EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010154 (Gene tree)
Gene ID: 103462809
Gene Symbol: rab4a
Alias: fc93b03|wu:fc93b03
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10546 bases
Position: chrLG3:27358443-27368988
Accession: 103462809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015037	MMR_HSR1	PF01926.23	0.00015	1	1
ENSPREP00000015044	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015200	-	5236	-	ENSPREP00000015044	225 (aa)	-	-
ENSPRET00000015193	-	4783	XM_008405810	ENSPREP00000015037	213 (aa)	XP_008404032	UPI000293A040

Gene Model

Click here to download ENSPREG00000010154's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010154	rab4a	100	36.986	ENSPREG00000019783	RAB15	100	36.986
ENSPREG00000010154	rab4a	100	40.000	ENSPREG00000007129	RAB39B	100	40.000
ENSPREG00000010154	rab4a	80	43.275	ENSPREG00000022167	-	85	41.566
ENSPREG00000010154	rab4a	75	56.250	ENSPREG00000006336	-	73	56.250
ENSPREG00000010154	rab4a	81	33.146	ENSPREG00000018287	KRAS	93	33.146
ENSPREG00000010154	rab4a	53	32.743	ENSPREG00000016664	rap2b	89	33.600
ENSPREG00000010154	rab4a	98	53.589	ENSPREG00000014888	rab2a	98	53.589
ENSPREG00000010154	rab4a	76	33.333	ENSPREG00000019341	hrasb	85	33.333
ENSPREG00000010154	rab4a	99	58.294	ENSPREG00000017344	-	97	58.294
ENSPREG00000010154	rab4a	78	38.857	ENSPREG00000009535	RAB41	83	38.857
ENSPREG00000010154	rab4a	78	40.936	ENSPREG00000021505	rab6a	82	40.936
ENSPREG00000010154	rab4a	77	36.310	ENSPREG00000001832	rab9a	83	36.310
ENSPREG00000010154	rab4a	100	41.784	ENSPREG00000004889	-	96	41.784
ENSPREG00000010154	rab4a	81	33.526	ENSPREG00000006363	rras	87	33.526
ENSPREG00000010154	rab4a	78	36.471	ENSPREG00000022241	si:dkey-13a21.4	83	36.471
ENSPREG00000010154	rab4a	81	45.349	ENSPREG00000017567	rab13	86	45.349
ENSPREG00000010154	rab4a	77	36.095	ENSPREG00000012522	-	84	36.095
ENSPREG00000010154	rab4a	86	44.022	ENSPREG00000005923	rab18a	74	44.022
ENSPREG00000010154	rab4a	83	47.727	ENSPREG00000017337	rab25b	84	47.727
ENSPREG00000010154	rab4a	66	35.714	ENSPREG00000022509	rab23	78	35.000
ENSPREG00000010154	rab4a	71	40.606	ENSPREG00000001864	-	71	40.606
ENSPREG00000010154	rab4a	76	43.478	ENSPREG00000010146	rab5c	78	41.860
ENSPREG00000010154	rab4a	84	37.158	ENSPREG00000017750	RAB7A	88	37.158
ENSPREG00000010154	rab4a	81	46.243	ENSPREG00000017517	zgc:171927	81	46.243
ENSPREG00000010154	rab4a	99	42.254	ENSPREG00000020321	rab1ab	100	42.254
ENSPREG00000010154	rab4a	83	45.763	ENSPREG00000014634	rab30	87	45.763
ENSPREG00000010154	rab4a	97	32.227	ENSPREG00000007017	zgc:101559	85	32.227
ENSPREG00000010154	rab4a	77	38.372	ENSPREG00000006970	rab9b	77	38.372
ENSPREG00000010154	rab4a	96	47.059	ENSPREG00000009605	rab11a	94	47.059
ENSPREG00000010154	rab4a	83	34.637	ENSPREG00000009813	rab34b	70	34.637
ENSPREG00000010154	rab4a	54	31.092	ENSPREG00000008262	arl8	63	31.092
ENSPREG00000010154	rab4a	79	40.237	ENSPREG00000005323	si:dkey-16l2.16	80	40.237
ENSPREG00000010154	rab4a	70	33.987	ENSPREG00000008951	rab34a	62	33.987
ENSPREG00000010154	rab4a	83	48.295	ENSPREG00000006119	rab25a	88	48.611
ENSPREG00000010154	rab4a	80	54.386	ENSPREG00000014269	rab11bb	77	54.386
ENSPREG00000010154	rab4a	89	42.188	ENSPREG00000009597	-	90	42.188
ENSPREG00000010154	rab4a	79	40.828	ENSPREG00000017487	rab12	70	40.936
ENSPREG00000010154	rab4a	80	40.588	ENSPREG00000010284	rab15	80	40.588
ENSPREG00000010154	rab4a	72	30.519	ENSPREG00000010752	rheb	84	30.519
ENSPREG00000010154	rab4a	80	32.749	ENSPREG00000014761	rabl2	81	32.749
ENSPREG00000010154	rab4a	90	36.458	ENSPREG00000015480	rab6ba	89	36.458
ENSPREG00000010154	rab4a	82	33.514	ENSPREG00000020276	RAB29	86	33.514
ENSPREG00000010154	rab4a	76	40.373	ENSPREG00000010920	rab22a	83	40.373
ENSPREG00000010154	rab4a	89	35.938	ENSPREG00000013962	rab42a	88	35.938
ENSPREG00000010154	rab4a	80	53.801	ENSPREG00000006357	rab11ba	60	53.801
ENSPREG00000010154	rab4a	72	36.709	ENSPREG00000010228	dnajc27	81	36.709
ENSPREG00000010154	rab4a	83	47.159	ENSPREG00000003616	rab1ba	88	47.159
ENSPREG00000010154	rab4a	54	33.613	ENSPREG00000008730	arl5c	63	33.613
ENSPREG00000010154	rab4a	76	34.857	ENSPREG00000000880	rab33ba	76	34.444
ENSPREG00000010154	rab4a	84	37.705	ENSPREG00000012148	RAB7A	88	37.705
ENSPREG00000010154	rab4a	81	32.386	ENSPREG00000012803	rhebl1	93	32.203
ENSPREG00000010154	rab4a	75	55.000	ENSPREG00000017324	rab11al	74	55.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010154	rab4a	100	98.592	ENSCVAG00000010727	rab4a	100	98.592	Cyprinodon_variegatus
ENSPREG00000010154	rab4a	100	94.366	ENSELUG00000014785	rab4a	100	94.366	Esox_lucius
ENSPREG00000010154	rab4a	100	99.061	ENSFHEG00000010509	rab4a	100	99.061	Fundulus_heteroclitus
ENSPREG00000010154	rab4a	100	100.000	ENSGAFG00000005477	rab4a	100	100.000	Gambusia_affinis
ENSPREG00000010154	rab4a	100	97.196	ENSGACG00000016164	rab4a	98	97.196	Gasterosteus_aculeatus
ENSPREG00000010154	rab4a	100	99.061	ENSKMAG00000020250	rab4a	100	99.061	Kryptolebias_marmoratus
ENSPREG00000010154	rab4a	100	98.122	ENSLBEG00000003101	rab4a	100	98.122	Labrus_bergylta
ENSPREG00000010154	rab4a	100	96.714	ENSMMOG00000015287	rab4a	100	96.714	Mola_mola
ENSPREG00000010154	rab4a	100	100.000	ENSPFOG00000014630	rab4a	100	100.000	Poecilia_formosa
ENSPREG00000010154	rab4a	100	100.000	ENSPLAG00000014563	rab4a	100	100.000	Poecilia_latipinna
ENSPREG00000010154	rab4a	100	100.000	ENSPMEG00000012205	rab4a	100	100.000	Poecilia_mexicana
ENSPREG00000010154	rab4a	100	94.366	ENSSFOG00015015336	rab4a	100	94.366	Scleropages_formosus
ENSPREG00000010154	rab4a	100	100.000	ENSXMAG00000026193	rab4a	100	100.000	Xiphophorus_maculatus