EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010381 (Gene tree)
Gene ID: 103457348
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 6890 bases
Position: chrLG21:12842028-12848917
Accession: 103457348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015396	RRM_1	PF00076.22	5.5e-32	1	2
ENSPREP00000015396	RRM_1	PF00076.22	5.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015553	-	929	XM_008397387	ENSPREP00000015396	301 (aa)	XP_008395609	UPI0004A24615

Gene Model

Click here to download ENSPREG00000010381's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG
pret05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010381	srsf5b	58	42.222	ENSPREG00000013165	srsf9	63	40.556
ENSPREG00000010381	srsf5b	62	42.487	ENSPREG00000009667	srsf1a	69	40.102
ENSPREG00000010381	srsf5b	55	48.571	ENSPREG00000016792	-	66	49.133
ENSPREG00000010381	srsf5b	61	67.016	ENSPREG00000018091	srsf5a	92	52.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010381	srsf5b	89	94.052	ENSAPOG00000008642	srsf5b	92	94.052	Acanthochromis_polyacanthus
ENSPREG00000010381	srsf5b	100	90.099	ENSACIG00000010742	srsf5b	92	91.111	Amphilophus_citrinellus
ENSPREG00000010381	srsf5b	89	93.680	ENSAOCG00000005719	srsf5b	92	93.680	Amphiprion_ocellaris
ENSPREG00000010381	srsf5b	89	93.680	ENSAPEG00000007830	srsf5b	92	93.680	Amphiprion_percula
ENSPREG00000010381	srsf5b	89	92.565	ENSATEG00000019112	srsf5b	92	92.193	Anabas_testudineus
ENSPREG00000010381	srsf5b	63	81.579	ENSAPLG00000014681	SRSF5	96	70.357	Anas_platyrhynchos
ENSPREG00000010381	srsf5b	74	72.889	ENSACAG00000005143	SRSF5	96	73.529	Anolis_carolinensis
ENSPREG00000010381	srsf5b	61	83.784	ENSANAG00000027977	-	94	72.830	Aotus_nancymaae
ENSPREG00000010381	srsf5b	100	91.060	ENSACLG00000026424	srsf5b	92	94.052	Astatotilapia_calliptera
ENSPREG00000010381	srsf5b	63	94.180	ENSAMXG00000011932	srsf5b	84	94.531	Astyanax_mexicanus
ENSPREG00000010381	srsf5b	63	82.812	ENSTSYG00000007786	SRSF5	96	73.260	Carlito_syrichta
ENSPREG00000010381	srsf5b	61	82.162	ENSCAPG00000008801	SRSF5	91	74.231	Cavia_aperea
ENSPREG00000010381	srsf5b	61	82.162	ENSCPOG00000039926	SRSF5	91	74.046	Cavia_porcellus
ENSPREG00000010381	srsf5b	61	83.784	ENSCCAG00000029002	SRSF5	94	72.830	Cebus_capucinus
ENSPREG00000010381	srsf5b	61	83.784	ENSCATG00000045051	SRSF5	94	72.830	Cercocebus_atys
ENSPREG00000010381	srsf5b	63	82.812	ENSCLAG00000004755	SRSF5	96	72.727	Chinchilla_lanigera
ENSPREG00000010381	srsf5b	74	71.111	ENSCPBG00000021653	SRSF5	96	73.162	Chrysemys_picta_bellii
ENSPREG00000010381	srsf5b	61	83.784	ENSCANG00000030560	SRSF5	94	72.830	Colobus_angolensis_palliatus
ENSPREG00000010381	srsf5b	81	91.903	ENSCSEG00000003801	srsf5b	91	89.888	Cynoglossus_semilaevis
ENSPREG00000010381	srsf5b	100	90.462	ENSCVAG00000017240	srsf5b	100	90.462	Cyprinodon_variegatus
ENSPREG00000010381	srsf5b	61	94.054	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSPREG00000010381	srsf5b	61	83.784	ENSDNOG00000006160	SRSF5	92	74.231	Dasypus_novemcinctus
ENSPREG00000010381	srsf5b	61	79.348	ENSETEG00000020396	SRSF5	91	71.206	Echinops_telfairi
ENSPREG00000010381	srsf5b	62	64.062	ENSEBUG00000006229	srsf5b	89	51.825	Eptatretus_burgeri
ENSPREG00000010381	srsf5b	89	70.395	ENSELUG00000019852	srsf5b	85	80.556	Esox_lucius
ENSPREG00000010381	srsf5b	61	82.065	ENSFALG00000004979	SRSF5	94	72.727	Ficedula_albicollis
ENSPREG00000010381	srsf5b	61	83.784	ENSFDAG00000011562	SRSF5	92	74.231	Fukomys_damarensis
ENSPREG00000010381	srsf5b	100	94.788	ENSFHEG00000009476	srsf5b	100	94.788	Fundulus_heteroclitus
ENSPREG00000010381	srsf5b	62	77.434	ENSGMOG00000000595	srsf5b	99	76.549	Gadus_morhua
ENSPREG00000010381	srsf5b	61	81.522	ENSGALG00000009421	SRSF5	98	65.169	Gallus_gallus
ENSPREG00000010381	srsf5b	100	99.336	ENSGAFG00000002865	srsf5b	100	99.336	Gambusia_affinis
ENSPREG00000010381	srsf5b	100	69.613	ENSGACG00000007834	srsf5b	86	90.441	Gasterosteus_aculeatus
ENSPREG00000010381	srsf5b	74	71.111	ENSGAGG00000004447	SRSF5	96	73.162	Gopherus_agassizii
ENSPREG00000010381	srsf5b	61	83.784	ENSGGOG00000016462	SRSF5	94	72.830	Gorilla_gorilla
ENSPREG00000010381	srsf5b	100	90.728	ENSHBUG00000012462	srsf5b	93	99.219	Haplochromis_burtoni
ENSPREG00000010381	srsf5b	59	59.777	ENSHGLG00100000095	-	62	59.444	Heterocephalus_glaber_male
ENSPREG00000010381	srsf5b	62	88.542	ENSHCOG00000005592	srsf5b	91	76.364	Hippocampus_comes
ENSPREG00000010381	srsf5b	89	95.539	ENSKMAG00000020486	srsf5b	89	95.167	Kryptolebias_marmoratus
ENSPREG00000010381	srsf5b	89	91.144	ENSLBEG00000013647	srsf5b	92	90.037	Labrus_bergylta
ENSPREG00000010381	srsf5b	61	84.783	ENSLACG00000005874	SRSF5	92	75.379	Latimeria_chalumnae
ENSPREG00000010381	srsf5b	61	86.772	ENSLOCG00000012438	srsf5b	70	82.902	Lepisosteus_oculatus
ENSPREG00000010381	srsf5b	61	83.243	ENSLAFG00000005260	SRSF5	92	73.846	Loxodonta_africana
ENSPREG00000010381	srsf5b	61	83.784	ENSMFAG00000002393	SRSF5	94	72.830	Macaca_fascicularis
ENSPREG00000010381	srsf5b	61	83.784	ENSMNEG00000030872	SRSF5	94	72.830	Macaca_nemestrina
ENSPREG00000010381	srsf5b	61	83.784	ENSMLEG00000030017	SRSF5	94	72.830	Mandrillus_leucophaeus
ENSPREG00000010381	srsf5b	83	93.625	ENSMAMG00000002673	srsf5b	92	92.565	Mastacembelus_armatus
ENSPREG00000010381	srsf5b	100	91.060	ENSMZEG00005003550	srsf5b	92	94.052	Maylandia_zebra
ENSPREG00000010381	srsf5b	63	81.771	ENSMODG00000011362	SRSF5	96	72.794	Monodelphis_domestica
ENSPREG00000010381	srsf5b	89	91.176	ENSMALG00000021875	srsf5b	84	98.450	Monopterus_albus
ENSPREG00000010381	srsf5b	100	86.842	ENSNBRG00000001285	srsf5b	92	90.775	Neolamprologus_brichardi
ENSPREG00000010381	srsf5b	61	83.784	ENSNLEG00000001615	SRSF5	94	72.830	Nomascus_leucogenys
ENSPREG00000010381	srsf5b	63	81.250	ENSOPRG00000008286	SRSF5	95	72.464	Ochotona_princeps
ENSPREG00000010381	srsf5b	61	82.162	ENSODEG00000013469	-	92	74.615	Octodon_degus
ENSPREG00000010381	srsf5b	100	91.060	ENSONIG00000005759	srsf5b	92	94.052	Oreochromis_niloticus
ENSPREG00000010381	srsf5b	65	78.061	ENSOANG00000013336	SRSF5	96	68.571	Ornithorhynchus_anatinus
ENSPREG00000010381	srsf5b	93	66.429	ENSOCUG00000009274	SRSF5	95	72.364	Oryctolagus_cuniculus
ENSPREG00000010381	srsf5b	89	78.451	ENSORLG00000029854	srsf5b	92	79.461	Oryzias_latipes
ENSPREG00000010381	srsf5b	89	90.775	ENSORLG00015001720	srsf5b	92	91.144	Oryzias_latipes_hsok
ENSPREG00000010381	srsf5b	90	90.110	ENSOMEG00000020690	srsf5b	67	89.630	Oryzias_melastigma
ENSPREG00000010381	srsf5b	61	83.784	ENSPPAG00000029921	SRSF5	94	72.830	Pan_paniscus
ENSPREG00000010381	srsf5b	61	83.784	ENSPTRG00000006488	SRSF5	94	72.830	Pan_troglodytes
ENSPREG00000010381	srsf5b	61	83.784	ENSPANG00000021091	SRSF5	94	72.830	Papio_anubis
ENSPREG00000010381	srsf5b	61	82.703	ENSPSIG00000012522	SRSF5	93	75.385	Pelodiscus_sinensis
ENSPREG00000010381	srsf5b	63	61.111	ENSPMAG00000007790	srsf5b	68	61.421	Petromyzon_marinus
ENSPREG00000010381	srsf5b	63	81.771	ENSPCIG00000011877	SRSF5	96	72.794	Phascolarctos_cinereus
ENSPREG00000010381	srsf5b	100	99.336	ENSPFOG00000017700	srsf5b	100	99.336	Poecilia_formosa
ENSPREG00000010381	srsf5b	100	99.007	ENSPLAG00000006480	srsf5b	100	99.007	Poecilia_latipinna
ENSPREG00000010381	srsf5b	100	99.336	ENSPMEG00000012751	srsf5b	100	99.336	Poecilia_mexicana
ENSPREG00000010381	srsf5b	50	79.739	ENSPCAG00000004405	SRSF5	100	77.632	Procavia_capensis
ENSPREG00000010381	srsf5b	100	82.781	ENSPNYG00000002669	srsf5b	94	99.219	Pundamilia_nyererei
ENSPREG00000010381	srsf5b	63	93.651	ENSPNAG00000011262	srsf5b	84	93.750	Pygocentrus_nattereri
ENSPREG00000010381	srsf5b	61	83.784	ENSRBIG00000013003	SRSF5	94	72.830	Rhinopithecus_bieti
ENSPREG00000010381	srsf5b	61	83.784	ENSRROG00000043407	SRSF5	94	72.830	Rhinopithecus_roxellana
ENSPREG00000010381	srsf5b	61	83.784	ENSSBOG00000030784	SRSF5	94	72.830	Saimiri_boliviensis_boliviensis
ENSPREG00000010381	srsf5b	63	81.771	ENSSHAG00000002871	SRSF5	96	72.794	Sarcophilus_harrisii
ENSPREG00000010381	srsf5b	90	81.879	ENSSMAG00000019728	srsf5b	91	82.373	Scophthalmus_maximus
ENSPREG00000010381	srsf5b	86	93.487	ENSSDUG00000005766	srsf5b	92	93.487	Seriola_dumerili
ENSPREG00000010381	srsf5b	89	93.309	ENSSLDG00000023255	srsf5b	92	93.309	Seriola_lalandi_dorsalis
ENSPREG00000010381	srsf5b	61	69.730	ENSSARG00000001059	SRSF5	92	56.923	Sorex_araneus
ENSPREG00000010381	srsf5b	61	83.598	ENSSPUG00000002464	SRSF5	96	69.825	Sphenodon_punctatus
ENSPREG00000010381	srsf5b	89	94.052	ENSSPAG00000015325	srsf5b	92	94.052	Stegastes_partitus
ENSPREG00000010381	srsf5b	61	82.065	ENSTGUG00000011425	SRSF5	94	73.106	Taeniopygia_guttata
ENSPREG00000010381	srsf5b	62	93.617	ENSTRUG00000017811	srsf5b	95	74.497	Takifugu_rubripes
ENSPREG00000010381	srsf5b	91	82.182	ENSTNIG00000016411	srsf5b	95	83.271	Tetraodon_nigroviridis
ENSPREG00000010381	srsf5b	63	80.729	ENSTBEG00000001972	SRSF5	96	68.727	Tupaia_belangeri
ENSPREG00000010381	srsf5b	63	82.468	ENSUMAG00000009827	SRSF5	96	65.818	Ursus_maritimus
ENSPREG00000010381	srsf5b	62	83.511	ENSXETG00000002211	srsf5	94	73.507	Xenopus_tropicalis
ENSPREG00000010381	srsf5b	100	90.066	ENSXCOG00000001570	srsf5b	100	94.040	Xiphophorus_couchianus
ENSPREG00000010381	srsf5b	100	98.675	ENSXMAG00000026416	srsf5b	100	98.675	Xiphophorus_maculatus