EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010206 (Gene tree)
Gene ID: 103482287
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14207 bases
Position: chrLG20:3657836-3672042
Accession: 103482287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015114	RRM_1	PF00076.22	7.3e-15	1	2
ENSPREP00000015114	RRM_1	PF00076.22	7.3e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015270	-	1560	XM_008438349	ENSPREP00000015114	506 (aa)	XP_008436571	UPI0007EA3EE8

Gene Model

Click here to download ENSPREG00000010206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010206	rnpc3	97	53.012	ENSG00000185946	RNPC3	96	55.639	Homo_sapiens
ENSPREG00000010206	rnpc3	100	79.724	ENSAPOG00000017371	rnpc3	100	79.528	Acanthochromis_polyacanthus
ENSPREG00000010206	rnpc3	99	52.632	ENSAMEG00000001694	RNPC3	95	53.187	Ailuropoda_melanoleuca
ENSPREG00000010206	rnpc3	99	75.835	ENSACIG00000021043	rnpc3	99	76.031	Amphilophus_citrinellus
ENSPREG00000010206	rnpc3	100	79.843	ENSAOCG00000014052	rnpc3	98	79.843	Amphiprion_ocellaris
ENSPREG00000010206	rnpc3	100	79.648	ENSAPEG00000008739	rnpc3	98	79.648	Amphiprion_percula
ENSPREG00000010206	rnpc3	100	77.326	ENSATEG00000021263	rnpc3	100	77.326	Anabas_testudineus
ENSPREG00000010206	rnpc3	89	54.825	ENSAPLG00000015605	RNPC3	99	53.947	Anas_platyrhynchos
ENSPREG00000010206	rnpc3	96	54.192	ENSACAG00000002029	RNPC3	96	51.904	Anolis_carolinensis
ENSPREG00000010206	rnpc3	97	52.705	ENSANAG00000019950	RNPC3	96	52.590	Aotus_nancymaae
ENSPREG00000010206	rnpc3	99	79.208	ENSACLG00000014702	rnpc3	99	79.208	Astatotilapia_calliptera
ENSPREG00000010206	rnpc3	99	62.840	ENSAMXG00000033372	rnpc3	99	62.818	Astyanax_mexicanus
ENSPREG00000010206	rnpc3	97	53.614	ENSBTAG00000019091	RNPC3	96	53.493	Bos_taurus
ENSPREG00000010206	rnpc3	97	52.305	ENSCJAG00000035686	RNPC3	96	51.896	Callithrix_jacchus
ENSPREG00000010206	rnpc3	99	52.539	ENSCAFG00000019972	RNPC3	96	53.094	Canis_familiaris
ENSPREG00000010206	rnpc3	99	52.539	ENSCAFG00020011300	RNPC3	96	53.094	Canis_lupus_dingo
ENSPREG00000010206	rnpc3	99	53.089	ENSCHIG00000020361	RNPC3	96	52.767	Capra_hircus
ENSPREG00000010206	rnpc3	97	53.106	ENSTSYG00000030256	RNPC3	96	52.988	Carlito_syrichta
ENSPREG00000010206	rnpc3	86	43.439	ENSCAPG00000013600	RNPC3	97	43.578	Cavia_aperea
ENSPREG00000010206	rnpc3	97	51.503	ENSCPOG00000031638	RNPC3	96	51.697	Cavia_porcellus
ENSPREG00000010206	rnpc3	97	52.505	ENSCCAG00000024301	RNPC3	96	52.390	Cebus_capucinus
ENSPREG00000010206	rnpc3	97	52.906	ENSCATG00000002086	RNPC3	96	52.789	Cercocebus_atys
ENSPREG00000010206	rnpc3	97	40.481	ENSCATG00000035930	-	52	46.531	Cercocebus_atys
ENSPREG00000010206	rnpc3	97	50.680	ENSCLAG00000005169	RNPC3	96	50.895	Chinchilla_lanigera
ENSPREG00000010206	rnpc3	97	52.906	ENSCSAG00000001519	RNPC3	96	52.579	Chlorocebus_sabaeus
ENSPREG00000010206	rnpc3	97	55.711	ENSCPBG00000028311	RNPC3	95	55.578	Chrysemys_picta_bellii
ENSPREG00000010206	rnpc3	94	36.495	ENSCSAVG00000002800	-	76	54.264	Ciona_savignyi
ENSPREG00000010206	rnpc3	97	52.505	ENSCANG00000031444	RNPC3	96	52.390	Colobus_angolensis_palliatus
ENSPREG00000010206	rnpc3	96	53.831	ENSCGRG00001019276	Rnpc3	95	53.427	Cricetulus_griseus_chok1gshd
ENSPREG00000010206	rnpc3	89	51.747	ENSCGRG00000000053	Rnpc3	99	51.310	Cricetulus_griseus_crigri
ENSPREG00000010206	rnpc3	99	72.817	ENSCSEG00000013475	rnpc3	99	72.619	Cynoglossus_semilaevis
ENSPREG00000010206	rnpc3	100	84.961	ENSCVAG00000002645	rnpc3	100	84.961	Cyprinodon_variegatus
ENSPREG00000010206	rnpc3	99	62.919	ENSDARG00000011247	rnpc3	94	68.571	Danio_rerio
ENSPREG00000010206	rnpc3	97	53.012	ENSDNOG00000047498	-	95	53.012	Dasypus_novemcinctus
ENSPREG00000010206	rnpc3	97	52.410	ENSDNOG00000044555	-	95	52.410	Dasypus_novemcinctus
ENSPREG00000010206	rnpc3	98	52.087	ENSDORG00000027343	Rnpc3	96	51.889	Dipodomys_ordii
ENSPREG00000010206	rnpc3	96	50.491	ENSEBUG00000002068	rnpc3	96	50.197	Eptatretus_burgeri
ENSPREG00000010206	rnpc3	99	53.295	ENSEASG00005015957	RNPC3	96	53.465	Equus_asinus_asinus
ENSPREG00000010206	rnpc3	99	53.295	ENSECAG00000021148	RNPC3	96	53.465	Equus_caballus
ENSPREG00000010206	rnpc3	99	67.366	ENSELUG00000002264	rnpc3	98	65.058	Esox_lucius
ENSPREG00000010206	rnpc3	98	53.400	ENSFCAG00000024312	RNPC3	96	53.400	Felis_catus
ENSPREG00000010206	rnpc3	89	55.044	ENSFALG00000002580	RNPC3	99	53.774	Ficedula_albicollis
ENSPREG00000010206	rnpc3	97	52.705	ENSFDAG00000019948	RNPC3	96	52.590	Fukomys_damarensis
ENSPREG00000010206	rnpc3	100	78.261	ENSFHEG00000020647	rnpc3	100	78.063	Fundulus_heteroclitus
ENSPREG00000010206	rnpc3	100	67.059	ENSGMOG00000019213	rnpc3	99	66.601	Gadus_morhua
ENSPREG00000010206	rnpc3	96	55.870	ENSGALG00000005162	RNPC3	88	55.040	Gallus_gallus
ENSPREG00000010206	rnpc3	100	93.307	ENSGAFG00000017236	rnpc3	100	93.307	Gambusia_affinis
ENSPREG00000010206	rnpc3	100	76.378	ENSGACG00000002048	rnpc3	99	76.505	Gasterosteus_aculeatus
ENSPREG00000010206	rnpc3	97	56.313	ENSGAGG00000008438	RNPC3	94	55.936	Gopherus_agassizii
ENSPREG00000010206	rnpc3	97	47.571	ENSGGOG00000026201	-	95	47.166	Gorilla_gorilla
ENSPREG00000010206	rnpc3	83	76.280	ENSHBUG00000015966	rnpc3	85	77.628	Haplochromis_burtoni
ENSPREG00000010206	rnpc3	97	52.104	ENSHGLG00000001708	RNPC3	96	51.992	Heterocephalus_glaber_female
ENSPREG00000010206	rnpc3	97	52.104	ENSHGLG00100003005	RNPC3	96	51.992	Heterocephalus_glaber_male
ENSPREG00000010206	rnpc3	99	74.606	ENSHCOG00000017135	rnpc3	100	74.606	Hippocampus_comes
ENSPREG00000010206	rnpc3	99	61.373	ENSIPUG00000002916	rnpc3	99	62.008	Ictalurus_punctatus
ENSPREG00000010206	rnpc3	97	52.000	ENSSTOG00000025020	RNPC3	96	51.889	Ictidomys_tridecemlineatus
ENSPREG00000010206	rnpc3	96	52.113	ENSJJAG00000010203	Rnpc3	96	51.690	Jaculus_jaculus
ENSPREG00000010206	rnpc3	99	79.920	ENSKMAG00000017358	rnpc3	99	79.523	Kryptolebias_marmoratus
ENSPREG00000010206	rnpc3	100	78.740	ENSLBEG00000024901	rnpc3	98	78.740	Labrus_bergylta
ENSPREG00000010206	rnpc3	97	57.430	ENSLACG00000005720	RNPC3	90	54.851	Latimeria_chalumnae
ENSPREG00000010206	rnpc3	98	61.723	ENSLOCG00000007986	rnpc3	98	58.918	Lepisosteus_oculatus
ENSPREG00000010206	rnpc3	97	53.213	ENSLAFG00000032342	RNPC3	96	52.673	Loxodonta_africana
ENSPREG00000010206	rnpc3	97	52.906	ENSMFAG00000002004	RNPC3	96	52.789	Macaca_fascicularis
ENSPREG00000010206	rnpc3	97	40.323	ENSMFAG00000002917	-	54	47.368	Macaca_fascicularis
ENSPREG00000010206	rnpc3	97	52.705	ENSMMUG00000018039	RNPC3	96	52.590	Macaca_mulatta
ENSPREG00000010206	rnpc3	79	49.537	ENSMMUG00000002098	-	85	49.537	Macaca_mulatta
ENSPREG00000010206	rnpc3	97	49.900	ENSMNEG00000033950	RNPC3	95	49.801	Macaca_nemestrina
ENSPREG00000010206	rnpc3	97	40.196	ENSMLEG00000034644	-	95	40.237	Mandrillus_leucophaeus
ENSPREG00000010206	rnpc3	97	52.906	ENSMLEG00000033628	RNPC3	96	52.789	Mandrillus_leucophaeus
ENSPREG00000010206	rnpc3	100	69.112	ENSMAMG00000007496	rnpc3	100	68.919	Mastacembelus_armatus
ENSPREG00000010206	rnpc3	99	78.794	ENSMZEG00005020233	rnpc3	99	78.794	Maylandia_zebra
ENSPREG00000010206	rnpc3	89	54.167	ENSMGAG00000006381	RNPC3	99	54.167	Meleagris_gallopavo
ENSPREG00000010206	rnpc3	97	54.418	ENSMAUG00000001358	Rnpc3	96	53.892	Mesocricetus_auratus
ENSPREG00000010206	rnpc3	97	52.505	ENSMICG00000029591	RNPC3	96	52.390	Microcebus_murinus
ENSPREG00000010206	rnpc3	97	54.108	ENSMOCG00000013423	Rnpc3	96	53.586	Microtus_ochrogaster
ENSPREG00000010206	rnpc3	100	71.203	ENSMMOG00000005309	rnpc3	100	72.189	Mola_mola
ENSPREG00000010206	rnpc3	97	53.307	ENSMODG00000002946	RNPC3	95	53.320	Monodelphis_domestica
ENSPREG00000010206	rnpc3	98	72.655	ENSMALG00000015471	rnpc3	98	72.655	Monopterus_albus
ENSPREG00000010206	rnpc3	97	53.924	MGP_CAROLIEiJ_G0025555	Rnpc3	97	53.175	Mus_caroli
ENSPREG00000010206	rnpc3	97	53.507	ENSMUSG00000027981	Rnpc3	99	51.266	Mus_musculus
ENSPREG00000010206	rnpc3	98	53.386	MGP_PahariEiJ_G0027001	Rnpc3	97	52.767	Mus_pahari
ENSPREG00000010206	rnpc3	97	50.485	MGP_SPRETEiJ_G0026505	Rnpc3	97	52.767	Mus_spretus
ENSPREG00000010206	rnpc3	99	52.446	ENSMPUG00000007349	RNPC3	96	53.000	Mustela_putorius_furo
ENSPREG00000010206	rnpc3	97	54.343	ENSMLUG00000028743	RNPC3	96	54.217	Myotis_lucifugus
ENSPREG00000010206	rnpc3	97	53.213	ENSNGAG00000010939	Rnpc3	96	53.094	Nannospalax_galili
ENSPREG00000010206	rnpc3	99	79.406	ENSNBRG00000012196	rnpc3	96	79.406	Neolamprologus_brichardi
ENSPREG00000010206	rnpc3	97	53.213	ENSNLEG00000012013	RNPC3	96	53.094	Nomascus_leucogenys
ENSPREG00000010206	rnpc3	97	52.121	ENSODEG00000007612	RNPC3	96	52.008	Octodon_degus
ENSPREG00000010206	rnpc3	99	79.921	ENSONIG00000004770	rnpc3	100	81.098	Oreochromis_niloticus
ENSPREG00000010206	rnpc3	92	54.274	ENSOANG00000008220	RNPC3	99	52.778	Ornithorhynchus_anatinus
ENSPREG00000010206	rnpc3	97	52.800	ENSOCUG00000004016	RNPC3	96	52.381	Oryctolagus_cuniculus
ENSPREG00000010206	rnpc3	100	78.346	ENSORLG00000005694	rnpc3	100	77.953	Oryzias_latipes
ENSPREG00000010206	rnpc3	100	78.543	ENSORLG00020005513	rnpc3	100	78.150	Oryzias_latipes_hni
ENSPREG00000010206	rnpc3	100	78.346	ENSORLG00015002179	rnpc3	100	77.953	Oryzias_latipes_hsok
ENSPREG00000010206	rnpc3	100	78.740	ENSOMEG00000017737	rnpc3	100	78.543	Oryzias_melastigma
ENSPREG00000010206	rnpc3	98	53.280	ENSOGAG00000026182	RNPC3	96	53.082	Otolemur_garnettii
ENSPREG00000010206	rnpc3	99	53.089	ENSOARG00000018719	RNPC3	96	52.767	Ovis_aries
ENSPREG00000010206	rnpc3	97	47.686	ENSPPAG00000030278	-	97	47.189	Pan_paniscus
ENSPREG00000010206	rnpc3	97	52.800	ENSPPAG00000037459	RNPC3	96	52.684	Pan_paniscus
ENSPREG00000010206	rnpc3	98	53.400	ENSPPRG00000020246	RNPC3	96	53.400	Panthera_pardus
ENSPREG00000010206	rnpc3	98	53.400	ENSPTIG00000009887	RNPC3	97	53.400	Panthera_tigris_altaica
ENSPREG00000010206	rnpc3	96	47.433	ENSPTRG00000044227	-	97	46.761	Pan_troglodytes
ENSPREG00000010206	rnpc3	97	52.705	ENSPTRG00000033902	RNPC3	96	52.590	Pan_troglodytes
ENSPREG00000010206	rnpc3	97	41.980	ENSPANG00000029957	-	51	46.559	Papio_anubis
ENSPREG00000010206	rnpc3	97	53.012	ENSPANG00000012137	RNPC3	96	52.894	Papio_anubis
ENSPREG00000010206	rnpc3	98	64.343	ENSPKIG00000008828	rnpc3	98	61.144	Paramormyrops_kingsleyae
ENSPREG00000010206	rnpc3	65	52.252	ENSPSIG00000007396	RNPC3	99	51.622	Pelodiscus_sinensis
ENSPREG00000010206	rnpc3	99	65.029	ENSPMGG00000011742	rnpc3	99	64.833	Periophthalmus_magnuspinnatus
ENSPREG00000010206	rnpc3	92	50.743	ENSPEMG00000020112	Rnpc3	99	52.070	Peromyscus_maniculatus_bairdii
ENSPREG00000010206	rnpc3	97	54.016	ENSPCIG00000004415	-	95	53.924	Phascolarctos_cinereus
ENSPREG00000010206	rnpc3	100	98.028	ENSPFOG00000009895	rnpc3	100	98.028	Poecilia_formosa
ENSPREG00000010206	rnpc3	100	97.436	ENSPLAG00000012023	rnpc3	100	97.436	Poecilia_latipinna
ENSPREG00000010206	rnpc3	100	98.225	ENSPMEG00000003663	rnpc3	100	98.225	Poecilia_mexicana
ENSPREG00000010206	rnpc3	81	49.043	ENSPPYG00000001102	RNPC3	95	48.235	Pongo_abelii
ENSPREG00000010206	rnpc3	99	79.010	ENSPNYG00000020603	rnpc3	99	79.010	Pundamilia_nyererei
ENSPREG00000010206	rnpc3	97	53.908	ENSRNOG00000017310	Rnpc3	96	53.386	Rattus_norvegicus
ENSPREG00000010206	rnpc3	97	49.200	ENSRBIG00000043897	RNPC3	95	49.105	Rhinopithecus_bieti
ENSPREG00000010206	rnpc3	97	52.906	ENSRROG00000032334	RNPC3	96	52.789	Rhinopithecus_roxellana
ENSPREG00000010206	rnpc3	98	52.495	ENSSBOG00000024473	RNPC3	96	52.495	Saimiri_boliviensis_boliviensis
ENSPREG00000010206	rnpc3	97	53.414	ENSSHAG00000011859	RNPC3	95	53.414	Sarcophilus_harrisii
ENSPREG00000010206	rnpc3	99	65.820	ENSSFOG00015013055	rnpc3	99	65.820	Scleropages_formosus
ENSPREG00000010206	rnpc3	100	76.117	ENSSMAG00000020346	rnpc3	100	72.816	Scophthalmus_maximus
ENSPREG00000010206	rnpc3	100	77.388	ENSSDUG00000006600	rnpc3	100	77.388	Seriola_dumerili
ENSPREG00000010206	rnpc3	100	77.388	ENSSLDG00000007979	rnpc3	100	77.388	Seriola_lalandi_dorsalis
ENSPREG00000010206	rnpc3	95	56.823	ENSSPUG00000008539	-	92	55.936	Sphenodon_punctatus
ENSPREG00000010206	rnpc3	97	52.314	ENSSPUG00000003872	-	92	52.314	Sphenodon_punctatus
ENSPREG00000010206	rnpc3	100	80.040	ENSSPAG00000005633	rnpc3	100	79.842	Stegastes_partitus
ENSPREG00000010206	rnpc3	99	51.044	ENSSSCG00000037254	RNPC3	96	51.594	Sus_scrofa
ENSPREG00000010206	rnpc3	89	56.044	ENSTGUG00000004795	-	99	54.267	Taeniopygia_guttata
ENSPREG00000010206	rnpc3	99	73.477	ENSTNIG00000018963	rnpc3	100	73.477	Tetraodon_nigroviridis
ENSPREG00000010206	rnpc3	99	52.242	ENSUMAG00000007775	RNPC3	97	52.883	Ursus_maritimus
ENSPREG00000010206	rnpc3	99	52.539	ENSVVUG00000000331	RNPC3	96	53.094	Vulpes_vulpes
ENSPREG00000010206	rnpc3	98	42.913	ENSXETG00000025027	rnpc3	97	42.659	Xenopus_tropicalis
ENSPREG00000010206	rnpc3	100	90.522	ENSXCOG00000005013	rnpc3	100	91.683	Xiphophorus_couchianus
ENSPREG00000010206	rnpc3	100	95.276	ENSXMAG00000006495	rnpc3	100	95.276	Xiphophorus_maculatus