EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000009899 (Gene tree)
Gene ID: 103473072
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 396 bases
Position: chrLG11:28326931-28327326
Accession: 103473072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000014642	LSM	PF01423.22	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000014793	-	396	XM_008423009	ENSPREP00000014642	131 (aa)	XP_008421231	UPI0004A395D8

Gene Model

Click here to download ENSPREG00000009899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000009899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000009899	oscp1a	61	32.099	ENSPREG00000011290	lsm4	53	30.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000009899	oscp1a	89	64.407	ENSG00000181817	LSM10	96	64.407	Homo_sapiens
ENSPREG00000009899	oscp1a	85	66.964	ENSAMEG00000019854	LSM10	91	66.964	Ailuropoda_melanoleuca
ENSPREG00000009899	oscp1a	89	72.650	ENSACIG00000015420	oscp1a	77	72.650	Amphilophus_citrinellus
ENSPREG00000009899	oscp1a	84	75.455	ENSAOCG00000015607	LSM10	85	75.455	Amphiprion_ocellaris
ENSPREG00000009899	oscp1a	90	77.119	ENSAOCG00000014654	-	98	77.119	Amphiprion_ocellaris
ENSPREG00000009899	oscp1a	90	77.119	ENSAOCG00000015618	LSM10	98	77.119	Amphiprion_ocellaris
ENSPREG00000009899	oscp1a	90	77.119	ENSAPEG00000021845	-	98	77.119	Amphiprion_percula
ENSPREG00000009899	oscp1a	84	75.455	ENSAPEG00000021851	LSM10	85	75.455	Amphiprion_percula
ENSPREG00000009899	oscp1a	85	74.107	ENSATEG00000006310	oscp1a	83	74.107	Anabas_testudineus
ENSPREG00000009899	oscp1a	89	58.120	ENSACAG00000001231	LSM10	95	58.120	Anolis_carolinensis
ENSPREG00000009899	oscp1a	89	62.393	ENSANAG00000031489	-	96	62.393	Aotus_nancymaae
ENSPREG00000009899	oscp1a	89	64.407	ENSANAG00000018759	-	96	64.407	Aotus_nancymaae
ENSPREG00000009899	oscp1a	89	70.085	ENSACLG00000004728	oscp1a	95	70.085	Astatotilapia_calliptera
ENSPREG00000009899	oscp1a	92	68.333	ENSAMXG00000025301	oscp1a	99	68.333	Astyanax_mexicanus
ENSPREG00000009899	oscp1a	92	61.983	ENSBTAG00000024096	LSM10	99	61.983	Bos_taurus
ENSPREG00000009899	oscp1a	89	65.254	ENSCJAG00000044880	LSM10	96	65.254	Callithrix_jacchus
ENSPREG00000009899	oscp1a	85	67.857	ENSCAFG00000003382	LSM10	91	67.857	Canis_familiaris
ENSPREG00000009899	oscp1a	85	67.857	ENSCAFG00020008920	LSM10	91	67.857	Canis_lupus_dingo
ENSPREG00000009899	oscp1a	92	61.983	ENSCHIG00000009398	LSM10	99	61.983	Capra_hircus
ENSPREG00000009899	oscp1a	88	64.348	ENSCAPG00000012567	LSM10	93	64.348	Cavia_aperea
ENSPREG00000009899	oscp1a	88	64.348	ENSCPOG00000039302	LSM10	93	64.348	Cavia_porcellus
ENSPREG00000009899	oscp1a	89	64.407	ENSCCAG00000018913	-	96	64.407	Cebus_capucinus
ENSPREG00000009899	oscp1a	89	61.538	ENSCCAG00000008378	-	95	61.538	Cebus_capucinus
ENSPREG00000009899	oscp1a	89	64.407	ENSCATG00000006589	LSM10	96	64.407	Cercocebus_atys
ENSPREG00000009899	oscp1a	85	66.071	ENSCLAG00000008633	LSM10	91	66.071	Chinchilla_lanigera
ENSPREG00000009899	oscp1a	89	64.407	ENSCSAG00000000134	LSM10	96	64.407	Chlorocebus_sabaeus
ENSPREG00000009899	oscp1a	85	63.158	ENSCHOG00000008615	LSM10	91	63.158	Choloepus_hoffmanni
ENSPREG00000009899	oscp1a	77	32.673	ENSCSAVG00000001896	-	86	32.673	Ciona_savignyi
ENSPREG00000009899	oscp1a	89	64.407	ENSCANG00000019928	LSM10	96	64.407	Colobus_angolensis_palliatus
ENSPREG00000009899	oscp1a	85	61.062	ENSCGRG00001022673	-	91	61.062	Cricetulus_griseus_chok1gshd
ENSPREG00000009899	oscp1a	85	66.964	ENSCGRG00001004317	-	92	66.964	Cricetulus_griseus_chok1gshd
ENSPREG00000009899	oscp1a	85	61.062	ENSCGRG00000015514	-	91	61.062	Cricetulus_griseus_crigri
ENSPREG00000009899	oscp1a	85	66.964	ENSCGRG00000014935	-	92	66.964	Cricetulus_griseus_crigri
ENSPREG00000009899	oscp1a	89	72.414	ENSCSEG00000010374	oscp1a	79	71.795	Cynoglossus_semilaevis
ENSPREG00000009899	oscp1a	97	70.079	ENSCVAG00000001536	oscp1a	96	70.079	Cyprinodon_variegatus
ENSPREG00000009899	oscp1a	90	68.644	ENSDARG00000101222	oscp1a	98	68.644	Danio_rerio
ENSPREG00000009899	oscp1a	60	74.359	ENSDARG00000109563	CABZ01074453.1	92	74.359	Danio_rerio
ENSPREG00000009899	oscp1a	85	66.964	ENSDNOG00000036662	LSM10	91	66.964	Dasypus_novemcinctus
ENSPREG00000009899	oscp1a	85	66.071	ENSDORG00000007579	Lsm10	91	66.071	Dipodomys_ordii
ENSPREG00000009899	oscp1a	86	64.602	ENSETEG00000005703	LSM10	92	64.602	Echinops_telfairi
ENSPREG00000009899	oscp1a	85	51.786	ENSEBUG00000001312	oscp1a	92	51.786	Eptatretus_burgeri
ENSPREG00000009899	oscp1a	85	66.964	ENSEASG00005012194	LSM10	91	66.964	Equus_asinus_asinus
ENSPREG00000009899	oscp1a	85	66.964	ENSECAG00000005071	LSM10	91	66.964	Equus_caballus
ENSPREG00000009899	oscp1a	85	67.857	ENSEEUG00000012032	LSM10	91	67.857	Erinaceus_europaeus
ENSPREG00000009899	oscp1a	90	72.881	ENSELUG00000007452	oscp1a	97	72.881	Esox_lucius
ENSPREG00000009899	oscp1a	89	64.655	ENSFALG00000000851	LSM10	94	64.655	Ficedula_albicollis
ENSPREG00000009899	oscp1a	85	66.071	ENSFDAG00000021056	LSM10	91	66.071	Fukomys_damarensis
ENSPREG00000009899	oscp1a	86	75.439	ENSFHEG00000001058	oscp1a	98	75.439	Fundulus_heteroclitus
ENSPREG00000009899	oscp1a	91	64.706	ENSGMOG00000019832	oscp1a	100	64.706	Gadus_morhua
ENSPREG00000009899	oscp1a	90	64.407	ENSGALG00000002127	LSM10	96	64.407	Gallus_gallus
ENSPREG00000009899	oscp1a	82	92.523	ENSGAFG00000016445	oscp1a	87	92.523	Gambusia_affinis
ENSPREG00000009899	oscp1a	93	72.131	ENSGACG00000002329	oscp1a	100	72.131	Gasterosteus_aculeatus
ENSPREG00000009899	oscp1a	89	63.793	ENSGAGG00000024848	LSM10	94	63.793	Gopherus_agassizii
ENSPREG00000009899	oscp1a	89	64.407	ENSGGOG00000003556	LSM10	96	64.407	Gorilla_gorilla
ENSPREG00000009899	oscp1a	89	70.940	ENSHBUG00000001722	oscp1a	95	70.940	Haplochromis_burtoni
ENSPREG00000009899	oscp1a	85	64.286	ENSHGLG00000011625	LSM10	91	64.286	Heterocephalus_glaber_female
ENSPREG00000009899	oscp1a	85	64.286	ENSHGLG00100001769	LSM10	91	64.286	Heterocephalus_glaber_male
ENSPREG00000009899	oscp1a	82	71.028	ENSIPUG00000005808	oscp1a	93	71.028	Ictalurus_punctatus
ENSPREG00000009899	oscp1a	85	66.964	ENSSTOG00000000606	LSM10	91	66.964	Ictidomys_tridecemlineatus
ENSPREG00000009899	oscp1a	92	75.833	ENSKMAG00000012143	oscp1a	99	75.833	Kryptolebias_marmoratus
ENSPREG00000009899	oscp1a	87	69.298	ENSLBEG00000017764	oscp1a	93	69.298	Labrus_bergylta
ENSPREG00000009899	oscp1a	85	59.821	ENSLACG00000015904	LSM10	86	59.821	Latimeria_chalumnae
ENSPREG00000009899	oscp1a	92	65.833	ENSLOCG00000018277	oscp1a	98	65.833	Lepisosteus_oculatus
ENSPREG00000009899	oscp1a	89	65.254	ENSLAFG00000009600	LSM10	96	65.254	Loxodonta_africana
ENSPREG00000009899	oscp1a	89	64.407	ENSMFAG00000009115	LSM10	96	64.407	Macaca_fascicularis
ENSPREG00000009899	oscp1a	89	64.407	ENSMMUG00000017338	LSM10	96	64.407	Macaca_mulatta
ENSPREG00000009899	oscp1a	89	64.407	ENSMNEG00000020023	LSM10	96	64.407	Macaca_nemestrina
ENSPREG00000009899	oscp1a	89	64.407	ENSMLEG00000025150	LSM10	96	64.407	Mandrillus_leucophaeus
ENSPREG00000009899	oscp1a	89	73.504	ENSMAMG00000004427	oscp1a	96	73.504	Mastacembelus_armatus
ENSPREG00000009899	oscp1a	89	70.085	ENSMZEG00005026307	oscp1a	95	70.085	Maylandia_zebra
ENSPREG00000009899	oscp1a	90	63.559	ENSMGAG00000015707	LSM10	96	63.559	Meleagris_gallopavo
ENSPREG00000009899	oscp1a	85	67.857	ENSMAUG00000016624	Lsm10	92	67.857	Mesocricetus_auratus
ENSPREG00000009899	oscp1a	85	67.857	ENSMOCG00000021943	Lsm10	92	67.857	Microtus_ochrogaster
ENSPREG00000009899	oscp1a	89	74.359	ENSMMOG00000013597	oscp1a	87	74.359	Mola_mola
ENSPREG00000009899	oscp1a	89	67.241	ENSMODG00000023328	LSM10	94	67.241	Monodelphis_domestica
ENSPREG00000009899	oscp1a	54	71.831	ENSMALG00000012661	oscp1a	55	71.831	Monopterus_albus
ENSPREG00000009899	oscp1a	85	66.964	MGP_CAROLIEiJ_G0026467	Lsm10	95	68.182	Mus_caroli
ENSPREG00000009899	oscp1a	85	66.964	ENSMUSG00000050188	Lsm10	95	68.182	Mus_musculus
ENSPREG00000009899	oscp1a	85	66.964	MGP_PahariEiJ_G0028798	Lsm10	95	68.182	Mus_pahari
ENSPREG00000009899	oscp1a	85	66.964	MGP_SPRETEiJ_G0027446	Lsm10	95	68.182	Mus_spretus
ENSPREG00000009899	oscp1a	85	67.857	ENSMPUG00000018593	LSM10	91	67.857	Mustela_putorius_furo
ENSPREG00000009899	oscp1a	88	65.217	ENSMLUG00000023895	LSM10	93	65.217	Myotis_lucifugus
ENSPREG00000009899	oscp1a	85	65.179	ENSNGAG00000015011	Lsm10	91	65.179	Nannospalax_galili
ENSPREG00000009899	oscp1a	94	68.293	ENSNBRG00000014306	oscp1a	100	68.293	Neolamprologus_brichardi
ENSPREG00000009899	oscp1a	89	64.407	ENSNLEG00000033754	LSM10	96	64.407	Nomascus_leucogenys
ENSPREG00000009899	oscp1a	89	67.241	ENSMEUG00000006313	LSM10	94	67.241	Notamacropus_eugenii
ENSPREG00000009899	oscp1a	87	65.789	ENSOPRG00000001699	LSM10	93	65.789	Ochotona_princeps
ENSPREG00000009899	oscp1a	85	66.071	ENSODEG00000019161	LSM10	91	66.071	Octodon_degus
ENSPREG00000009899	oscp1a	92	69.421	ENSONIG00000020904	oscp1a	99	69.421	Oreochromis_niloticus
ENSPREG00000009899	oscp1a	89	64.957	ENSOANG00000002066	LSM10	95	64.957	Ornithorhynchus_anatinus
ENSPREG00000009899	oscp1a	88	64.348	ENSOCUG00000005333	LSM10	93	64.348	Oryctolagus_cuniculus
ENSPREG00000009899	oscp1a	89	73.504	ENSORLG00000009504	oscp1a	97	73.504	Oryzias_latipes
ENSPREG00000009899	oscp1a	89	73.504	ENSORLG00020016201	oscp1a	97	73.504	Oryzias_latipes_hni
ENSPREG00000009899	oscp1a	85	75.000	ENSORLG00015007794	oscp1a	92	75.000	Oryzias_latipes_hsok
ENSPREG00000009899	oscp1a	85	66.964	ENSOGAG00000002653	LSM10	91	66.964	Otolemur_garnettii
ENSPREG00000009899	oscp1a	92	61.983	ENSOARG00000009596	LSM10	99	61.983	Ovis_aries
ENSPREG00000009899	oscp1a	89	64.407	ENSPPAG00000023465	LSM10	96	64.407	Pan_paniscus
ENSPREG00000009899	oscp1a	85	66.964	ENSPPRG00000014619	LSM10	91	66.964	Panthera_pardus
ENSPREG00000009899	oscp1a	85	66.964	ENSPTIG00000004613	LSM10	91	66.964	Panthera_tigris_altaica
ENSPREG00000009899	oscp1a	89	64.407	ENSPTRG00000000539	LSM10	96	64.407	Pan_troglodytes
ENSPREG00000009899	oscp1a	89	64.407	ENSPANG00000023172	LSM10	96	64.407	Papio_anubis
ENSPREG00000009899	oscp1a	92	68.333	ENSPKIG00000003728	oscp1a	97	68.333	Paramormyrops_kingsleyae
ENSPREG00000009899	oscp1a	89	62.931	ENSPSIG00000000590	LSM10	94	62.931	Pelodiscus_sinensis
ENSPREG00000009899	oscp1a	59	72.727	ENSPMGG00000015718	oscp1a	100	72.727	Periophthalmus_magnuspinnatus
ENSPREG00000009899	oscp1a	78	65.686	ENSPCIG00000014865	LSM10	75	65.686	Phascolarctos_cinereus
ENSPREG00000009899	oscp1a	90	95.763	ENSPFOG00000020490	oscp1a	100	95.763	Poecilia_formosa
ENSPREG00000009899	oscp1a	100	96.183	ENSPLAG00000016537	oscp1a	100	96.183	Poecilia_latipinna
ENSPREG00000009899	oscp1a	86	96.460	ENSPMEG00000000174	oscp1a	98	96.460	Poecilia_mexicana
ENSPREG00000009899	oscp1a	89	64.407	ENSPPYG00000001539	LSM10	96	64.407	Pongo_abelii
ENSPREG00000009899	oscp1a	89	64.957	ENSPCAG00000002520	LSM10	96	64.957	Procavia_capensis
ENSPREG00000009899	oscp1a	85	66.071	ENSPVAG00000008644	LSM10	91	66.071	Pteropus_vampyrus
ENSPREG00000009899	oscp1a	89	70.940	ENSPNYG00000003138	oscp1a	95	70.940	Pundamilia_nyererei
ENSPREG00000009899	oscp1a	89	70.085	ENSPNAG00000028829	oscp1a	97	70.085	Pygocentrus_nattereri
ENSPREG00000009899	oscp1a	85	66.071	ENSRNOG00000025716	Lsm10	92	66.071	Rattus_norvegicus
ENSPREG00000009899	oscp1a	89	64.407	ENSRBIG00000001561	LSM10	96	64.407	Rhinopithecus_bieti
ENSPREG00000009899	oscp1a	89	64.407	ENSRROG00000011414	LSM10	96	64.407	Rhinopithecus_roxellana
ENSPREG00000009899	oscp1a	89	64.407	ENSSBOG00000036413	-	96	64.407	Saimiri_boliviensis_boliviensis
ENSPREG00000009899	oscp1a	89	67.241	ENSSHAG00000018056	LSM10	94	67.241	Sarcophilus_harrisii
ENSPREG00000009899	oscp1a	91	73.950	ENSSFOG00015019954	lsm10	98	73.950	Scleropages_formosus
ENSPREG00000009899	oscp1a	89	74.359	ENSSMAG00000001297	oscp1a	100	74.359	Scophthalmus_maximus
ENSPREG00000009899	oscp1a	89	67.521	ENSSDUG00000007090	oscp1a	95	67.521	Seriola_dumerili
ENSPREG00000009899	oscp1a	89	68.376	ENSSLDG00000000800	oscp1a	97	68.376	Seriola_lalandi_dorsalis
ENSPREG00000009899	oscp1a	80	65.714	ENSSARG00000004211	LSM10	91	65.789	Sorex_araneus
ENSPREG00000009899	oscp1a	92	74.167	ENSSPAG00000009229	oscp1a	99	74.167	Stegastes_partitus
ENSPREG00000009899	oscp1a	89	65.254	ENSSSCG00000038916	LSM10	96	65.254	Sus_scrofa
ENSPREG00000009899	oscp1a	89	64.655	ENSTGUG00000001600	-	95	64.655	Taeniopygia_guttata
ENSPREG00000009899	oscp1a	89	65.517	ENSTGUG00000001602	-	95	65.517	Taeniopygia_guttata
ENSPREG00000009899	oscp1a	90	72.034	ENSTRUG00000010531	oscp1a	95	72.034	Takifugu_rubripes
ENSPREG00000009899	oscp1a	89	65.254	ENSTBEG00000016674	LSM10	96	65.254	Tupaia_belangeri
ENSPREG00000009899	oscp1a	85	67.857	ENSUAMG00000020265	LSM10	91	67.857	Ursus_americanus
ENSPREG00000009899	oscp1a	91	65.289	ENSUMAG00000001438	LSM10	56	65.289	Ursus_maritimus
ENSPREG00000009899	oscp1a	85	67.857	ENSVVUG00000023209	LSM10	91	67.857	Vulpes_vulpes
ENSPREG00000009899	oscp1a	90	59.322	ENSXETG00000027631	lsm10	96	59.322	Xenopus_tropicalis
ENSPREG00000009899	oscp1a	96	95.238	ENSXCOG00000018776	oscp1a	79	95.238	Xiphophorus_couchianus
ENSPREG00000009899	oscp1a	85	94.643	ENSXMAG00000019963	oscp1a	90	94.643	Xiphophorus_maculatus