	100	84.706	ENSLBEG00000027819	rab34b	100	84.706	Labrus_bergylta
ENSPREG00000009813	rab34b	100	85.882	ENSMAMG00000020214	rab34b	100	85.882	Mastacembelus_armatus
ENSPREG00000009813	rab34b	100	80.709	ENSMMOG00000010936	rab34b	86	80.709	Mola_mola
ENSPREG00000009813	rab34b	93	85.169	ENSMALG00000018499	rab34b	88	85.169	Monopterus_albus
ENSPREG00000009813	rab34b	100	87.008	ENSONIG00000005519	rab34b	100	87.008	Oreochromis_niloticus
ENSPREG00000009813	rab34b	100	84.252	ENSORLG00000003119	rab34b	92	84.252	Oryzias_latipes
ENSPREG00000009813	rab34b	100	85.039	ENSORLG00020016139	rab34b	92	85.039	Oryzias_latipes_hni
ENSPREG00000009813	rab34b	100	85.039	ENSORLG00015000584	rab34b	92	85.039	Oryzias_latipes_hsok
ENSPREG00000009813	rab34b	100	85.433	ENSOMEG00000010334	rab34b	98	83.951	Oryzias_melastigma
ENSPREG00000009813	rab34b	99	70.866	ENSPKIG00000013326	rab34b	98	70.866	Paramormyrops_kingsleyae
ENSPREG00000009813	rab34b	100	81.890	ENSPMGG00000021697	rab34b	99	81.890	Periophthalmus_magnuspinnatus
ENSPREG00000009813	rab34b	100	99.213	ENSPFOG00000011444	rab34b	99	99.213	Poecilia_formosa
ENSPREG00000009813	rab34b	100	99.213	ENSPLAG00000005074	rab34b	100	99.213	Poecilia_latipinna
ENSPREG00000009813	rab34b	100	99.213	ENSPMEG00000013297	rab34b	100	99.213	Poecilia_mexicana
ENSPREG00000009813	rab34b	100	75.984	ENSPNYG00000017153	rab34b	99	89.266	Pundamilia_nyererei
ENSPREG00000009813	rab34b	93	72.996	ENSPNAG00000015040	rab34b	99	72.996	Pygocentrus_nattereri
ENSPREG00000009813	rab34b	100	71.094	ENSSFOG00015005188	rab34	99	71.094	Scleropages_formosus
ENSPREG00000009813	rab34b	93	84.255	ENSSMAG00000019926	rab34b	100	81.013	Scophthalmus_maximus
ENSPREG00000009813	rab34b	100	89.020	ENSSDUG00000016760	rab34b	80	89.020	Seriola_dumerili
ENSPREG00000009813	rab34b	72	92.935	ENSSLDG00000014812	rab34b	90	92.935	Seriola_lalandi_dorsalis
ENSPREG00000009813	rab34b	100	85.039	ENSSPAG00000002801	rab34b	100	85.039	Stegastes_partitus
ENSPREG00000009813	rab34b	94	83.333	ENSTRUG00000014481	rab34b	97	83.333	Takifugu_rubripes
ENSPREG00000009813	rab34b	100	80.392	ENSTNIG00000016158	rab34b	99	80.392	Tetraodon_nigroviridis