EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000010146 (Gene tree)
Gene ID
103469407
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
2989 bases
Position
chrLG8:26316366-26319354
Accession
103469407
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000015017MMR_HSR1PF01926.237.8e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000015173-848XM_008417060ENSPREP00000015017220 (aa)XP_008415282UPI0002939A04
Gene Model
Click here to download ENSPREG00000010146's gene model file
Pathways
Pathway IDPathway NameSource
pret04144EndocytosisKEGG
pret04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010146's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000010146rab5c7148.408ENSPREG00000017324rab11al7348.408
ENSPREG00000010146rab5c7238.994ENSPREG00000019783RAB157638.994
ENSPREG00000010146rab5c8944.615ENSPREG00000004889-9344.615
ENSPREG00000010146rab5c7842.614ENSPREG00000017750RAB7A9938.835
ENSPREG00000010146rab5c7437.805ENSPREG00000009597-7737.805
ENSPREG00000010146rab5c6436.429ENSPREG00000022509rab237437.500
ENSPREG00000010146rab5c5431.148ENSPREG00000004191arl8ba6330.645
ENSPREG00000010146rab5c7438.415ENSPREG00000013962rab42a7538.415
ENSPREG00000010146rab5c7530.952ENSPREG00000008951rab34a6730.952
ENSPREG00000010146rab5c7539.181ENSPREG00000007017zgc:1015597339.181
ENSPREG00000010146rab5c8937.313ENSPREG00000005323si:dkey-16l2.169635.821
ENSPREG00000010146rab5c7038.710ENSPREG00000014761rabl27538.710
ENSPREG00000010146rab5c5531.452ENSPREG00000021315arl8bb6331.452
ENSPREG00000010146rab5c7133.125ENSPREG00000009813rab34b6333.125
ENSPREG00000010146rab5c7644.311ENSPREG00000021505rab6a8044.311
ENSPREG00000010146rab5c9240.099ENSPREG00000015480rab6ba9340.099
ENSPREG00000010146rab5c7235.583ENSPREG00000022241si:dkey-13a21.47935.583
ENSPREG00000010146rab5c8889.691ENSPREG00000022167-8992.896
ENSPREG00000010146rab5c8642.105ENSPREG00000017344-8842.105
ENSPREG00000010146rab5c7537.912ENSPREG00000000880rab33ba7637.430
ENSPREG00000010146rab5c8540.212ENSPREG00000005923rab18a7041.954
ENSPREG00000010146rab5c7334.132ENSPREG00000020276RAB298134.132
ENSPREG00000010146rab5c5431.148ENSPREG00000004992arl8a6631.061
ENSPREG00000010146rab5c8544.211ENSPREG00000017517zgc:1719277646.012
ENSPREG00000010146rab5c9533.945ENSPREG00000006970rab9b9533.028
ENSPREG00000010146rab5c8940.594ENSPREG00000014634rab309440.796
ENSPREG00000010146rab5c8945.226ENSPREG00000006119rab25a9245.226
ENSPREG00000010146rab5c7942.697ENSPREG00000012148RAB7A9939.320
ENSPREG00000010146rab5c7534.337ENSPREG00000018287KRAS9033.333
ENSPREG00000010146rab5c7447.239ENSPREG00000014269rab11bb7547.239
ENSPREG00000010146rab5c9039.216ENSPREG00000014888rab2a7644.099
ENSPREG00000010146rab5c8941.176ENSPREG00000009605rab11a9341.584
ENSPREG00000010146rab5c7447.239ENSPREG00000006357rab11ba5847.239
ENSPREG00000010146rab5c7745.977ENSPREG00000017337rab25b7846.626
ENSPREG00000010146rab5c8942.929ENSPREG00000003616rab1ba8146.626
ENSPREG00000010146rab5c8930.457ENSPREG00000019341hrasb9530.457
ENSPREG00000010146rab5c7535.294ENSPREG00000012522-8435.294
ENSPREG00000010146rab5c7342.236ENSPREG00000017567rab138142.236
ENSPREG00000010146rab5c8130.000ENSPREG00000006363rras8132.298
ENSPREG00000010146rab5c7841.860ENSPREG00000010154rab4a7643.478
ENSPREG00000010146rab5c7933.520ENSPREG00000001864-7732.584
ENSPREG00000010146rab5c8945.000ENSPREG00000020321rab1ab8047.239
ENSPREG00000010146rab5c7637.500ENSPREG00000017487rab126937.500
ENSPREG00000010146rab5c8941.063ENSPREG00000006336-7547.239
ENSPREG00000010146rab5c5032.143ENSPREG00000016664rap2b8933.600
ENSPREG00000010146rab5c7453.988ENSPREG00000010920rab22a8453.988
ENSPREG00000010146rab5c6838.065ENSPREG00000001832rab9a7638.065
ENSPREG00000010146rab5c7943.103ENSPREG00000009535RAB418243.103
ENSPREG00000010146rab5c7537.349ENSPREG00000007129RAB39B7737.805
ENSPREG00000010146rab5c7339.130ENSPREG00000010284rab157639.130
ENSPREG00000010146rab5c7031.818ENSPREG00000010752rheb8432.468
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000010146rab5c9891.204ENSG00000108774RAB5C10095.604Homo_sapiens
ENSPREG00000010146rab5c10095.909ENSAPOG00000016864rab5c10095.909Acanthochromis_polyacanthus
ENSPREG00000010146rab5c9891.204ENSAMEG00000006003RAB5C9989.815Ailuropoda_melanoleuca
ENSPREG00000010146rab5c10096.818ENSACIG00000010896rab5c10096.818Amphilophus_citrinellus
ENSPREG00000010146rab5c10095.909ENSAOCG00000016614rab5c10095.909Amphiprion_ocellaris
ENSPREG00000010146rab5c9895.370ENSAPEG00000017868-9995.814Amphiprion_percula
ENSPREG00000010146rab5c9997.235ENSATEG00000001937rab5c9997.235Anabas_testudineus
ENSPREG00000010146rab5c9393.171ENSANAG00000025390RAB5C10091.220Aotus_nancymaae
ENSPREG00000010146rab5c9689.623ENSACLG00000008615-10088.288Astatotilapia_calliptera
ENSPREG00000010146rab5c10095.455ENSACLG00000002706rab5c10095.455Astatotilapia_calliptera
ENSPREG00000010146rab5c9591.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSPREG00000010146rab5c10097.738ENSAMXG00000043717rab5c10097.738Astyanax_mexicanus
ENSPREG00000010146rab5c9891.204ENSBTAG00000006982RAB5C9989.352Bos_taurus
ENSPREG00000010146rab5c9874.312WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSPREG00000010146rab5c9891.204ENSCAFG00000015629RAB5C9989.815Canis_familiaris
ENSPREG00000010146rab5c9891.204ENSCAFG00020013537RAB5C9989.815Canis_lupus_dingo
ENSPREG00000010146rab5c9891.204ENSCHIG00000012960RAB5C9989.352Capra_hircus
ENSPREG00000010146rab5c9891.667ENSTSYG00000030531RAB5C9989.815Carlito_syrichta
ENSPREG00000010146rab5c9891.204ENSCCAG00000025940RAB5C9989.352Cebus_capucinus
ENSPREG00000010146rab5c9891.204ENSCATG00000040873RAB5C9989.815Cercocebus_atys
ENSPREG00000010146rab5c9891.204ENSCLAG00000016650RAB5C9989.352Chinchilla_lanigera
ENSPREG00000010146rab5c8195.506ENSCHOG00000009886RAB5C10095.506Choloepus_hoffmanni
ENSPREG00000010146rab5c10074.545ENSCING00000003340-10074.091Ciona_intestinalis
ENSPREG00000010146rab5c9975.446ENSCSAVG00000000613-9983.333Ciona_savignyi
ENSPREG00000010146rab5c9891.204ENSCGRG00001014226Rab5c9989.352Cricetulus_griseus_chok1gshd
ENSPREG00000010146rab5c9891.204ENSCGRG00000007534Rab5c9989.352Cricetulus_griseus_crigri
ENSPREG00000010146rab5c10094.545ENSCSEG00000017024rab5c10094.545Cynoglossus_semilaevis
ENSPREG00000010146rab5c10097.727ENSCVAG00000009550rab5c10097.727Cyprinodon_variegatus
ENSPREG00000010146rab5c9891.204ENSDNOG00000038853RAB5C9988.889Dasypus_novemcinctus
ENSPREG00000010146rab5c9891.204ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSPREG00000010146rab5c9871.628FBgn0014010Rab58480.000Drosophila_melanogaster
ENSPREG00000010146rab5c9977.880ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSPREG00000010146rab5c9891.204ENSEASG00005009281RAB5C9989.815Equus_asinus_asinus
ENSPREG00000010146rab5c9891.667ENSECAG00000025054RAB5C9989.815Equus_caballus
ENSPREG00000010146rab5c9891.204ENSEEUG00000002790RAB5C9989.352Erinaceus_europaeus
ENSPREG00000010146rab5c9894.444ENSELUG00000018516rab5c9994.444Esox_lucius
ENSPREG00000010146rab5c10090.455ENSELUG00000010439-10090.455Esox_lucius
ENSPREG00000010146rab5c9891.204ENSFCAG00000002148RAB5C9989.352Felis_catus
ENSPREG00000010146rab5c9890.741ENSFDAG00000021541RAB5C9988.889Fukomys_damarensis
ENSPREG00000010146rab5c9990.411ENSFHEG00000015268-9990.411Fundulus_heteroclitus
ENSPREG00000010146rab5c10099.091ENSFHEG00000012117rab5c10099.091Fundulus_heteroclitus
ENSPREG00000010146rab5c10095.000ENSGMOG00000015096rab5c10095.000Gadus_morhua
ENSPREG00000010146rab5c7688.095ENSGMOG00000001876-9788.095Gadus_morhua
ENSPREG00000010146rab5c100100.000ENSGAFG00000000884rab5c100100.000Gambusia_affinis
ENSPREG00000010146rab5c9590.909ENSGAFG00000003642-9988.739Gambusia_affinis
ENSPREG00000010146rab5c10092.727ENSGACG00000008659rab5c10092.727Gasterosteus_aculeatus
ENSPREG00000010146rab5c9891.204ENSGGOG00000005472RAB5C9989.815Gorilla_gorilla
ENSPREG00000010146rab5c9689.623ENSHBUG00000006823-10088.288Haplochromis_burtoni
ENSPREG00000010146rab5c10095.455ENSHBUG00000002014rab5c10095.455Haplochromis_burtoni
ENSPREG00000010146rab5c9890.278ENSHGLG00000012067RAB5C9987.963Heterocephalus_glaber_female
ENSPREG00000010146rab5c9996.804ENSHCOG00000004662rab5c9896.804Hippocampus_comes
ENSPREG00000010146rab5c9582.381ENSHCOG00000020238-10080.263Hippocampus_comes
ENSPREG00000010146rab5c9594.258ENSIPUG00000020082rab5c10094.595Ictalurus_punctatus
ENSPREG00000010146rab5c9890.741ENSSTOG00000006620RAB5C9989.352Ictidomys_tridecemlineatus
ENSPREG00000010146rab5c9891.667ENSJJAG00000021181Rab5c9989.352Jaculus_jaculus
ENSPREG00000010146rab5c10097.727ENSKMAG00000020038rab5c10097.727Kryptolebias_marmoratus
ENSPREG00000010146rab5c9990.411ENSKMAG00000017417-9990.411Kryptolebias_marmoratus
ENSPREG00000010146rab5c10090.045ENSLBEG00000010408-10090.045Labrus_bergylta
ENSPREG00000010146rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSPREG00000010146rab5c9892.593ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSPREG00000010146rab5c9891.204ENSMFAG00000039627RAB5C9989.815Macaca_fascicularis
ENSPREG00000010146rab5c9891.204ENSMNEG00000000355RAB5C9989.815Macaca_nemestrina
ENSPREG00000010146rab5c9990.868ENSMAMG00000016207-9990.868Mastacembelus_armatus
ENSPREG00000010146rab5c10096.818ENSMAMG00000022322rab5c10096.818Mastacembelus_armatus
ENSPREG00000010146rab5c9689.623ENSMZEG00005021090-10088.288Maylandia_zebra
ENSPREG00000010146rab5c10095.455ENSMZEG00005022735rab5c10095.455Maylandia_zebra
ENSPREG00000010146rab5c9891.667ENSMAUG00000015005Rab5c9989.815Mesocricetus_auratus
ENSPREG00000010146rab5c9891.204ENSMICG00000041608RAB5C9989.352Microcebus_murinus
ENSPREG00000010146rab5c9891.667ENSMOCG00000018531-9989.352Microtus_ochrogaster
ENSPREG00000010146rab5c10096.364ENSMMOG00000020621rab5c10096.364Mola_mola
ENSPREG00000010146rab5c9889.767ENSMALG00000006052rab5c9789.954Monopterus_albus
ENSPREG00000010146rab5c9989.041ENSMALG00000022348-9989.041Monopterus_albus
ENSPREG00000010146rab5c9891.667MGP_CAROLIEiJ_G0017184Rab5c9989.815Mus_caroli
ENSPREG00000010146rab5c9891.667ENSMUSG00000019173Rab5c9989.815Mus_musculus
ENSPREG00000010146rab5c9891.667MGP_PahariEiJ_G0018314Rab5c9989.815Mus_pahari
ENSPREG00000010146rab5c9891.667MGP_SPRETEiJ_G0018027Rab5c9989.815Mus_spretus
ENSPREG00000010146rab5c9891.204ENSMPUG00000010554RAB5C9989.815Mustela_putorius_furo
ENSPREG00000010146rab5c9891.204ENSNGAG00000010286Rab5c9989.352Nannospalax_galili
ENSPREG00000010146rab5c10096.364ENSNBRG00000018165rab5c10096.364Neolamprologus_brichardi
ENSPREG00000010146rab5c9689.623ENSNBRG00000016922-10088.288Neolamprologus_brichardi
ENSPREG00000010146rab5c8188.764ENSOPRG00000008255RAB5C10088.764Ochotona_princeps
ENSPREG00000010146rab5c9890.741ENSODEG00000017920RAB5C9988.889Octodon_degus
ENSPREG00000010146rab5c10096.364ENSONIG00000001113rab5c10096.364Oreochromis_niloticus
ENSPREG00000010146rab5c9996.774ENSORLG00000003882rab5c9996.774Oryzias_latipes
ENSPREG00000010146rab5c9996.774ENSORLG00020008388rab5c9996.774Oryzias_latipes_hni
ENSPREG00000010146rab5c9996.774ENSORLG00015021900rab5c9996.774Oryzias_latipes_hsok
ENSPREG00000010146rab5c9996.774ENSOMEG00000023078rab5c9996.774Oryzias_melastigma
ENSPREG00000010146rab5c9891.667ENSOGAG00000009456RAB5C9989.815Otolemur_garnettii
ENSPREG00000010146rab5c9891.204ENSOARG00000018768RAB5C9989.352Ovis_aries
ENSPREG00000010146rab5c9891.204ENSPPAG00000037206RAB5C9989.815Pan_paniscus
ENSPREG00000010146rab5c9891.204ENSPPRG00000005745RAB5C9989.352Panthera_pardus
ENSPREG00000010146rab5c9891.204ENSPTIG00000008177RAB5C9989.352Panthera_tigris_altaica
ENSPREG00000010146rab5c9891.204ENSPTRG00000009194RAB5C9989.815Pan_troglodytes
ENSPREG00000010146rab5c9887.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSPREG00000010146rab5c9888.889ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSPREG00000010146rab5c10093.182ENSPMGG00000010792rab5c9994.884Periophthalmus_magnuspinnatus
ENSPREG00000010146rab5c9891.667ENSPEMG00000017971Rab5c9989.352Peromyscus_maniculatus_bairdii
ENSPREG00000010146rab5c9878.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSPREG00000010146rab5c9975.115ENSPMAG00000001399rab5c9976.389Petromyzon_marinus
ENSPREG00000010146rab5c9876.389ENSPMAG00000007867rab5c8983.511Petromyzon_marinus
ENSPREG00000010146rab5c9891.204ENSPCIG00000020225-9989.815Phascolarctos_cinereus
ENSPREG00000010146rab5c9989.954ENSPLAG00000016333-10089.954Poecilia_latipinna
ENSPREG00000010146rab5c100100.000ENSPLAG00000004790rab5c100100.000Poecilia_latipinna
ENSPREG00000010146rab5c100100.000ENSPMEG00000011336rab5c100100.000Poecilia_mexicana
ENSPREG00000010146rab5c9691.080ENSPMEG00000012614-10089.686Poecilia_mexicana
ENSPREG00000010146rab5c9891.204ENSPPYG00000008398RAB5C9989.815Pongo_abelii
ENSPREG00000010146rab5c9890.278ENSPCAG00000016412RAB5C9988.426Procavia_capensis
ENSPREG00000010146rab5c9890.741ENSPCOG00000026327RAB5C9988.889Propithecus_coquereli
ENSPREG00000010146rab5c9891.667ENSPVAG00000003867RAB5C9989.815Pteropus_vampyrus
ENSPREG00000010146rab5c10095.455ENSPNYG00000010615rab5c10095.455Pundamilia_nyererei
ENSPREG00000010146rab5c9689.623ENSPNYG00000015851-10088.288Pundamilia_nyererei
ENSPREG00000010146rab5c10096.833ENSPNAG00000028138rab5c10096.833Pygocentrus_nattereri
ENSPREG00000010146rab5c9589.474ENSPNAG00000002218-9889.474Pygocentrus_nattereri
ENSPREG00000010146rab5c9891.667ENSRNOG00000018568Rab5c9989.815Rattus_norvegicus
ENSPREG00000010146rab5c9891.204ENSRBIG00000031376RAB5C9989.815Rhinopithecus_bieti
ENSPREG00000010146rab5c9891.204ENSRROG00000032895RAB5C9989.815Rhinopithecus_roxellana
ENSPREG00000010146rab5c9891.204ENSSBOG00000032552-9989.352Saimiri_boliviensis_boliviensis
ENSPREG00000010146rab5c9891.667ENSSHAG00000005267-9990.278Sarcophilus_harrisii
ENSPREG00000010146rab5c10088.182ENSSFOG00015009988-10088.182Scleropages_formosus
ENSPREG00000010146rab5c9596.651ENSSMAG00000007323rab5c10095.909Scophthalmus_maximus
ENSPREG00000010146rab5c10097.727ENSSDUG00000023008rab5c10097.727Seriola_dumerili
ENSPREG00000010146rab5c10096.818ENSSLDG00000017771rab5c10096.818Seriola_lalandi_dorsalis
ENSPREG00000010146rab5c9892.130ENSSPUG00000012950-9990.278Sphenodon_punctatus
ENSPREG00000010146rab5c10097.727ENSSPAG00000006436rab5c10097.727Stegastes_partitus
ENSPREG00000010146rab5c9891.204ENSSSCG00000032467RAB5C9989.352Sus_scrofa
ENSPREG00000010146rab5c10095.000ENSTRUG00000015590rab5c10095.000Takifugu_rubripes
ENSPREG00000010146rab5c9696.682ENSTNIG00000011711rab5c9596.682Tetraodon_nigroviridis
ENSPREG00000010146rab5c9891.204ENSTBEG00000007092RAB5C9989.815Tupaia_belangeri
ENSPREG00000010146rab5c9890.741ENSTTRG00000006673RAB5C9988.889Tursiops_truncatus
ENSPREG00000010146rab5c9891.204ENSUAMG00000024343RAB5C9989.815Ursus_americanus
ENSPREG00000010146rab5c9891.204ENSUMAG00000023270RAB5C9989.815Ursus_maritimus
ENSPREG00000010146rab5c10099.545ENSXCOG00000016788rab5c10099.545Xiphophorus_couchianus
ENSPREG00000010146rab5c9591.388ENSXCOG00000006300-9989.189Xiphophorus_couchianus
ENSPREG00000010146rab5c9989.498ENSXMAG00000022179-10089.498Xiphophorus_maculatus
ENSPREG00000010146rab5c100100.000ENSXMAG00000003266rab5c100100.000Xiphophorus_maculatus

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