EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010354 (Gene tree)
Gene ID: 103474166
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 14558 bases
Position: chrLG13:3125903-3140460
Accession: 103474166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015383	AARP2CN	PF08142.12	6.6e-20	1	1
ENSPREP00000015369	AARP2CN	PF08142.12	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015526	-	2553	XM_008424949	ENSPREP00000015369	850 (aa)	XP_008423171	-
ENSPRET00000015540	-	2595	-	ENSPREP00000015383	466 (aa)	-	-

Gene Model

Click here to download ENSPREG00000010354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010354	tsr1	95	54.803	ENSG00000167721	TSR1	97	54.747	Homo_sapiens
ENSPREG00000010354	tsr1	96	86.258	ENSAPOG00000020891	tsr1	97	85.872	Acanthochromis_polyacanthus
ENSPREG00000010354	tsr1	95	54.131	ENSAMEG00000007599	TSR1	96	52.741	Ailuropoda_melanoleuca
ENSPREG00000010354	tsr1	96	81.550	ENSACIG00000007090	tsr1	97	81.281	Amphilophus_citrinellus
ENSPREG00000010354	tsr1	96	85.855	ENSAOCG00000023284	tsr1	97	85.099	Amphiprion_ocellaris
ENSPREG00000010354	tsr1	89	85.185	ENSAPEG00000008452	tsr1	97	84.901	Amphiprion_percula
ENSPREG00000010354	tsr1	96	83.130	ENSATEG00000021961	tsr1	97	82.864	Anabas_testudineus
ENSPREG00000010354	tsr1	87	56.528	ENSAPLG00000013422	TSR1	97	57.412	Anas_platyrhynchos
ENSPREG00000010354	tsr1	88	50.957	ENSACAG00000000859	TSR1	92	49.256	Anolis_carolinensis
ENSPREG00000010354	tsr1	95	54.759	ENSANAG00000031071	TSR1	97	54.131	Aotus_nancymaae
ENSPREG00000010354	tsr1	96	84.314	ENSACLG00000007595	tsr1	97	84.049	Astatotilapia_calliptera
ENSPREG00000010354	tsr1	90	72.249	ENSAMXG00000008470	tsr1	89	72.249	Astyanax_mexicanus
ENSPREG00000010354	tsr1	94	55.995	ENSBTAG00000004225	TSR1	97	55.542	Bos_taurus
ENSPREG00000010354	tsr1	94	40.317	WBGene00006497	tag-151	96	39.515	Caenorhabditis_elegans
ENSPREG00000010354	tsr1	64	30.252	WBGene00022021	Y61A9LA.10	50	31.050	Caenorhabditis_elegans
ENSPREG00000010354	tsr1	95	53.770	ENSCJAG00000012456	TSR1	97	53.071	Callithrix_jacchus
ENSPREG00000010354	tsr1	94	48.533	ENSCAFG00000019273	-	96	54.925	Canis_familiaris
ENSPREG00000010354	tsr1	95	54.803	ENSCAFG00000002106	-	97	53.724	Canis_familiaris
ENSPREG00000010354	tsr1	95	54.803	ENSCAFG00020009728	TSR1	97	53.724	Canis_lupus_dingo
ENSPREG00000010354	tsr1	95	56.420	ENSCHIG00000023935	TSR1	97	55.748	Capra_hircus
ENSPREG00000010354	tsr1	95	55.377	ENSTSYG00000005468	TSR1	97	54.871	Carlito_syrichta
ENSPREG00000010354	tsr1	90	54.016	ENSCPOG00000014833	TSR1	99	53.627	Cavia_porcellus
ENSPREG00000010354	tsr1	90	53.428	ENSCCAG00000028962	TSR1	98	52.632	Cebus_capucinus
ENSPREG00000010354	tsr1	95	54.557	ENSCATG00000044262	TSR1	97	54.433	Cercocebus_atys
ENSPREG00000010354	tsr1	95	55.377	ENSCLAG00000005567	TSR1	99	54.293	Chinchilla_lanigera
ENSPREG00000010354	tsr1	95	54.557	ENSCSAG00000013788	TSR1	97	54.433	Chlorocebus_sabaeus
ENSPREG00000010354	tsr1	94	54.919	ENSCPBG00000020363	TSR1	95	54.024	Chrysemys_picta_bellii
ENSPREG00000010354	tsr1	94	45.322	ENSCING00000020658	-	99	44.553	Ciona_intestinalis
ENSPREG00000010354	tsr1	94	44.815	ENSCSAVG00000001875	-	100	44.581	Ciona_savignyi
ENSPREG00000010354	tsr1	95	48.765	ENSCANG00000033056	TSR1	97	50.308	Colobus_angolensis_palliatus
ENSPREG00000010354	tsr1	95	54.074	ENSCGRG00001023942	Tsr1	97	53.704	Cricetulus_griseus_chok1gshd
ENSPREG00000010354	tsr1	95	50.062	ENSCGRG00000013015	Tsr1	97	49.504	Cricetulus_griseus_crigri
ENSPREG00000010354	tsr1	96	78.967	ENSCSEG00000013009	tsr1	97	78.202	Cynoglossus_semilaevis
ENSPREG00000010354	tsr1	96	88.807	ENSCVAG00000000506	tsr1	97	88.547	Cyprinodon_variegatus
ENSPREG00000010354	tsr1	97	72.608	ENSDARG00000007744	tsr1	97	74.694	Danio_rerio
ENSPREG00000010354	tsr1	95	55.748	ENSDNOG00000004715	TSR1	96	56.957	Dasypus_novemcinctus
ENSPREG00000010354	tsr1	94	47.572	ENSDORG00000023234	-	99	47.198	Dipodomys_ordii
ENSPREG00000010354	tsr1	95	54.321	ENSDORG00000016371	-	97	53.571	Dipodomys_ordii
ENSPREG00000010354	tsr1	94	44.581	FBgn0037073	Tsr1	96	44.143	Drosophila_melanogaster
ENSPREG00000010354	tsr1	82	68.905	ENSETEG00000017534	TSR1	85	68.440	Echinops_telfairi
ENSPREG00000010354	tsr1	91	51.592	ENSEBUG00000013731	TSR1	96	50.126	Eptatretus_burgeri
ENSPREG00000010354	tsr1	95	55.871	ENSEASG00005009302	TSR1	94	55.322	Equus_asinus_asinus
ENSPREG00000010354	tsr1	95	55.817	ENSECAG00000009114	TSR1	97	55.322	Equus_caballus
ENSPREG00000010354	tsr1	96	74.969	ENSELUG00000020984	tsr1	94	74.574	Esox_lucius
ENSPREG00000010354	tsr1	95	54.579	ENSFCAG00000006313	TSR1	97	54.074	Felis_catus
ENSPREG00000010354	tsr1	96	58.029	ENSFALG00000006532	TSR1	97	57.178	Ficedula_albicollis
ENSPREG00000010354	tsr1	95	54.455	ENSFDAG00000006038	TSR1	97	54.151	Fukomys_damarensis
ENSPREG00000010354	tsr1	96	89.609	ENSFHEG00000003626	tsr1	97	89.474	Fundulus_heteroclitus
ENSPREG00000010354	tsr1	96	71.027	ENSGMOG00000010336	tsr1	97	71.936	Gadus_morhua
ENSPREG00000010354	tsr1	99	95.887	ENSGAFG00000012993	tsr1	97	94.363	Gambusia_affinis
ENSPREG00000010354	tsr1	98	78.710	ENSGACG00000010843	tsr1	97	80.562	Gasterosteus_aculeatus
ENSPREG00000010354	tsr1	79	34.054	ENSGAGG00000000440	-	98	34.054	Gopherus_agassizii
ENSPREG00000010354	tsr1	94	55.348	ENSGAGG00000025619	-	97	54.568	Gopherus_agassizii
ENSPREG00000010354	tsr1	95	54.680	ENSGGOG00000001704	TSR1	97	54.871	Gorilla_gorilla
ENSPREG00000010354	tsr1	96	84.436	ENSHBUG00000017904	tsr1	97	84.540	Haplochromis_burtoni
ENSPREG00000010354	tsr1	92	48.465	ENSHGLG00000015688	-	95	48.087	Heterocephalus_glaber_female
ENSPREG00000010354	tsr1	95	55.542	ENSHGLG00000012806	-	97	54.084	Heterocephalus_glaber_female
ENSPREG00000010354	tsr1	95	55.542	ENSHGLG00100015392	TSR1	97	54.084	Heterocephalus_glaber_male
ENSPREG00000010354	tsr1	96	77.368	ENSHCOG00000001432	tsr1	97	76.847	Hippocampus_comes
ENSPREG00000010354	tsr1	97	73.253	ENSIPUG00000004618	tsr1	97	73.929	Ictalurus_punctatus
ENSPREG00000010354	tsr1	95	55.253	ENSSTOG00000011819	TSR1	97	55.569	Ictidomys_tridecemlineatus
ENSPREG00000010354	tsr1	87	53.629	ENSJJAG00000019505	Tsr1	93	51.747	Jaculus_jaculus
ENSPREG00000010354	tsr1	96	82.598	ENSKMAG00000005763	tsr1	97	83.804	Kryptolebias_marmoratus
ENSPREG00000010354	tsr1	99	81.562	ENSLBEG00000021823	tsr1	97	84.172	Labrus_bergylta
ENSPREG00000010354	tsr1	96	57.959	ENSLACG00000002197	TSR1	97	56.438	Latimeria_chalumnae
ENSPREG00000010354	tsr1	86	75.000	ENSLOCG00000006491	TSR1	95	75.000	Lepisosteus_oculatus
ENSPREG00000010354	tsr1	61	50.175	ENSLAFG00000022396	-	94	49.825	Loxodonta_africana
ENSPREG00000010354	tsr1	95	54.680	ENSMFAG00000021330	TSR1	97	54.557	Macaca_fascicularis
ENSPREG00000010354	tsr1	95	54.557	ENSMMUG00000017519	TSR1	97	54.433	Macaca_mulatta
ENSPREG00000010354	tsr1	95	54.680	ENSMNEG00000031382	TSR1	97	54.557	Macaca_nemestrina
ENSPREG00000010354	tsr1	95	54.557	ENSMLEG00000036733	TSR1	97	54.433	Mandrillus_leucophaeus
ENSPREG00000010354	tsr1	96	82.530	ENSMAMG00000017918	tsr1	97	84.005	Mastacembelus_armatus
ENSPREG00000010354	tsr1	96	84.889	ENSMZEG00005007477	tsr1	97	84.256	Maylandia_zebra
ENSPREG00000010354	tsr1	95	57.213	ENSMGAG00000005576	TSR1	97	56.773	Meleagris_gallopavo
ENSPREG00000010354	tsr1	95	55.569	ENSMICG00000012943	TSR1	97	55.390	Microcebus_murinus
ENSPREG00000010354	tsr1	95	54.938	ENSMOCG00000022764	Tsr1	97	53.523	Microtus_ochrogaster
ENSPREG00000010354	tsr1	96	83.272	ENSMMOG00000014280	tsr1	97	82.266	Mola_mola
ENSPREG00000010354	tsr1	94	55.788	ENSMODG00000010658	TSR1	97	55.405	Monodelphis_domestica
ENSPREG00000010354	tsr1	96	83.272	ENSMALG00000011681	tsr1	97	84.852	Monopterus_albus
ENSPREG00000010354	tsr1	95	54.017	MGP_CAROLIEiJ_G0016727	Tsr1	97	53.713	Mus_caroli
ENSPREG00000010354	tsr1	95	54.635	ENSMUSG00000038335	Tsr1	97	54.332	Mus_musculus
ENSPREG00000010354	tsr1	95	55.006	MGP_PahariEiJ_G0017864	Tsr1	97	54.703	Mus_pahari
ENSPREG00000010354	tsr1	95	54.635	MGP_SPRETEiJ_G0017570	Tsr1	97	54.332	Mus_spretus
ENSPREG00000010354	tsr1	78	55.440	ENSMPUG00000013000	TSR1	96	56.061	Mustela_putorius_furo
ENSPREG00000010354	tsr1	95	55.995	ENSMLUG00000003505	TSR1	97	55.198	Myotis_lucifugus
ENSPREG00000010354	tsr1	83	46.056	ENSNGAG00000020455	-	96	45.547	Nannospalax_galili
ENSPREG00000010354	tsr1	97	83.676	ENSNBRG00000020728	tsr1	97	84.417	Neolamprologus_brichardi
ENSPREG00000010354	tsr1	95	49.877	ENSNLEG00000017184	TSR1	97	66.258	Nomascus_leucogenys
ENSPREG00000010354	tsr1	88	47.045	ENSMEUG00000015828	TSR1	99	50.597	Notamacropus_eugenii
ENSPREG00000010354	tsr1	96	82.609	ENSONIG00000013131	tsr1	97	82.725	Oreochromis_niloticus
ENSPREG00000010354	tsr1	95	55.377	ENSOCUG00000014256	TSR1	97	55.446	Oryctolagus_cuniculus
ENSPREG00000010354	tsr1	96	82.598	ENSORLG00000004926	tsr1	97	82.945	Oryzias_latipes
ENSPREG00000010354	tsr1	96	82.475	ENSORLG00020008792	tsr1	97	82.945	Oryzias_latipes_hni
ENSPREG00000010354	tsr1	96	83.088	ENSORLG00015013838	tsr1	97	83.436	Oryzias_latipes_hsok
ENSPREG00000010354	tsr1	96	83.578	ENSOMEG00000004830	tsr1	97	83.436	Oryzias_melastigma
ENSPREG00000010354	tsr1	95	54.223	ENSOGAG00000004492	TSR1	97	53.846	Otolemur_garnettii
ENSPREG00000010354	tsr1	95	56.420	ENSOARG00000015437	TSR1	94	55.748	Ovis_aries
ENSPREG00000010354	tsr1	95	54.803	ENSPPAG00000036355	TSR1	97	54.747	Pan_paniscus
ENSPREG00000010354	tsr1	95	54.332	ENSPPRG00000015519	-	97	53.827	Panthera_pardus
ENSPREG00000010354	tsr1	95	54.332	ENSPTIG00000010608	TSR1	97	53.827	Panthera_tigris_altaica
ENSPREG00000010354	tsr1	95	54.803	ENSPTRG00000008547	TSR1	97	54.747	Pan_troglodytes
ENSPREG00000010354	tsr1	95	51.911	ENSPANG00000024463	TSR1	97	52.528	Papio_anubis
ENSPREG00000010354	tsr1	96	70.660	ENSPKIG00000013972	tsr1	97	71.288	Paramormyrops_kingsleyae
ENSPREG00000010354	tsr1	83	55.446	ENSPSIG00000018258	TSR1	97	54.584	Pelodiscus_sinensis
ENSPREG00000010354	tsr1	96	78.844	ENSPMGG00000011577	tsr1	97	77.586	Periophthalmus_magnuspinnatus
ENSPREG00000010354	tsr1	95	53.646	ENSPEMG00000018033	Tsr1	97	53.094	Peromyscus_maniculatus_bairdii
ENSPREG00000010354	tsr1	94	55.501	ENSPCIG00000009357	TSR1	95	55.610	Phascolarctos_cinereus
ENSPREG00000010354	tsr1	97	97.143	ENSPFOG00000004483	TSR1	97	96.319	Poecilia_formosa
ENSPREG00000010354	tsr1	99	96.976	ENSPLAG00000022320	tsr1	97	97.433	Poecilia_latipinna
ENSPREG00000010354	tsr1	99	97.408	ENSPMEG00000004577	tsr1	97	97.800	Poecilia_mexicana
ENSPREG00000010354	tsr1	95	50.245	ENSPPYG00000007792	TSR1	97	50.244	Pongo_abelii
ENSPREG00000010354	tsr1	83	50.129	ENSPCAG00000012973	-	70	63.889	Procavia_capensis
ENSPREG00000010354	tsr1	95	55.514	ENSPCOG00000017928	TSR1	97	54.963	Propithecus_coquereli
ENSPREG00000010354	tsr1	94	55.322	ENSPVAG00000002162	TSR1	97	55.117	Pteropus_vampyrus
ENSPREG00000010354	tsr1	96	84.559	ENSPNYG00000016163	tsr1	97	84.294	Pundamilia_nyererei
ENSPREG00000010354	tsr1	96	72.859	ENSPNAG00000008659	tsr1	97	74.174	Pygocentrus_nattereri
ENSPREG00000010354	tsr1	95	54.265	ENSRNOG00000002980	Tsr1	97	53.742	Rattus_norvegicus
ENSPREG00000010354	tsr1	95	54.803	ENSRBIG00000040016	TSR1	97	54.657	Rhinopithecus_bieti
ENSPREG00000010354	tsr1	95	54.680	ENSRROG00000030361	TSR1	97	54.534	Rhinopithecus_roxellana
ENSPREG00000010354	tsr1	93	30.535	YDL060W	-	97	30.419	Saccharomyces_cerevisiae
ENSPREG00000010354	tsr1	95	54.310	ENSSBOG00000020785	TSR1	97	54.007	Saimiri_boliviensis_boliviensis
ENSPREG00000010354	tsr1	94	55.760	ENSSHAG00000011394	TSR1	99	54.819	Sarcophilus_harrisii
ENSPREG00000010354	tsr1	96	72.325	ENSSFOG00015005455	tsr1	97	72.537	Scleropages_formosus
ENSPREG00000010354	tsr1	96	82.780	ENSSMAG00000009504	tsr1	97	82.389	Scophthalmus_maximus
ENSPREG00000010354	tsr1	96	85.452	ENSSDUG00000012074	tsr1	97	84.945	Seriola_dumerili
ENSPREG00000010354	tsr1	99	82.646	ENSSLDG00000002031	tsr1	97	84.191	Seriola_lalandi_dorsalis
ENSPREG00000010354	tsr1	88	55.696	ENSSARG00000000759	TSR1	90	57.080	Sorex_araneus
ENSPREG00000010354	tsr1	97	55.689	ENSSPUG00000007042	TSR1	99	55.317	Sphenodon_punctatus
ENSPREG00000010354	tsr1	96	85.627	ENSSPAG00000021951	tsr1	97	85.627	Stegastes_partitus
ENSPREG00000010354	tsr1	95	55.748	ENSSSCG00000038534	TSR1	97	55.569	Sus_scrofa
ENSPREG00000010354	tsr1	87	60.081	ENSTGUG00000005883	TSR1	98	58.737	Taeniopygia_guttata
ENSPREG00000010354	tsr1	96	80.320	ENSTRUG00000004665	tsr1	97	80.419	Takifugu_rubripes
ENSPREG00000010354	tsr1	96	80.294	ENSTNIG00000016196	tsr1	97	81.088	Tetraodon_nigroviridis
ENSPREG00000010354	tsr1	63	76.636	ENSTBEG00000015275	-	63	76.636	Tupaia_belangeri
ENSPREG00000010354	tsr1	95	56.473	ENSTTRG00000001177	TSR1	97	55.446	Tursiops_truncatus
ENSPREG00000010354	tsr1	95	54.512	ENSUAMG00000025160	TSR1	97	52.696	Ursus_americanus
ENSPREG00000010354	tsr1	91	53.649	ENSUMAG00000009294	TSR1	95	53.418	Ursus_maritimus
ENSPREG00000010354	tsr1	94	49.887	ENSVPAG00000000228	TSR1	63	50.000	Vicugna_pacos
ENSPREG00000010354	tsr1	95	54.926	ENSVVUG00000021767	TSR1	97	53.846	Vulpes_vulpes
ENSPREG00000010354	tsr1	96	52.791	ENSXETG00000023797	tsr1	97	52.121	Xenopus_tropicalis
ENSPREG00000010354	tsr1	96	93.481	ENSXCOG00000009635	tsr1	97	92.015	Xiphophorus_couchianus
ENSPREG00000010354	tsr1	99	92.842	ENSXMAG00000001397	tsr1	94	95.460	Xiphophorus_maculatus