EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010268 (Gene tree)
Gene ID: 103462805
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 28666 bases
Position: chrLG3:27400794-27429459
Accession: 103462805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015209	Urb2	PF10441.9	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015366	-	5076	XM_008405800	ENSPREP00000015209	1577 (aa)	XP_008404022	UPI0004A23951
ENSPRET00000015384	-	5234	XM_017304142	ENSPREP00000015227	1538 (aa)	XP_017159631	-

Gene Model

Click here to download ENSPREG00000010268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010268	urb2	99	33.828	ENSG00000135763	URB2	96	58.333	Homo_sapiens
ENSPREG00000010268	urb2	91	62.731	ENSAPOG00000000608	urb2	100	62.665	Acanthochromis_polyacanthus
ENSPREG00000010268	urb2	100	34.406	ENSAMEG00000009206	URB2	100	34.508	Ailuropoda_melanoleuca
ENSPREG00000010268	urb2	100	64.307	ENSAOCG00000019961	urb2	100	64.367	Amphiprion_ocellaris
ENSPREG00000010268	urb2	100	64.346	ENSAPEG00000005263	urb2	100	64.406	Amphiprion_percula
ENSPREG00000010268	urb2	100	61.916	ENSATEG00000020930	urb2	100	61.848	Anabas_testudineus
ENSPREG00000010268	urb2	97	35.457	ENSAPLG00000002998	URB2	99	35.290	Anas_platyrhynchos
ENSPREG00000010268	urb2	99	36.464	ENSACAG00000001285	URB2	99	36.464	Anolis_carolinensis
ENSPREG00000010268	urb2	99	34.432	ENSANAG00000033963	URB2	99	34.432	Aotus_nancymaae
ENSPREG00000010268	urb2	91	60.079	ENSACLG00000009254	urb2	100	60.343	Astatotilapia_calliptera
ENSPREG00000010268	urb2	99	39.082	ENSAMXG00000003474	urb2	99	39.368	Astyanax_mexicanus
ENSPREG00000010268	urb2	100	34.842	ENSBTAG00000010180	URB2	100	34.907	Bos_taurus
ENSPREG00000010268	urb2	95	56.291	ENSCJAG00000010968	URB2	99	56.291	Callithrix_jacchus
ENSPREG00000010268	urb2	99	33.891	ENSCAFG00000012118	URB2	99	34.035	Canis_familiaris
ENSPREG00000010268	urb2	93	32.799	ENSCAFG00020027217	URB2	98	32.955	Canis_lupus_dingo
ENSPREG00000010268	urb2	100	34.344	ENSCHIG00000014513	URB2	100	34.346	Capra_hircus
ENSPREG00000010268	urb2	100	34.874	ENSTSYG00000006924	URB2	100	34.954	Carlito_syrichta
ENSPREG00000010268	urb2	61	38.736	ENSCPOG00000020777	-	99	39.316	Cavia_porcellus
ENSPREG00000010268	urb2	99	34.220	ENSCCAG00000023932	URB2	99	34.302	Cebus_capucinus
ENSPREG00000010268	urb2	99	34.112	ENSCATG00000043366	URB2	99	34.254	Cercocebus_atys
ENSPREG00000010268	urb2	99	35.056	ENSCLAG00000006268	URB2	99	35.118	Chinchilla_lanigera
ENSPREG00000010268	urb2	99	33.825	ENSCSAG00000010599	URB2	99	33.988	Chlorocebus_sabaeus
ENSPREG00000010268	urb2	69	40.264	ENSCHOG00000010163	URB2	69	40.264	Choloepus_hoffmanni
ENSPREG00000010268	urb2	99	37.055	ENSCPBG00000006191	URB2	99	37.078	Chrysemys_picta_bellii
ENSPREG00000010268	urb2	99	33.907	ENSCANG00000023711	URB2	99	34.028	Colobus_angolensis_palliatus
ENSPREG00000010268	urb2	99	34.882	ENSCGRG00001009591	Urb2	99	34.858	Cricetulus_griseus_chok1gshd
ENSPREG00000010268	urb2	99	34.882	ENSCGRG00000011259	Urb2	99	34.858	Cricetulus_griseus_crigri
ENSPREG00000010268	urb2	100	52.256	ENSCSEG00000000299	urb2	100	52.256	Cynoglossus_semilaevis
ENSPREG00000010268	urb2	100	75.435	ENSCVAG00000011011	urb2	100	75.871	Cyprinodon_variegatus
ENSPREG00000010268	urb2	100	42.419	ENSDARG00000003217	urb2	99	65.000	Danio_rerio
ENSPREG00000010268	urb2	97	32.458	ENSDNOG00000043064	URB2	99	32.863	Dasypus_novemcinctus
ENSPREG00000010268	urb2	99	35.078	ENSDORG00000014975	Urb2	99	35.078	Dipodomys_ordii
ENSPREG00000010268	urb2	95	38.028	ENSETEG00000002869	URB2	95	38.028	Echinops_telfairi
ENSPREG00000010268	urb2	100	34.549	ENSEASG00005012060	URB2	100	34.796	Equus_asinus_asinus
ENSPREG00000010268	urb2	93	57.241	ENSECAG00000012338	URB2	100	57.241	Equus_caballus
ENSPREG00000010268	urb2	92	51.748	ENSEEUG00000002669	URB2	92	51.748	Erinaceus_europaeus
ENSPREG00000010268	urb2	100	46.539	ENSELUG00000014647	urb2	100	46.453	Esox_lucius
ENSPREG00000010268	urb2	99	34.180	ENSFCAG00000007662	URB2	99	34.282	Felis_catus
ENSPREG00000010268	urb2	99	36.012	ENSFALG00000003385	URB2	99	35.504	Ficedula_albicollis
ENSPREG00000010268	urb2	99	34.387	ENSFDAG00000021079	URB2	99	34.325	Fukomys_damarensis
ENSPREG00000010268	urb2	100	76.131	ENSFHEG00000010357	urb2	100	76.317	Fundulus_heteroclitus
ENSPREG00000010268	urb2	99	51.743	ENSGMOG00000012459	urb2	100	51.432	Gadus_morhua
ENSPREG00000010268	urb2	99	35.990	ENSGALG00000011101	URB2	99	35.828	Gallus_gallus
ENSPREG00000010268	urb2	100	59.863	ENSGACG00000016179	urb2	100	59.801	Gasterosteus_aculeatus
ENSPREG00000010268	urb2	99	36.849	ENSGAGG00000021879	URB2	99	36.810	Gopherus_agassizii
ENSPREG00000010268	urb2	99	33.828	ENSGGOG00000025643	URB2	99	33.869	Gorilla_gorilla
ENSPREG00000010268	urb2	100	61.224	ENSHBUG00000018469	urb2	100	61.285	Haplochromis_burtoni
ENSPREG00000010268	urb2	97	33.922	ENSHGLG00000016561	URB2	99	34.048	Heterocephalus_glaber_female
ENSPREG00000010268	urb2	99	34.112	ENSHGLG00100001838	URB2	99	34.050	Heterocephalus_glaber_male
ENSPREG00000010268	urb2	100	39.502	ENSIPUG00000020315	urb2	100	39.502	Ictalurus_punctatus
ENSPREG00000010268	urb2	99	34.309	ENSSTOG00000025323	URB2	99	34.496	Ictidomys_tridecemlineatus
ENSPREG00000010268	urb2	99	35.009	ENSJJAG00000011998	Urb2	99	34.947	Jaculus_jaculus
ENSPREG00000010268	urb2	100	66.465	ENSKMAG00000020129	urb2	100	66.465	Kryptolebias_marmoratus
ENSPREG00000010268	urb2	99	36.884	ENSLACG00000002038	URB2	99	36.621	Latimeria_chalumnae
ENSPREG00000010268	urb2	99	43.043	ENSLOCG00000015462	urb2	99	43.168	Lepisosteus_oculatus
ENSPREG00000010268	urb2	99	34.263	ENSLAFG00000012484	URB2	100	34.263	Loxodonta_africana
ENSPREG00000010268	urb2	99	34.112	ENSMFAG00000039905	URB2	99	34.254	Macaca_fascicularis
ENSPREG00000010268	urb2	99	34.112	ENSMMUG00000009509	URB2	99	34.254	Macaca_mulatta
ENSPREG00000010268	urb2	99	34.074	ENSMNEG00000038762	URB2	99	34.217	Macaca_nemestrina
ENSPREG00000010268	urb2	99	34.050	ENSMLEG00000043252	URB2	99	34.193	Mandrillus_leucophaeus
ENSPREG00000010268	urb2	100	59.202	ENSMAMG00000020365	urb2	100	59.202	Mastacembelus_armatus
ENSPREG00000010268	urb2	100	61.261	ENSMZEG00005011027	urb2	100	61.381	Maylandia_zebra
ENSPREG00000010268	urb2	94	33.984	ENSMGAG00000012073	URB2	98	34.132	Meleagris_gallopavo
ENSPREG00000010268	urb2	95	53.691	ENSMAUG00000017980	Urb2	99	53.691	Mesocricetus_auratus
ENSPREG00000010268	urb2	100	34.453	ENSMICG00000033302	URB2	100	34.658	Microcebus_murinus
ENSPREG00000010268	urb2	99	34.425	ENSMOCG00000020369	Urb2	99	34.611	Microtus_ochrogaster
ENSPREG00000010268	urb2	100	61.570	ENSMALG00000006529	urb2	100	61.511	Monopterus_albus
ENSPREG00000010268	urb2	99	34.215	ENSMUSG00000031976	Urb2	99	34.173	Mus_musculus
ENSPREG00000010268	urb2	99	34.834	ENSMPUG00000012438	URB2	99	34.710	Mustela_putorius_furo
ENSPREG00000010268	urb2	99	34.491	ENSNGAG00000016524	Urb2	99	34.592	Nannospalax_galili
ENSPREG00000010268	urb2	99	34.137	ENSNLEG00000014450	URB2	99	34.427	Nomascus_leucogenys
ENSPREG00000010268	urb2	91	41.892	ENSMEUG00000016434	URB2	92	41.892	Notamacropus_eugenii
ENSPREG00000010268	urb2	88	76.190	ENSOPRG00000009906	URB2	86	76.190	Ochotona_princeps
ENSPREG00000010268	urb2	99	34.850	ENSODEG00000005593	URB2	99	35.034	Octodon_degus
ENSPREG00000010268	urb2	100	61.399	ENSONIG00000017078	urb2	100	61.587	Oreochromis_niloticus
ENSPREG00000010268	urb2	99	33.751	ENSOANG00000013732	URB2	99	33.647	Ornithorhynchus_anatinus
ENSPREG00000010268	urb2	100	34.885	ENSOCUG00000010700	URB2	100	35.050	Oryctolagus_cuniculus
ENSPREG00000010268	urb2	100	60.403	ENSORLG00000010915	urb2	100	60.317	Oryzias_latipes
ENSPREG00000010268	urb2	100	60.475	ENSORLG00020003361	urb2	100	60.414	Oryzias_latipes_hni
ENSPREG00000010268	urb2	100	60.073	ENSORLG00015001534	urb2	100	59.951	Oryzias_latipes_hsok
ENSPREG00000010268	urb2	100	61.275	ENSOMEG00000010076	urb2	100	61.359	Oryzias_melastigma
ENSPREG00000010268	urb2	100	33.989	ENSOGAG00000003021	URB2	100	33.743	Otolemur_garnettii
ENSPREG00000010268	urb2	100	34.527	ENSOARG00000003102	URB2	100	34.425	Ovis_aries
ENSPREG00000010268	urb2	99	33.829	ENSPPAG00000040629	URB2	99	33.952	Pan_paniscus
ENSPREG00000010268	urb2	99	33.827	ENSPPRG00000012767	URB2	99	33.951	Panthera_pardus
ENSPREG00000010268	urb2	99	34.136	ENSPTIG00000012577	URB2	99	70.455	Panthera_tigris_altaica
ENSPREG00000010268	urb2	99	33.829	ENSPTRG00000002092	URB2	99	33.932	Pan_troglodytes
ENSPREG00000010268	urb2	99	32.985	ENSPANG00000002245	URB2	99	33.211	Papio_anubis
ENSPREG00000010268	urb2	99	41.626	ENSPKIG00000005787	urb2	99	41.554	Paramormyrops_kingsleyae
ENSPREG00000010268	urb2	99	36.057	ENSPSIG00000002690	URB2	99	36.079	Pelodiscus_sinensis
ENSPREG00000010268	urb2	96	33.096	ENSPEMG00000019551	Urb2	100	33.204	Peromyscus_maniculatus_bairdii
ENSPREG00000010268	urb2	99	33.832	ENSPCIG00000030071	URB2	99	33.894	Phascolarctos_cinereus
ENSPREG00000010268	urb2	100	94.673	ENSPFOG00000014330	urb2	100	94.673	Poecilia_formosa
ENSPREG00000010268	urb2	100	94.673	ENSPLAG00000014654	urb2	100	94.673	Poecilia_latipinna
ENSPREG00000010268	urb2	100	94.737	ENSPMEG00000012356	urb2	100	94.737	Poecilia_mexicana
ENSPREG00000010268	urb2	100	33.600	ENSPPYG00000000123	URB2	100	33.703	Pongo_abelii
ENSPREG00000010268	urb2	100	34.300	ENSPCOG00000023537	URB2	100	34.587	Propithecus_coquereli
ENSPREG00000010268	urb2	99	32.252	ENSPVAG00000002108	URB2	99	32.333	Pteropus_vampyrus
ENSPREG00000010268	urb2	91	60.079	ENSPNYG00000016840	urb2	100	60.343	Pundamilia_nyererei
ENSPREG00000010268	urb2	99	41.486	ENSPNAG00000013684	urb2	99	41.460	Pygocentrus_nattereri
ENSPREG00000010268	urb2	99	34.447	ENSRNOG00000026853	Urb2	97	34.732	Rattus_norvegicus
ENSPREG00000010268	urb2	99	33.744	ENSRBIG00000037937	URB2	99	33.866	Rhinopithecus_bieti
ENSPREG00000010268	urb2	99	33.621	ENSRROG00000039854	URB2	99	33.867	Rhinopithecus_roxellana
ENSPREG00000010268	urb2	99	34.074	ENSSBOG00000023055	URB2	99	34.074	Saimiri_boliviensis_boliviensis
ENSPREG00000010268	urb2	99	33.995	ENSSHAG00000014735	URB2	99	33.995	Sarcophilus_harrisii
ENSPREG00000010268	urb2	98	41.073	ENSSFOG00015015432	urb2	99	41.377	Scleropages_formosus
ENSPREG00000010268	urb2	91	59.766	ENSSMAG00000004984	urb2	100	59.766	Scophthalmus_maximus
ENSPREG00000010268	urb2	100	61.832	ENSSDUG00000000902	urb2	100	62.067	Seriola_dumerili
ENSPREG00000010268	urb2	99	36.169	ENSSPUG00000018549	URB2	99	36.076	Sphenodon_punctatus
ENSPREG00000010268	urb2	100	64.596	ENSSPAG00000013632	urb2	100	64.596	Stegastes_partitus
ENSPREG00000010268	urb2	100	34.997	ENSSSCG00000010186	URB2	100	34.810	Sus_scrofa
ENSPREG00000010268	urb2	99	36.089	ENSTGUG00000009990	URB2	99	36.089	Taeniopygia_guttata
ENSPREG00000010268	urb2	100	52.969	ENSTRUG00000008173	urb2	100	52.969	Takifugu_rubripes
ENSPREG00000010268	urb2	100	52.905	ENSTNIG00000017689	urb2	100	53.047	Tetraodon_nigroviridis
ENSPREG00000010268	urb2	95	76.190	ENSTTRG00000014864	URB2	95	76.190	Tursiops_truncatus
ENSPREG00000010268	urb2	100	34.468	ENSUAMG00000015022	URB2	100	34.570	Ursus_americanus
ENSPREG00000010268	urb2	100	34.468	ENSUMAG00000004728	URB2	100	34.570	Ursus_maritimus
ENSPREG00000010268	urb2	53	57.971	ENSVPAG00000001750	-	51	57.971	Vicugna_pacos
ENSPREG00000010268	urb2	99	34.014	ENSVVUG00000006747	URB2	99	34.097	Vulpes_vulpes
ENSPREG00000010268	urb2	99	33.456	ENSXETG00000023331	urb2	99	33.456	Xenopus_tropicalis
ENSPREG00000010268	urb2	100	92.454	ENSXMAG00000015059	urb2	100	92.454	Xiphophorus_maculatus