EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010377 (Gene tree)
Gene ID: 103471824
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2641 bases
Position: chrLG10:30905292-30907932
Accession: 103471824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015416	Gar1	PF04410.14	8.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015573	-	705	XM_008421032	ENSPREP00000015416	234 (aa)	XP_008419254	-

Gene Model

Click here to download ENSPREG00000010377's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010377	gar1	68	77.848	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSPREG00000010377	gar1	67	80.128	ENSEASG00005004658	GAR1	65	86.525	Equus_asinus_asinus
ENSPREG00000010377	gar1	67	79.487	ENSECAG00000013624	GAR1	65	85.816	Equus_caballus
ENSPREG00000010377	gar1	82	84.896	ENSGAFG00000016833	gar1	100	95.798	Gambusia_affinis
ENSPREG00000010377	gar1	72	86.127	ENSHBUG00000023860	gar1	86	86.127	Haplochromis_burtoni
ENSPREG00000010377	gar1	52	86.777	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSPREG00000010377	gar1	64	83.893	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSPREG00000010377	gar1	64	82.550	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSPREG00000010377	gar1	74	83.221	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSPREG00000010377	gar1	74	82.237	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSPREG00000010377	gar1	65	82.237	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSPREG00000010377	gar1	74	82.237	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSPREG00000010377	gar1	60	71.724	ENSPANG00000033062	-	59	71.724	Papio_anubis
ENSPREG00000010377	gar1	59	70.290	ENSPCAG00000015897	GAR1	56	80.000	Procavia_capensis
ENSPREG00000010377	gar1	62	77.241	ENSPCOG00000027049	GAR1	64	91.200	Propithecus_coquereli
ENSPREG00000010377	gar1	64	83.893	ENSRNOG00000061146	Gar1	63	95.327	Rattus_norvegicus
ENSPREG00000010377	gar1	55	83.594	ENSSHAG00000002161	GAR1	69	90.909	Sarcophilus_harrisii
ENSPREG00000010377	gar1	69	77.778	ENSVVUG00000017612	GAR1	55	92.523	Vulpes_vulpes
ENSPREG00000010377	gar1	100	97.458	ENSXCOG00000014843	GAR1	100	97.458	Xiphophorus_couchianus
ENSPREG00000010377	gar1	90	96.698	ENSXMAG00000002316	GAR1	89	96.698	Xiphophorus_maculatus