EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000010174 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
25203 bases
Position
chrLG13:2527919-2553121
Accession
103474198
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000015219tRNA_anti-codonPF01336.252.9e-1211
ENSPREP00000015202tRNA_anti-codonPF01336.252.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000015375-1614XM_008424999ENSPREP00000015219537 (aa)XP_008423221-
ENSPRET00000015359-1590-ENSPREP00000015202529 (aa)--
Gene Model
Click here to download ENSPREG00000010174's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010174's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000010174rpa19161.190ENSPREG00000010119RPA18162.871
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000010174rpa18863.409ENSAPOG00000019409RPA17663.409Acanthochromis_polyacanthus
ENSPREG00000010174rpa19576.964ENSAPOG00000011658rpa19377.102Acanthochromis_polyacanthus
ENSPREG00000010174rpa19556.140ENSAMEG00000007706RPA19156.140Ailuropoda_melanoleuca
ENSPREG00000010174rpa18176.520ENSACIG00000007277rpa18776.299Amphilophus_citrinellus
ENSPREG00000010174rpa19256.937ENSACIG00000012881RPA19456.937Amphilophus_citrinellus
ENSPREG00000010174rpa19575.714ENSAOCG00000023376rpa19375.850Amphiprion_ocellaris
ENSPREG00000010174rpa19951.975ENSAOCG00000009003RPA19752.765Amphiprion_ocellaris
ENSPREG00000010174rpa19362.264ENSAPEG00000019132RPA18262.264Amphiprion_percula
ENSPREG00000010174rpa19575.893ENSAPEG00000008634rpa19376.029Amphiprion_percula
ENSPREG00000010174rpa19652.666ENSATEG00000006443RPA19452.666Anabas_testudineus
ENSPREG00000010174rpa19275.373ENSATEG00000022024rpa19773.779Anabas_testudineus
ENSPREG00000010174rpa19467.164ENSAPLG00000012442RPA18067.164Anas_platyrhynchos
ENSPREG00000010174rpa19663.200ENSACAG00000014490RPA18463.200Anolis_carolinensis
ENSPREG00000010174rpa19556.655ENSANAG00000023456RPA19357.754Aotus_nancymaae
ENSPREG00000010174rpa19655.519ENSACLG00000005223RPA19455.519Astatotilapia_calliptera
ENSPREG00000010174rpa19076.371ENSACLG00000006640rpa19476.371Astatotilapia_calliptera
ENSPREG00000010174rpa19668.301ENSAMXG00000008418rpa19468.651Astyanax_mexicanus
ENSPREG00000010174rpa19555.323ENSBTAG00000009711RPA19454.281Bos_taurus
ENSPREG00000010174rpa16630.500WBGene00017546rpa-16030.500Caenorhabditis_elegans
ENSPREG00000010174rpa19555.113ENSCJAG00000001848RPA19157.041Callithrix_jacchus
ENSPREG00000010174rpa19654.966ENSCAFG00000019249RPA19454.966Canis_familiaris
ENSPREG00000010174rpa19654.966ENSCAFG00020009847RPA19454.966Canis_lupus_dingo
ENSPREG00000010174rpa19655.938ENSCHIG00000026308RPA19454.623Capra_hircus
ENSPREG00000010174rpa19654.359ENSTSYG00000003482-9454.359Carlito_syrichta
ENSPREG00000010174rpa19556.514ENSCPOG00000000035RPA19256.316Cavia_porcellus
ENSPREG00000010174rpa19552.481ENSCCAG00000010981RPA19054.902Cebus_capucinus
ENSPREG00000010174rpa19951.261ENSCLAG00000015045-9651.261Chinchilla_lanigera
ENSPREG00000010174rpa19654.905ENSCLAG00000005185-9454.905Chinchilla_lanigera
ENSPREG00000010174rpa19653.745ENSCSAG00000013833RPA19453.933Chlorocebus_sabaeus
ENSPREG00000010174rpa19255.216ENSCHOG00000013540-9455.396Choloepus_hoffmanni
ENSPREG00000010174rpa16762.376ENSCHOG00000009454-9262.376Choloepus_hoffmanni
ENSPREG00000010174rpa19655.842ENSCPBG00000020377RPA19457.090Chrysemys_picta_bellii
ENSPREG00000010174rpa19540.141ENSCING00000023482-9240.141Ciona_intestinalis
ENSPREG00000010174rpa19455.893ENSCANG00000030911RPA19455.893Colobus_angolensis_palliatus
ENSPREG00000010174rpa19654.839ENSCGRG00001008197Rpa19554.839Cricetulus_griseus_chok1gshd
ENSPREG00000010174rpa17756.513ENSCGRG00000000582Rpa19356.723Cricetulus_griseus_crigri
ENSPREG00000010174rpa19670.415ENSCSEG00000013066rpa19371.454Cynoglossus_semilaevis
ENSPREG00000010174rpa19550.769ENSCSEG00000012726RPA19351.730Cynoglossus_semilaevis
ENSPREG00000010174rpa19580.919ENSCVAG00000019431rpa19381.239Cyprinodon_variegatus
ENSPREG00000010174rpa19562.774ENSCVAG00000013446-8562.774Cyprinodon_variegatus
ENSPREG00000010174rpa19666.316ENSDARG00000003938rpa19466.316Danio_rerio
ENSPREG00000010174rpa19556.437ENSDNOG00000017218RPA19256.239Dasypus_novemcinctus
ENSPREG00000010174rpa19655.786ENSDORG00000006199Rpa19455.786Dipodomys_ordii
ENSPREG00000010174rpa19638.648FBgn0010173RpA-709339.688Drosophila_melanogaster
ENSPREG00000010174rpa18572.308ENSETEG00000017608RPA17672.308Echinops_telfairi
ENSPREG00000010174rpa19555.752ENSEASG00005009372RPA19355.910Equus_asinus_asinus
ENSPREG00000010174rpa19555.360ENSECAG00000023886RPA19156.050Equus_caballus
ENSPREG00000010174rpa16361.658ENSEEUG00000002186-6361.658Erinaceus_europaeus
ENSPREG00000010174rpa18553.906ENSELUG00000006136RPA19553.906Esox_lucius
ENSPREG00000010174rpa19570.922ENSELUG00000021071rpa19371.048Esox_lucius
ENSPREG00000010174rpa19555.614ENSFCAG00000006306RPA19156.584Felis_catus
ENSPREG00000010174rpa19655.959ENSFALG00000006575RPA19455.959Ficedula_albicollis
ENSPREG00000010174rpa19556.162ENSFDAG00000007720RPA19256.162Fukomys_damarensis
ENSPREG00000010174rpa19581.673ENSFHEG00000003580rpa19381.818Fundulus_heteroclitus
ENSPREG00000010174rpa19667.321ENSGMOG00000010382rpa19367.921Gadus_morhua
ENSPREG00000010174rpa19655.286ENSGALG00000003072RPA19455.286Gallus_gallus
ENSPREG00000010174rpa19585.868ENSGAFG00000012916rpa19386.022Gambusia_affinis
ENSPREG00000010174rpa19951.477ENSGAFG00000020953RPA19652.707Gambusia_affinis
ENSPREG00000010174rpa19673.592ENSGACG00000010856rpa19473.592Gasterosteus_aculeatus
ENSPREG00000010174rpa19655.345ENSGAGG00000013611RPA19455.345Gopherus_agassizii
ENSPREG00000010174rpa19655.786ENSGGOG00000014186RPA19455.786Gorilla_gorilla
ENSPREG00000010174rpa19250.269ENSHBUG00000009348RPA19350.447Haplochromis_burtoni
ENSPREG00000010174rpa19578.929ENSHBUG00000017773rpa19379.070Haplochromis_burtoni
ENSPREG00000010174rpa19556.162ENSHGLG00000008846RPA19256.162Heterocephalus_glaber_female
ENSPREG00000010174rpa19550.000ENSHGLG00100002005-9650.000Heterocephalus_glaber_male
ENSPREG00000010174rpa19556.162ENSHGLG00100017755-9256.162Heterocephalus_glaber_male
ENSPREG00000010174rpa19652.496ENSHGLG00100000799-9452.496Heterocephalus_glaber_male
ENSPREG00000010174rpa19142.857ENSHCOG00000000351RPA18742.857Hippocampus_comes
ENSPREG00000010174rpa19567.250ENSHCOG00000001401rpa19367.368Hippocampus_comes
ENSPREG00000010174rpa19666.667ENSIPUG00000004400rpa19466.667Ictalurus_punctatus
ENSPREG00000010174rpa19452.900ENSSTOG00000022475RPA19352.900Ictidomys_tridecemlineatus
ENSPREG00000010174rpa19257.092ENSJJAG00000000876Rpa19357.092Jaculus_jaculus
ENSPREG00000010174rpa19954.576ENSKMAG00000000234RPA19754.576Kryptolebias_marmoratus
ENSPREG00000010174rpa19574.431ENSKMAG00000005605rpa19374.737Kryptolebias_marmoratus
ENSPREG00000010174rpa19574.778ENSLBEG00000021604rpa19374.911Labrus_bergylta
ENSPREG00000010174rpa19061.520ENSLBEG00000002281RPA17661.520Labrus_bergylta
ENSPREG00000010174rpa17556.044ENSLACG00000007210RPA19256.044Latimeria_chalumnae
ENSPREG00000010174rpa19663.492ENSLOCG00000006397rpa19364.362Lepisosteus_oculatus
ENSPREG00000010174rpa19655.214ENSLAFG00000015354RPA19355.214Loxodonta_africana
ENSPREG00000010174rpa18353.678ENSMFAG00000036138-9854.545Macaca_fascicularis
ENSPREG00000010174rpa19556.338ENSMMUG00000011604-9356.514Macaca_mulatta
ENSPREG00000010174rpa19651.468ENSMMUG00000002442-9451.468Macaca_mulatta
ENSPREG00000010174rpa18258.907ENSMNEG00000029837-9158.907Macaca_nemestrina
ENSPREG00000010174rpa19655.556ENSMNEG00000031632-9356.732Macaca_nemestrina
ENSPREG00000010174rpa19554.383ENSMLEG00000038768-9355.172Mandrillus_leucophaeus
ENSPREG00000010174rpa19577.143ENSMAMG00000017993rpa19377.281Mastacembelus_armatus
ENSPREG00000010174rpa18861.809ENSMAMG00000020097RPA17861.386Mastacembelus_armatus
ENSPREG00000010174rpa19655.519ENSMZEG00005024731RPA19455.519Maylandia_zebra
ENSPREG00000010174rpa19578.929ENSMZEG00005007551rpa19379.070Maylandia_zebra
ENSPREG00000010174rpa19555.417ENSMGAG00000005315RPA19255.282Meleagris_gallopavo
ENSPREG00000010174rpa19555.439ENSMAUG00000010474Rpa19555.888Mesocricetus_auratus
ENSPREG00000010174rpa19655.631ENSMICG00000012867RPA19455.973Microcebus_murinus
ENSPREG00000010174rpa19555.732ENSMOCG00000013019Rpa19255.732Microtus_ochrogaster
ENSPREG00000010174rpa19673.571ENSMMOG00000014292rpa19475.182Mola_mola
ENSPREG00000010174rpa19655.944ENSMMOG00000010868RPA19355.944Mola_mola
ENSPREG00000010174rpa19655.095ENSMODG00000010549RPA19455.095Monodelphis_domestica
ENSPREG00000010174rpa19062.621ENSMALG00000001208RPA18157.143Monopterus_albus
ENSPREG00000010174rpa19578.571ENSMALG00000011453rpa19579.228Monopterus_albus
ENSPREG00000010174rpa19555.439MGP_CAROLIEiJ_G0016734Rpa19255.439Mus_caroli
ENSPREG00000010174rpa19654.281ENSMUSG00000000751Rpa19354.281Mus_musculus
ENSPREG00000010174rpa19654.576MGP_PahariEiJ_G0017871Rpa19554.576Mus_pahari
ENSPREG00000010174rpa19654.188MGP_SPRETEiJ_G0017577Rpa19354.188Mus_spretus
ENSPREG00000010174rpa19655.631ENSMPUG00000013119RPA19455.631Mustela_putorius_furo
ENSPREG00000010174rpa19655.026ENSMLUG00000006113RPA19455.026Myotis_lucifugus
ENSPREG00000010174rpa19556.007ENSNGAG00000004522Rpa19056.007Nannospalax_galili
ENSPREG00000010174rpa19176.075ENSNBRG00000020595rpa19476.075Neolamprologus_brichardi
ENSPREG00000010174rpa18757.634ENSNBRG00000009672RPA18657.634Neolamprologus_brichardi
ENSPREG00000010174rpa19654.669ENSNLEG00000017149RPA19455.651Nomascus_leucogenys
ENSPREG00000010174rpa18471.875ENSMEUG00000006714RPA17471.875Notamacropus_eugenii
ENSPREG00000010174rpa19255.044ENSODEG00000009038RPA19155.044Octodon_degus
ENSPREG00000010174rpa19577.058ENSONIG00000013135rpa19377.193Oreochromis_niloticus
ENSPREG00000010174rpa19457.018ENSOANG00000010880RPA19457.018Ornithorhynchus_anatinus
ENSPREG00000010174rpa19652.769ENSOCUG00000001504RPA19552.769Oryctolagus_cuniculus
ENSPREG00000010174rpa19577.143ENSORLG00000004856rpa19377.281Oryzias_latipes
ENSPREG00000010174rpa19849.921ENSORLG00000003368RPA19650.000Oryzias_latipes
ENSPREG00000010174rpa19946.851ENSORLG00020015284RPA19746.851Oryzias_latipes_hni
ENSPREG00000010174rpa19577.321ENSORLG00020008980rpa19377.460Oryzias_latipes_hni
ENSPREG00000010174rpa16959.135ENSORLG00015005867-9559.135Oryzias_latipes_hsok
ENSPREG00000010174rpa19949.920ENSORLG00015020383RPA19749.920Oryzias_latipes_hsok
ENSPREG00000010174rpa19577.321ENSORLG00015013982rpa19377.460Oryzias_latipes_hsok
ENSPREG00000010174rpa19574.419ENSOMEG00000004704rpa19374.552Oryzias_melastigma
ENSPREG00000010174rpa19651.667ENSOMEG00000011040RPA19751.767Oryzias_melastigma
ENSPREG00000010174rpa19654.778ENSOGAG00000005581-9454.778Otolemur_garnettii
ENSPREG00000010174rpa17474.400ENSOGAG00000029379-8774.400Otolemur_garnettii
ENSPREG00000010174rpa19654.608ENSOARG00000014479RPA19454.623Ovis_aries
ENSPREG00000010174rpa19655.726ENSPPAG00000039680RPA19455.993Pan_paniscus
ENSPREG00000010174rpa19555.789ENSPPRG00000011807RPA19156.762Panthera_pardus
ENSPREG00000010174rpa19555.789ENSPTIG00000007898RPA19156.762Panthera_tigris_altaica
ENSPREG00000010174rpa19655.897ENSPTRG00000008539RPA19456.164Pan_troglodytes
ENSPREG00000010174rpa19655.556ENSPANG00000024592RPA19455.726Papio_anubis
ENSPREG00000010174rpa19668.000ENSPKIG00000008053rpa19468.348Paramormyrops_kingsleyae
ENSPREG00000010174rpa19556.814ENSPSIG00000015617RPA19357.348Pelodiscus_sinensis
ENSPREG00000010174rpa19670.916ENSPMGG00000011589rpa19370.916Periophthalmus_magnuspinnatus
ENSPREG00000010174rpa19951.877ENSPMGG00000000543RPA19655.185Periophthalmus_magnuspinnatus
ENSPREG00000010174rpa19655.802ENSPEMG00000021061Rpa19555.802Peromyscus_maniculatus_bairdii
ENSPREG00000010174rpa19654.483ENSPCIG00000019049RPA19354.561Phascolarctos_cinereus
ENSPREG00000010174rpa19588.372ENSPFOG00000003987rpa19388.372Poecilia_formosa
ENSPREG00000010174rpa19752.404ENSPLAG00000008844-9653.770Poecilia_latipinna
ENSPREG00000010174rpa19588.193ENSPLAG00000004984rpa19388.193Poecilia_latipinna
ENSPREG00000010174rpa19588.551ENSPMEG00000020602rpa19388.551Poecilia_mexicana
ENSPREG00000010174rpa19752.077ENSPMEG00000003627-9752.404Poecilia_mexicana
ENSPREG00000010174rpa19655.461ENSPCOG00000001799RPA19455.461Propithecus_coquereli
ENSPREG00000010174rpa19555.536ENSPVAG00000002149RPA19156.150Pteropus_vampyrus
ENSPREG00000010174rpa19655.354ENSPNYG00000024165RPA19455.354Pundamilia_nyererei
ENSPREG00000010174rpa19578.929ENSPNYG00000016316rpa19379.070Pundamilia_nyererei
ENSPREG00000010174rpa18580.597ENSPNAG00000008599rpa19362.271Pygocentrus_nattereri
ENSPREG00000010174rpa19556.997ENSRNOG00000003123Rpa19256.085Rattus_norvegicus
ENSPREG00000010174rpa19655.308ENSRBIG00000036587RPA19455.308Rhinopithecus_bieti
ENSPREG00000010174rpa19650.514ENSRROG00000043278RPA19450.514Rhinopithecus_roxellana
ENSPREG00000010174rpa18657.386ENSSBOG00000030233RPA19158.034Saimiri_boliviensis_boliviensis
ENSPREG00000010174rpa19555.106ENSSHAG00000007969RPA19155.986Sarcophilus_harrisii
ENSPREG00000010174rpa19570.213ENSSFOG00015005362rpa19070.337Scleropages_formosus
ENSPREG00000010174rpa18861.275ENSSMAG00000019746RPA17961.275Scophthalmus_maximus
ENSPREG00000010174rpa18863.910ENSSDUG00000016358RPA17863.861Seriola_dumerili
ENSPREG00000010174rpa19577.679ENSSDUG00000011949rpa19377.818Seriola_dumerili
ENSPREG00000010174rpa19577.857ENSSLDG00000011806rpa19377.996Seriola_lalandi_dorsalis
ENSPREG00000010174rpa18863.409ENSSLDG00000020784RPA17763.366Seriola_lalandi_dorsalis
ENSPREG00000010174rpa18352.894ENSSARG00000007506RPA18352.883Sorex_araneus
ENSPREG00000010174rpa19555.595ENSSPUG00000007223RPA19256.655Sphenodon_punctatus
ENSPREG00000010174rpa19957.143ENSSPAG00000011165RPA19657.143Stegastes_partitus
ENSPREG00000010174rpa19578.036ENSSPAG00000009903rpa19378.175Stegastes_partitus
ENSPREG00000010174rpa19654.577ENSSSCG00000017822RPA19455.888Sus_scrofa
ENSPREG00000010174rpa19655.729ENSTGUG00000005775RPA19455.729Taeniopygia_guttata
ENSPREG00000010174rpa19572.679ENSTRUG00000003616rpa19372.809Takifugu_rubripes
ENSPREG00000010174rpa19462.720ENSTRUG00000000405RPA18162.195Takifugu_rubripes
ENSPREG00000010174rpa19575.176ENSTNIG00000016199rpa19375.309Tetraodon_nigroviridis
ENSPREG00000010174rpa16761.179ENSTBEG00000002709RPA16861.179Tupaia_belangeri
ENSPREG00000010174rpa19654.003ENSTTRG00000001169RPA19454.281Tursiops_truncatus
ENSPREG00000010174rpa18974.737ENSUAMG00000015676RPA19567.391Ursus_americanus
ENSPREG00000010174rpa19555.755ENSUMAG00000009328RPA19156.708Ursus_maritimus
ENSPREG00000010174rpa19653.608ENSVPAG00000009443RPA19453.608Vicugna_pacos
ENSPREG00000010174rpa19654.623ENSVVUG00000021715RPA19454.623Vulpes_vulpes
ENSPREG00000010174rpa19658.448ENSXETG00000013538rpa19259.964Xenopus_tropicalis
ENSPREG00000010174rpa19984.509ENSXCOG00000010068rpa19984.509Xiphophorus_couchianus
ENSPREG00000010174rpa19555.117ENSXCOG00000009899-9755.296Xiphophorus_couchianus
ENSPREG00000010174rpa19160.952ENSXMAG00000010333RPA18260.952Xiphophorus_maculatus
ENSPREG00000010174rpa19585.868ENSXMAG00000004102rpa19485.905Xiphophorus_maculatus

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