EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010236 (Gene tree)
Gene ID: 103481838
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 11869 bases
Position: chrLG19:15931897-15943765
Accession: 103481838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015177	AD	PF09793.9	4.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015333	-	543	XM_008437601	ENSPREP00000015177	180 (aa)	XP_008435823	-

Gene Model

Click here to download ENSPREG00000010236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010236	lsm12b	95	85.380	ENSG00000161654	LSM12	88	85.380	Homo_sapiens
ENSPREG00000010236	lsm12b	95	98.246	ENSAPOG00000007907	lsm12b	87	98.246	Acanthochromis_polyacanthus
ENSPREG00000010236	lsm12b	95	83.333	ENSAMEG00000018321	LSM12	88	83.333	Ailuropoda_melanoleuca
ENSPREG00000010236	lsm12b	95	97.076	ENSACIG00000008538	lsm12b	87	97.076	Amphilophus_citrinellus
ENSPREG00000010236	lsm12b	95	98.246	ENSAOCG00000021847	lsm12b	76	98.246	Amphiprion_ocellaris
ENSPREG00000010236	lsm12b	95	98.246	ENSAPEG00000002252	lsm12b	87	98.246	Amphiprion_percula
ENSPREG00000010236	lsm12b	95	96.491	ENSATEG00000005705	lsm12b	87	96.491	Anabas_testudineus
ENSPREG00000010236	lsm12b	95	85.380	ENSACAG00000004618	LSM12	88	85.380	Anolis_carolinensis
ENSPREG00000010236	lsm12b	95	85.380	ENSANAG00000029011	LSM12	88	85.380	Aotus_nancymaae
ENSPREG00000010236	lsm12b	95	97.661	ENSACLG00000026332	lsm12b	87	97.661	Astatotilapia_calliptera
ENSPREG00000010236	lsm12b	95	86.550	ENSAMXG00000036117	lsm12a	80	86.550	Astyanax_mexicanus
ENSPREG00000010236	lsm12b	95	92.982	ENSAMXG00000032952	lsm12b	87	92.982	Astyanax_mexicanus
ENSPREG00000010236	lsm12b	95	85.380	ENSBTAG00000016252	LSM12	88	85.380	Bos_taurus
ENSPREG00000010236	lsm12b	95	85.380	ENSCJAG00000048480	LSM12	88	85.380	Callithrix_jacchus
ENSPREG00000010236	lsm12b	95	85.380	ENSCAFG00000014379	LSM12	80	85.380	Canis_familiaris
ENSPREG00000010236	lsm12b	95	85.380	ENSCAFG00020012173	LSM12	88	85.380	Canis_lupus_dingo
ENSPREG00000010236	lsm12b	95	85.380	ENSCHIG00000018175	LSM12	88	85.380	Capra_hircus
ENSPREG00000010236	lsm12b	95	85.380	ENSTSYG00000036361	LSM12	88	85.380	Carlito_syrichta
ENSPREG00000010236	lsm12b	90	80.247	ENSCAPG00000009647	LSM12	89	80.247	Cavia_aperea
ENSPREG00000010236	lsm12b	95	84.211	ENSCPOG00000012860	LSM12	88	84.211	Cavia_porcellus
ENSPREG00000010236	lsm12b	95	85.380	ENSCCAG00000032905	LSM12	88	85.380	Cebus_capucinus
ENSPREG00000010236	lsm12b	95	85.380	ENSCATG00000030577	-	88	85.380	Cercocebus_atys
ENSPREG00000010236	lsm12b	95	84.795	ENSCLAG00000015759	LSM12	88	84.795	Chinchilla_lanigera
ENSPREG00000010236	lsm12b	95	85.965	ENSCSAG00000003486	LSM12	88	85.965	Chlorocebus_sabaeus
ENSPREG00000010236	lsm12b	61	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSPREG00000010236	lsm12b	95	86.550	ENSCPBG00000027105	LSM12	88	86.550	Chrysemys_picta_bellii
ENSPREG00000010236	lsm12b	95	85.380	ENSCANG00000043328	LSM12	88	85.380	Colobus_angolensis_palliatus
ENSPREG00000010236	lsm12b	95	85.380	ENSCGRG00001002094	Lsm12	88	85.380	Cricetulus_griseus_chok1gshd
ENSPREG00000010236	lsm12b	93	78.571	ENSCGRG00000004316	Lsm12	95	78.571	Cricetulus_griseus_crigri
ENSPREG00000010236	lsm12b	95	97.076	ENSCSEG00000008434	lsm12b	87	97.076	Cynoglossus_semilaevis
ENSPREG00000010236	lsm12b	95	99.415	ENSCVAG00000008755	lsm12b	87	99.415	Cyprinodon_variegatus
ENSPREG00000010236	lsm12b	95	93.567	ENSDARG00000109510	lsm12b	87	93.567	Danio_rerio
ENSPREG00000010236	lsm12b	95	84.795	ENSDARG00000028848	lsm12a	87	84.795	Danio_rerio
ENSPREG00000010236	lsm12b	95	85.380	ENSDNOG00000002418	LSM12	80	85.380	Dasypus_novemcinctus
ENSPREG00000010236	lsm12b	95	85.380	ENSDORG00000016381	Lsm12	88	85.380	Dipodomys_ordii
ENSPREG00000010236	lsm12b	71	30.282	FBgn0036057	CG14164	75	30.282	Drosophila_melanogaster
ENSPREG00000010236	lsm12b	81	32.000	FBgn0030364	Lsm12	69	32.000	Drosophila_melanogaster
ENSPREG00000010236	lsm12b	95	76.023	ENSETEG00000011012	-	98	76.023	Echinops_telfairi
ENSPREG00000010236	lsm12b	95	84.795	ENSETEG00000008374	LSM12	88	84.795	Echinops_telfairi
ENSPREG00000010236	lsm12b	79	65.493	ENSEBUG00000016299	lsm12a	79	65.493	Eptatretus_burgeri
ENSPREG00000010236	lsm12b	95	85.380	ENSEASG00005010155	LSM12	88	85.380	Equus_asinus_asinus
ENSPREG00000010236	lsm12b	95	85.380	ENSECAG00000009071	LSM12	88	85.380	Equus_caballus
ENSPREG00000010236	lsm12b	85	84.314	ENSEEUG00000002419	-	100	84.314	Erinaceus_europaeus
ENSPREG00000010236	lsm12b	95	94.152	ENSELUG00000015538	lsm12b	87	88.889	Esox_lucius
ENSPREG00000010236	lsm12b	95	91.813	ENSELUG00000000256	-	87	91.813	Esox_lucius
ENSPREG00000010236	lsm12b	95	85.380	ENSFCAG00000037021	LSM12	88	85.380	Felis_catus
ENSPREG00000010236	lsm12b	87	80.769	ENSFDAG00000008954	LSM12	91	80.769	Fukomys_damarensis
ENSPREG00000010236	lsm12b	95	98.830	ENSFHEG00000019913	lsm12b	87	98.830	Fundulus_heteroclitus
ENSPREG00000010236	lsm12b	88	96.835	ENSGMOG00000015449	lsm12b	100	96.835	Gadus_morhua
ENSPREG00000010236	lsm12b	85	84.967	ENSGALG00000039803	LSM12	100	84.967	Gallus_gallus
ENSPREG00000010236	lsm12b	95	100.000	ENSGAFG00000011829	lsm12b	87	100.000	Gambusia_affinis
ENSPREG00000010236	lsm12b	88	97.468	ENSGACG00000003428	lsm12b	100	97.468	Gasterosteus_aculeatus
ENSPREG00000010236	lsm12b	95	85.380	ENSGAGG00000021965	LSM12	88	85.380	Gopherus_agassizii
ENSPREG00000010236	lsm12b	95	85.380	ENSGGOG00000010589	-	88	85.380	Gorilla_gorilla
ENSPREG00000010236	lsm12b	86	96.753	ENSHBUG00000007667	lsm12b	68	96.753	Haplochromis_burtoni
ENSPREG00000010236	lsm12b	95	85.380	ENSHGLG00000011411	LSM12	88	85.380	Heterocephalus_glaber_female
ENSPREG00000010236	lsm12b	96	77.326	ENSHGLG00100000241	LSM12	89	77.326	Heterocephalus_glaber_male
ENSPREG00000010236	lsm12b	95	95.322	ENSHCOG00000002094	lsm12b	87	95.322	Hippocampus_comes
ENSPREG00000010236	lsm12b	94	83.432	ENSIPUG00000008936	lsm12a	86	83.432	Ictalurus_punctatus
ENSPREG00000010236	lsm12b	95	92.398	ENSIPUG00000014800	lsm12	87	92.398	Ictalurus_punctatus
ENSPREG00000010236	lsm12b	95	85.380	ENSSTOG00000007403	LSM12	88	85.380	Ictidomys_tridecemlineatus
ENSPREG00000010236	lsm12b	95	84.211	ENSJJAG00000004364	-	88	84.211	Jaculus_jaculus
ENSPREG00000010236	lsm12b	95	76.163	ENSJJAG00000011793	-	90	76.163	Jaculus_jaculus
ENSPREG00000010236	lsm12b	78	75.887	ENSJJAG00000014652	-	84	75.887	Jaculus_jaculus
ENSPREG00000010236	lsm12b	95	97.661	ENSLBEG00000027999	lsm12b	87	97.661	Labrus_bergylta
ENSPREG00000010236	lsm12b	95	87.135	ENSLACG00000015981	LSM12	88	87.135	Latimeria_chalumnae
ENSPREG00000010236	lsm12b	95	91.228	ENSLOCG00000013079	lsm12b	87	91.228	Lepisosteus_oculatus
ENSPREG00000010236	lsm12b	95	85.380	ENSLAFG00000005202	LSM12	88	85.380	Loxodonta_africana
ENSPREG00000010236	lsm12b	95	85.380	ENSMFAG00000031376	LSM12	88	85.380	Macaca_fascicularis
ENSPREG00000010236	lsm12b	95	85.380	ENSMMUG00000006804	LSM12	88	85.380	Macaca_mulatta
ENSPREG00000010236	lsm12b	95	85.380	ENSMNEG00000030594	-	88	85.380	Macaca_nemestrina
ENSPREG00000010236	lsm12b	95	85.380	ENSMLEG00000039934	LSM12	88	85.380	Mandrillus_leucophaeus
ENSPREG00000010236	lsm12b	95	97.661	ENSMAMG00000004279	lsm12b	87	97.661	Mastacembelus_armatus
ENSPREG00000010236	lsm12b	95	97.661	ENSMZEG00005005754	lsm12b	87	97.661	Maylandia_zebra
ENSPREG00000010236	lsm12b	95	85.965	ENSMICG00000037219	LSM12	88	85.965	Microcebus_murinus
ENSPREG00000010236	lsm12b	95	71.930	ENSMOCG00000017015	-	75	71.930	Microtus_ochrogaster
ENSPREG00000010236	lsm12b	95	85.380	ENSMOCG00000019878	-	88	85.380	Microtus_ochrogaster
ENSPREG00000010236	lsm12b	95	97.661	ENSMMOG00000020848	lsm12b	87	97.661	Mola_mola
ENSPREG00000010236	lsm12b	95	98.246	ENSMALG00000007578	lsm12b	87	98.246	Monopterus_albus
ENSPREG00000010236	lsm12b	95	84.795	MGP_CAROLIEiJ_G0017241	Lsm12	88	84.795	Mus_caroli
ENSPREG00000010236	lsm12b	95	85.380	ENSMUSG00000020922	Lsm12	88	85.380	Mus_musculus
ENSPREG00000010236	lsm12b	95	77.660	MGP_PahariEiJ_G0018371	Lsm12	89	77.660	Mus_pahari
ENSPREG00000010236	lsm12b	95	84.795	MGP_SPRETEiJ_G0018084	Lsm12	88	84.795	Mus_spretus
ENSPREG00000010236	lsm12b	95	85.965	ENSMLUG00000006391	LSM12	88	85.965	Myotis_lucifugus
ENSPREG00000010236	lsm12b	95	85.380	ENSNGAG00000001870	Lsm12	88	85.380	Nannospalax_galili
ENSPREG00000010236	lsm12b	95	63.483	ENSNGAG00000015429	-	91	63.483	Nannospalax_galili
ENSPREG00000010236	lsm12b	95	97.661	ENSNBRG00000006266	lsm12b	87	97.661	Neolamprologus_brichardi
ENSPREG00000010236	lsm12b	95	85.380	ENSNLEG00000005580	-	88	85.380	Nomascus_leucogenys
ENSPREG00000010236	lsm12b	78	85.106	ENSMEUG00000007501	-	85	85.106	Notamacropus_eugenii
ENSPREG00000010236	lsm12b	95	85.380	ENSOPRG00000008552	LSM12	88	85.380	Ochotona_princeps
ENSPREG00000010236	lsm12b	95	85.965	ENSODEG00000017998	-	88	85.965	Octodon_degus
ENSPREG00000010236	lsm12b	95	78.363	ENSODEG00000007886	-	66	78.363	Octodon_degus
ENSPREG00000010236	lsm12b	95	97.661	ENSONIG00000007933	lsm12b	87	97.661	Oreochromis_niloticus
ENSPREG00000010236	lsm12b	94	80.588	ENSOCUG00000027889	-	88	80.588	Oryctolagus_cuniculus
ENSPREG00000010236	lsm12b	94	79.412	ENSOCUG00000024823	-	88	79.412	Oryctolagus_cuniculus
ENSPREG00000010236	lsm12b	95	83.333	ENSOCUG00000008566	-	88	83.333	Oryctolagus_cuniculus
ENSPREG00000010236	lsm12b	94	80.588	ENSOCUG00000021254	-	88	80.588	Oryctolagus_cuniculus
ENSPREG00000010236	lsm12b	95	96.491	ENSORLG00000011310	lsm12b	87	96.491	Oryzias_latipes
ENSPREG00000010236	lsm12b	95	96.491	ENSORLG00020002060	lsm12b	80	96.491	Oryzias_latipes_hni
ENSPREG00000010236	lsm12b	95	96.491	ENSORLG00015001647	lsm12b	80	96.491	Oryzias_latipes_hsok
ENSPREG00000010236	lsm12b	95	97.076	ENSOMEG00000006184	lsm12b	80	97.076	Oryzias_melastigma
ENSPREG00000010236	lsm12b	95	85.965	ENSOGAG00000010489	LSM12	88	85.965	Otolemur_garnettii
ENSPREG00000010236	lsm12b	95	81.921	ENSOARG00000006589	LSM12	88	81.921	Ovis_aries
ENSPREG00000010236	lsm12b	85	84.314	ENSPPAG00000034974	-	83	84.314	Pan_paniscus
ENSPREG00000010236	lsm12b	95	85.380	ENSPPRG00000023420	LSM12	88	85.380	Panthera_pardus
ENSPREG00000010236	lsm12b	85	84.314	ENSPTIG00000012704	-	82	84.314	Panthera_tigris_altaica
ENSPREG00000010236	lsm12b	62	82.883	ENSPTIG00000014850	-	81	82.883	Panthera_tigris_altaica
ENSPREG00000010236	lsm12b	95	85.380	ENSPTRG00000009261	LSM12	88	85.380	Pan_troglodytes
ENSPREG00000010236	lsm12b	95	85.380	ENSPANG00000021315	-	88	85.380	Papio_anubis
ENSPREG00000010236	lsm12b	95	92.982	ENSPKIG00000021058	lsm12b	87	92.982	Paramormyrops_kingsleyae
ENSPREG00000010236	lsm12b	95	83.041	ENSPKIG00000017932	-	87	83.041	Paramormyrops_kingsleyae
ENSPREG00000010236	lsm12b	95	96.491	ENSPMGG00000021344	lsm12b	87	96.491	Periophthalmus_magnuspinnatus
ENSPREG00000010236	lsm12b	95	85.380	ENSPEMG00000012199	Lsm12	88	85.380	Peromyscus_maniculatus_bairdii
ENSPREG00000010236	lsm12b	83	67.333	ENSPMAG00000005461	lsm12a	86	67.333	Petromyzon_marinus
ENSPREG00000010236	lsm12b	95	85.380	ENSPCIG00000020244	LSM12	88	85.380	Phascolarctos_cinereus
ENSPREG00000010236	lsm12b	95	98.830	ENSPFOG00000015930	lsm12b	87	98.830	Poecilia_formosa
ENSPREG00000010236	lsm12b	95	98.830	ENSPLAG00000021089	lsm12b	87	98.830	Poecilia_latipinna
ENSPREG00000010236	lsm12b	95	98.830	ENSPMEG00000012961	lsm12b	87	98.830	Poecilia_mexicana
ENSPREG00000010236	lsm12b	95	85.380	ENSPPYG00000008344	LSM12	88	85.380	Pongo_abelii
ENSPREG00000010236	lsm12b	78	86.525	ENSPCAG00000008790	LSM12	89	86.525	Procavia_capensis
ENSPREG00000010236	lsm12b	95	85.380	ENSPCOG00000027951	LSM12	88	85.380	Propithecus_coquereli
ENSPREG00000010236	lsm12b	95	85.380	ENSPVAG00000013706	LSM12	88	85.380	Pteropus_vampyrus
ENSPREG00000010236	lsm12b	95	97.661	ENSPNYG00000003386	lsm12b	87	97.661	Pundamilia_nyererei
ENSPREG00000010236	lsm12b	95	94.152	ENSPNAG00000004186	lsm12b	87	94.152	Pygocentrus_nattereri
ENSPREG00000010236	lsm12b	95	86.550	ENSPNAG00000018435	lsm12a	87	86.550	Pygocentrus_nattereri
ENSPREG00000010236	lsm12b	95	85.380	ENSRNOG00000020894	Lsm12	88	85.380	Rattus_norvegicus
ENSPREG00000010236	lsm12b	95	85.380	ENSRBIG00000027910	LSM12	88	85.380	Rhinopithecus_bieti
ENSPREG00000010236	lsm12b	95	85.380	ENSRROG00000045530	-	88	85.380	Rhinopithecus_roxellana
ENSPREG00000010236	lsm12b	64	73.276	ENSRROG00000000537	-	80	73.276	Rhinopithecus_roxellana
ENSPREG00000010236	lsm12b	95	85.380	ENSSBOG00000025310	LSM12	88	85.380	Saimiri_boliviensis_boliviensis
ENSPREG00000010236	lsm12b	88	82.911	ENSSHAG00000014914	LSM12	100	82.911	Sarcophilus_harrisii
ENSPREG00000010236	lsm12b	95	92.982	ENSSFOG00015020392	lsm12a	87	92.982	Scleropages_formosus
ENSPREG00000010236	lsm12b	95	93.567	ENSSFOG00015009612	lsm12	87	93.567	Scleropages_formosus
ENSPREG00000010236	lsm12b	95	98.246	ENSSMAG00000008089	lsm12b	87	98.246	Scophthalmus_maximus
ENSPREG00000010236	lsm12b	95	97.661	ENSSDUG00000012711	lsm12b	87	97.661	Seriola_dumerili
ENSPREG00000010236	lsm12b	95	97.661	ENSSLDG00000007404	lsm12b	87	97.661	Seriola_lalandi_dorsalis
ENSPREG00000010236	lsm12b	85	83.660	ENSSARG00000005537	LSM12	100	83.660	Sorex_araneus
ENSPREG00000010236	lsm12b	95	86.550	ENSSPUG00000011984	LSM12	88	86.550	Sphenodon_punctatus
ENSPREG00000010236	lsm12b	95	98.246	ENSSPAG00000017058	lsm12b	87	98.246	Stegastes_partitus
ENSPREG00000010236	lsm12b	95	85.380	ENSSSCG00000032394	LSM12	88	85.380	Sus_scrofa
ENSPREG00000010236	lsm12b	95	96.491	ENSTRUG00000007121	lsm12b	87	96.491	Takifugu_rubripes
ENSPREG00000010236	lsm12b	95	95.906	ENSTNIG00000014436	lsm12b	87	95.906	Tetraodon_nigroviridis
ENSPREG00000010236	lsm12b	95	84.795	ENSTBEG00000012523	-	88	84.795	Tupaia_belangeri
ENSPREG00000010236	lsm12b	95	82.456	ENSTBEG00000012392	-	88	82.456	Tupaia_belangeri
ENSPREG00000010236	lsm12b	95	85.380	ENSTTRG00000010433	LSM12	88	85.380	Tursiops_truncatus
ENSPREG00000010236	lsm12b	95	85.380	ENSUAMG00000006313	LSM12	98	81.646	Ursus_americanus
ENSPREG00000010236	lsm12b	88	81.646	ENSUMAG00000012987	LSM12	90	81.646	Ursus_maritimus
ENSPREG00000010236	lsm12b	95	80.117	ENSVPAG00000011145	LSM12	88	80.117	Vicugna_pacos
ENSPREG00000010236	lsm12b	95	85.380	ENSVVUG00000017581	LSM12	88	85.380	Vulpes_vulpes
ENSPREG00000010236	lsm12b	89	60.625	ENSXETG00000003371	lsm12	77	60.625	Xenopus_tropicalis
ENSPREG00000010236	lsm12b	95	100.000	ENSXCOG00000003994	lsm12b	87	100.000	Xiphophorus_couchianus
ENSPREG00000010236	lsm12b	95	100.000	ENSXMAG00000020950	lsm12b	87	100.000	Xiphophorus_maculatus