EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000009841 (Gene tree)
Gene ID: 103471838
Gene Symbol: neil3
Alias: zgc:103553
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 12050 bases
Position: chrLG10:30275505-30287554
Accession: 103471838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014619	zf-RanBP	PF00641.18	2.2e-06	1	1
ENSPREP00000014598	zf-RanBP	PF00641.18	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014749	-	1641	XM_008421059	ENSPREP00000014598	546 (aa)	XP_008419281	-
ENSPRET00000014771	-	1623	-	ENSPREP00000014619	540 (aa)	-	-

Gene Model

Click here to download ENSPREG00000009841's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009841	neil3	100	50.247	ENSG00000109674	NEIL3	100	50.247	Homo_sapiens
ENSPREG00000009841	neil3	100	78.622	ENSACIG00000002265	neil3	100	78.622	Amphilophus_citrinellus
ENSPREG00000009841	neil3	100	79.469	ENSATEG00000004193	neil3	100	79.469	Anabas_testudineus
ENSPREG00000009841	neil3	100	45.215	ENSANAG00000026464	NEIL3	100	45.215	Aotus_nancymaae
ENSPREG00000009841	neil3	100	78.351	ENSACLG00000011270	neil3	100	78.351	Astatotilapia_calliptera
ENSPREG00000009841	neil3	100	49.346	ENSBTAG00000005825	NEIL3	100	49.346	Bos_taurus
ENSPREG00000009841	neil3	100	48.849	ENSCJAG00000005464	NEIL3	100	48.849	Callithrix_jacchus
ENSPREG00000009841	neil3	100	49.510	ENSCHIG00000009157	NEIL3	100	49.510	Capra_hircus
ENSPREG00000009841	neil3	100	49.331	ENSTSYG00000014680	NEIL3	100	49.331	Carlito_syrichta
ENSPREG00000009841	neil3	88	49.222	ENSCAPG00000006333	NEIL3	98	49.222	Cavia_aperea
ENSPREG00000009841	neil3	100	49.342	ENSCPOG00000003297	NEIL3	100	49.178	Cavia_porcellus
ENSPREG00000009841	neil3	100	49.010	ENSCCAG00000018838	NEIL3	100	49.010	Cebus_capucinus
ENSPREG00000009841	neil3	100	49.178	ENSCLAG00000015661	NEIL3	100	49.178	Chinchilla_lanigera
ENSPREG00000009841	neil3	100	49.254	ENSCSAG00000003064	NEIL3	100	49.254	Chlorocebus_sabaeus
ENSPREG00000009841	neil3	77	70.297	ENSCHOG00000008101	NEIL3	74	70.297	Choloepus_hoffmanni
ENSPREG00000009841	neil3	100	49.007	ENSCANG00000043622	NEIL3	100	49.007	Colobus_angolensis_palliatus
ENSPREG00000009841	neil3	100	74.742	ENSCSEG00000003828	neil3	99	74.742	Cynoglossus_semilaevis
ENSPREG00000009841	neil3	100	61.400	ENSDARG00000020079	neil3	100	61.400	Danio_rerio
ENSPREG00000009841	neil3	89	50.288	ENSDNOG00000012236	NEIL3	100	50.288	Dasypus_novemcinctus
ENSPREG00000009841	neil3	100	50.165	ENSEASG00005022272	NEIL3	100	50.165	Equus_asinus_asinus
ENSPREG00000009841	neil3	100	50.000	ENSECAG00000009121	NEIL3	100	50.000	Equus_caballus
ENSPREG00000009841	neil3	76	41.886	ENSEEUG00000010848	NEIL3	100	41.886	Erinaceus_europaeus
ENSPREG00000009841	neil3	100	49.495	ENSFCAG00000004956	NEIL3	100	49.495	Felis_catus
ENSPREG00000009841	neil3	100	78.694	ENSHBUG00000023848	neil3	100	78.694	Haplochromis_burtoni
ENSPREG00000009841	neil3	89	51.625	ENSHGLG00000006643	NEIL3	100	51.625	Heterocephalus_glaber_female
ENSPREG00000009841	neil3	89	51.625	ENSHGLG00100006959	NEIL3	100	51.625	Heterocephalus_glaber_male
ENSPREG00000009841	neil3	100	48.270	ENSSTOG00000016245	NEIL3	100	48.270	Ictidomys_tridecemlineatus
ENSPREG00000009841	neil3	63	49.741	ENSLACG00000000308	NEIL3	99	49.741	Latimeria_chalumnae
ENSPREG00000009841	neil3	100	49.834	ENSMFAG00000002547	NEIL3	100	49.834	Macaca_fascicularis
ENSPREG00000009841	neil3	100	50.000	ENSMMUG00000007394	NEIL3	100	50.000	Macaca_mulatta
ENSPREG00000009841	neil3	100	49.503	ENSMNEG00000036177	NEIL3	100	49.503	Macaca_nemestrina
ENSPREG00000009841	neil3	100	76.289	ENSMAMG00000017052	neil3	100	76.460	Mastacembelus_armatus
ENSPREG00000009841	neil3	100	78.351	ENSMZEG00005001680	neil3	100	78.351	Maylandia_zebra
ENSPREG00000009841	neil3	97	45.804	ENSMODG00000003813	NEIL3	99	45.893	Monodelphis_domestica
ENSPREG00000009841	neil3	100	49.180	MGP_CAROLIEiJ_G0031052	Neil3	100	49.180	Mus_caroli
ENSPREG00000009841	neil3	100	49.340	ENSMUSG00000039396	Neil3	100	49.340	Mus_musculus
ENSPREG00000009841	neil3	100	48.849	MGP_PahariEiJ_G0021518	Neil3	100	48.845	Mus_pahari
ENSPREG00000009841	neil3	100	49.670	MGP_SPRETEiJ_G0032167	Neil3	100	49.670	Mus_spretus
ENSPREG00000009841	neil3	100	79.891	ENSNBRG00000013229	neil3	100	79.891	Neolamprologus_brichardi
ENSPREG00000009841	neil3	100	49.918	ENSNLEG00000016818	NEIL3	100	49.918	Nomascus_leucogenys
ENSPREG00000009841	neil3	100	49.178	ENSODEG00000004102	NEIL3	100	49.178	Octodon_degus
ENSPREG00000009841	neil3	100	79.381	ENSONIG00000001176	neil3	100	79.381	Oreochromis_niloticus
ENSPREG00000009841	neil3	99	49.667	ENSOCUG00000001040	NEIL3	99	49.667	Oryctolagus_cuniculus
ENSPREG00000009841	neil3	100	72.852	ENSOMEG00000014798	neil3	100	72.852	Oryzias_melastigma
ENSPREG00000009841	neil3	100	49.180	ENSOGAG00000012624	NEIL3	100	49.180	Otolemur_garnettii
ENSPREG00000009841	neil3	94	50.364	ENSOARG00000006852	NEIL3	99	50.364	Ovis_aries
ENSPREG00000009841	neil3	100	50.328	ENSPPAG00000035318	NEIL3	100	50.164	Pan_paniscus
ENSPREG00000009841	neil3	100	49.663	ENSPPRG00000003958	NEIL3	100	49.663	Panthera_pardus
ENSPREG00000009841	neil3	100	50.000	ENSPTIG00000012966	NEIL3	100	50.000	Panthera_tigris_altaica
ENSPREG00000009841	neil3	100	49.670	ENSPTRG00000016617	NEIL3	100	49.670	Pan_troglodytes
ENSPREG00000009841	neil3	100	49.003	ENSPANG00000014727	NEIL3	100	49.003	Papio_anubis
ENSPREG00000009841	neil3	100	92.374	ENSPFOG00000018858	neil3	100	92.374	Poecilia_formosa
ENSPREG00000009841	neil3	100	92.201	ENSPLAG00000010685	neil3	100	92.201	Poecilia_latipinna
ENSPREG00000009841	neil3	100	92.028	ENSPMEG00000013971	neil3	100	92.028	Poecilia_mexicana
ENSPREG00000009841	neil3	72	69.307	ENSPCAG00000006386	NEIL3	77	69.307	Procavia_capensis
ENSPREG00000009841	neil3	100	61.864	ENSPCOG00000010888	NEIL3	100	61.864	Propithecus_coquereli
ENSPREG00000009841	neil3	99	49.585	ENSPVAG00000002255	NEIL3	99	49.585	Pteropus_vampyrus
ENSPREG00000009841	neil3	100	79.329	ENSPNYG00000021276	neil3	100	79.329	Pundamilia_nyererei
ENSPREG00000009841	neil3	98	55.083	ENSPNAG00000019983	neil3	100	55.596	Pygocentrus_nattereri
ENSPREG00000009841	neil3	100	49.344	ENSRNOG00000011688	Neil3	100	49.344	Rattus_norvegicus
ENSPREG00000009841	neil3	100	49.584	ENSRBIG00000023002	NEIL3	100	49.584	Rhinopithecus_bieti
ENSPREG00000009841	neil3	100	49.750	ENSRROG00000000069	NEIL3	100	49.750	Rhinopithecus_roxellana
ENSPREG00000009841	neil3	100	48.929	ENSSBOG00000032601	NEIL3	100	48.929	Saimiri_boliviensis_boliviensis
ENSPREG00000009841	neil3	100	49.106	ENSSHAG00000007680	NEIL3	100	49.106	Sarcophilus_harrisii
ENSPREG00000009841	neil3	100	75.773	ENSSMAG00000009621	neil3	100	76.117	Scophthalmus_maximus
ENSPREG00000009841	neil3	100	51.256	ENSSSCG00000015771	NEIL3	100	51.256	Sus_scrofa
ENSPREG00000009841	neil3	100	49.180	ENSTTRG00000013224	NEIL3	100	49.344	Tursiops_truncatus
ENSPREG00000009841	neil3	100	46.129	ENSVPAG00000005020	NEIL3	100	46.129	Vicugna_pacos
ENSPREG00000009841	neil3	91	89.641	ENSXCOG00000014831	neil3	97	89.463	Xiphophorus_couchianus
ENSPREG00000009841	neil3	100	89.310	ENSXMAG00000028638	neil3	100	89.310	Xiphophorus_maculatus