EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010399 (Gene tree)
Gene ID: 103467027
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 26863 bases
Position: chrLG7:6113802-6140664
Accession: 103467027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015415	RRM_5	PF13893.6	2e-07	1	2
ENSPREP00000015415	RRM_5	PF13893.6	2e-07	2	2
ENSPREP00000015415	RRM_1	PF00076.22	4.3e-40	1	3
ENSPREP00000015415	RRM_1	PF00076.22	4.3e-40	2	3
ENSPREP00000015415	RRM_1	PF00076.22	4.3e-40	3	3
ENSPREP00000015433	RRM_1	PF00076.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015590	-	858	-	ENSPREP00000015433	285 (aa)	-	-
ENSPRET00000015572	-	10584	XM_008413071	ENSPREP00000015415	3527 (aa)	XP_008411293	UPI0004A34EE2

Gene Model

Click here to download ENSPREG00000010399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010399	-	97	75.635	ENSPREG00000005357	si:ch1073-335m2.2	99	79.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010399	-	90	74.717	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSPREG00000010399	-	97	83.432	ENSAPOG00000011411	si:ch1073-335m2.2	99	83.432	Acanthochromis_polyacanthus
ENSPREG00000010399	-	88	95.506	ENSAPOG00000009853	-	87	95.531	Acanthochromis_polyacanthus
ENSPREG00000010399	-	91	73.408	ENSAMEG00000011817	SPEN	96	45.486	Ailuropoda_melanoleuca
ENSPREG00000010399	-	88	95.506	ENSAOCG00000014505	-	100	79.448	Amphiprion_ocellaris
ENSPREG00000010399	-	85	77.444	ENSAOCG00000008077	si:ch1073-335m2.2	98	77.444	Amphiprion_ocellaris
ENSPREG00000010399	-	97	83.432	ENSAPEG00000013515	si:ch1073-335m2.2	99	83.432	Amphiprion_percula
ENSPREG00000010399	-	88	95.506	ENSAPEG00000010288	-	100	79.420	Amphiprion_percula
ENSPREG00000010399	-	100	76.644	ENSATEG00000005627	-	100	76.363	Anabas_testudineus
ENSPREG00000010399	-	97	78.261	ENSATEG00000007674	si:ch1073-335m2.2	99	78.261	Anabas_testudineus
ENSPREG00000010399	-	80	71.008	ENSAPLG00000012618	SPEN	100	46.255	Anas_platyrhynchos
ENSPREG00000010399	-	81	66.406	ENSACAG00000013761	SPEN	100	43.454	Anolis_carolinensis
ENSPREG00000010399	-	81	71.250	ENSANAG00000034428	SPEN	96	44.401	Aotus_nancymaae
ENSPREG00000010399	-	95	79.070	ENSACLG00000021433	si:ch1073-335m2.2	99	74.874	Astatotilapia_calliptera
ENSPREG00000010399	-	100	76.949	ENSACLG00000016922	-	100	77.033	Astatotilapia_calliptera
ENSPREG00000010399	-	87	83.240	ENSAMXG00000012485	spen	100	53.838	Astyanax_mexicanus
ENSPREG00000010399	-	91	73.408	ENSBTAG00000018729	SPEN	97	44.948	Bos_taurus
ENSPREG00000010399	-	90	74.340	ENSCJAG00000008527	SPEN	96	44.850	Callithrix_jacchus
ENSPREG00000010399	-	91	74.157	ENSCAFG00000016132	-	91	51.694	Canis_familiaris
ENSPREG00000010399	-	91	74.157	ENSCHIG00000025070	SPEN	97	44.761	Capra_hircus
ENSPREG00000010399	-	80	45.532	ENSTSYG00000036016	SPEN	96	42.795	Carlito_syrichta
ENSPREG00000010399	-	80	71.548	ENSCAPG00000013803	SPEN	100	43.086	Cavia_aperea
ENSPREG00000010399	-	80	71.429	ENSCPOG00000014036	SPEN	96	44.800	Cavia_porcellus
ENSPREG00000010399	-	91	74.157	ENSCCAG00000020258	SPEN	96	40.942	Cebus_capucinus
ENSPREG00000010399	-	83	86.667	ENSCATG00000015079	SPEN	96	44.770	Cercocebus_atys
ENSPREG00000010399	-	80	71.429	ENSCLAG00000002018	SPEN	97	44.477	Chinchilla_lanigera
ENSPREG00000010399	-	90	74.717	ENSCSAG00000000841	SPEN	96	44.677	Chlorocebus_sabaeus
ENSPREG00000010399	-	91	73.783	ENSCPBG00000010477	SPEN	100	46.587	Chrysemys_picta_bellii
ENSPREG00000010399	-	88	68.340	ENSCANG00000034547	SPEN	90	46.853	Colobus_angolensis_palliatus
ENSPREG00000010399	-	90	75.094	ENSCGRG00001007725	Spen	97	44.948	Cricetulus_griseus_chok1gshd
ENSPREG00000010399	-	71	71.905	ENSCGRG00000010581	Spen	97	43.813	Cricetulus_griseus_crigri
ENSPREG00000010399	-	99	73.323	ENSCSEG00000003915	-	100	73.323	Cynoglossus_semilaevis
ENSPREG00000010399	-	100	87.094	ENSCVAG00000016346	-	100	87.009	Cyprinodon_variegatus
ENSPREG00000010399	-	97	75.635	ENSCVAG00000009075	si:ch1073-335m2.2	99	75.635	Cyprinodon_variegatus
ENSPREG00000010399	-	90	66.773	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSPREG00000010399	-	76	69.507	ENSDARG00000074332	si:ch1073-335m2.2	99	69.725	Danio_rerio
ENSPREG00000010399	-	91	74.906	ENSDNOG00000041948	SPEN	96	46.013	Dasypus_novemcinctus
ENSPREG00000010399	-	81	70.833	ENSDORG00000023909	Spen	96	43.864	Dipodomys_ordii
ENSPREG00000010399	-	80	70.886	ENSETEG00000016692	-	57	59.375	Echinops_telfairi
ENSPREG00000010399	-	60	63.587	ENSEBUG00000005464	-	63	66.667	Eptatretus_burgeri
ENSPREG00000010399	-	94	86.765	ENSEASG00005015911	SPEN	96	86.765	Equus_asinus_asinus
ENSPREG00000010399	-	94	86.765	ENSECAG00000008833	SPEN	96	86.765	Equus_caballus
ENSPREG00000010399	-	90	73.208	ENSEEUG00000010255	SPEN	59	88.095	Erinaceus_europaeus
ENSPREG00000010399	-	97	80.000	ENSELUG00000007726	si:ch1073-335m2.2	99	80.105	Esox_lucius
ENSPREG00000010399	-	78	70.815	ENSFDAG00000010212	SPEN	88	45.680	Fukomys_damarensis
ENSPREG00000010399	-	98	73.585	ENSFHEG00000004544	si:ch1073-335m2.2	94	73.585	Fundulus_heteroclitus
ENSPREG00000010399	-	90	95.720	ENSFHEG00000013136	-	92	94.872	Fundulus_heteroclitus
ENSPREG00000010399	-	98	74.872	ENSGMOG00000008156	si:ch1073-335m2.2	99	75.648	Gadus_morhua
ENSPREG00000010399	-	97	89.130	ENSGMOG00000008397	-	99	89.560	Gadus_morhua
ENSPREG00000010399	-	91	73.783	ENSGALG00000036932	SPEN	99	47.088	Gallus_gallus
ENSPREG00000010399	-	100	98.947	ENSGAFG00000015819	-	100	98.947	Gambusia_affinis
ENSPREG00000010399	-	90	87.547	ENSGACG00000005341	-	100	71.413	Gasterosteus_aculeatus
ENSPREG00000010399	-	91	69.884	ENSGACG00000001176	si:ch1073-335m2.2	100	40.945	Gasterosteus_aculeatus
ENSPREG00000010399	-	91	73.783	ENSGAGG00000020785	SPEN	100	47.238	Gopherus_agassizii
ENSPREG00000010399	-	90	74.717	ENSGGOG00000012041	SPEN	85	48.924	Gorilla_gorilla
ENSPREG00000010399	-	95	79.070	ENSHBUG00000023253	si:ch1073-335m2.2	99	75.377	Haplochromis_burtoni
ENSPREG00000010399	-	100	76.999	ENSHBUG00000020626	-	100	76.999	Haplochromis_burtoni
ENSPREG00000010399	-	90	74.436	ENSHGLG00000019259	SPEN	83	56.164	Heterocephalus_glaber_female
ENSPREG00000010399	-	78	70.386	ENSHGLG00100019294	SPEN	75	55.680	Heterocephalus_glaber_male
ENSPREG00000010399	-	90	76.265	ENSHCOG00000002791	-	90	76.265	Hippocampus_comes
ENSPREG00000010399	-	93	81.102	ENSHCOG00000006004	si:ch1073-335m2.2	99	81.102	Hippocampus_comes
ENSPREG00000010399	-	94	65.919	ENSIPUG00000018212	si:ch1073-335m2.2	99	65.919	Ictalurus_punctatus
ENSPREG00000010399	-	89	65.287	ENSIPUG00000021668	spen	100	52.197	Ictalurus_punctatus
ENSPREG00000010399	-	78	70.690	ENSSTOG00000021428	SPEN	97	44.468	Ictidomys_tridecemlineatus
ENSPREG00000010399	-	90	75.094	ENSJJAG00000010882	Spen	98	45.857	Jaculus_jaculus
ENSPREG00000010399	-	88	94.382	ENSKMAG00000003882	-	100	79.966	Kryptolebias_marmoratus
ENSPREG00000010399	-	97	75.127	ENSKMAG00000021725	si:ch1073-335m2.2	99	79.651	Kryptolebias_marmoratus
ENSPREG00000010399	-	97	82.249	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	Labrus_bergylta
ENSPREG00000010399	-	90	83.203	ENSLBEG00000019151	-	88	84.722	Labrus_bergylta
ENSPREG00000010399	-	84	70.653	ENSLBEG00000019129	-	100	70.653	Labrus_bergylta
ENSPREG00000010399	-	89	76.046	ENSLACG00000003258	SPEN	99	84.472	Latimeria_chalumnae
ENSPREG00000010399	-	97	84.138	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.138	Lepisosteus_oculatus
ENSPREG00000010399	-	90	66.415	ENSLAFG00000004524	SPEN	97	44.098	Loxodonta_africana
ENSPREG00000010399	-	90	74.717	ENSMFAG00000041974	SPEN	96	44.413	Macaca_fascicularis
ENSPREG00000010399	-	90	74.717	ENSMMUG00000008026	SPEN	96	44.503	Macaca_mulatta
ENSPREG00000010399	-	90	74.717	ENSMNEG00000042402	SPEN	96	44.487	Macaca_nemestrina
ENSPREG00000010399	-	90	67.170	ENSMLEG00000039293	SPEN	96	44.099	Mandrillus_leucophaeus
ENSPREG00000010399	-	90	89.313	ENSMAMG00000014536	-	87	93.855	Mastacembelus_armatus
ENSPREG00000010399	-	95	79.070	ENSMZEG00005011762	si:ch1073-335m2.2	99	74.874	Maylandia_zebra
ENSPREG00000010399	-	89	75.110	ENSMZEG00005021491	-	99	75.110	Maylandia_zebra
ENSPREG00000010399	-	91	73.783	ENSMGAG00000005180	-	85	89.683	Meleagris_gallopavo
ENSPREG00000010399	-	90	74.717	ENSMAUG00000008318	Spen	93	51.252	Mesocricetus_auratus
ENSPREG00000010399	-	90	73.962	ENSMICG00000030994	SPEN	86	48.159	Microcebus_murinus
ENSPREG00000010399	-	91	74.532	ENSMOCG00000016083	Spen	97	43.484	Microtus_ochrogaster
ENSPREG00000010399	-	90	92.578	ENSMMOG00000017059	-	90	92.578	Mola_mola
ENSPREG00000010399	-	91	73.881	ENSMODG00000003411	SPEN	100	44.664	Monodelphis_domestica
ENSPREG00000010399	-	86	94.944	ENSMALG00000008625	-	100	76.880	Monopterus_albus
ENSPREG00000010399	-	91	74.157	MGP_CAROLIEiJ_G0026745	Spen	97	44.865	Mus_caroli
ENSPREG00000010399	-	91	74.157	ENSMUSG00000040761	Spen	97	44.284	Mus_musculus
ENSPREG00000010399	-	90	74.340	MGP_PahariEiJ_G0029076	Spen	97	44.417	Mus_pahari
ENSPREG00000010399	-	91	74.157	MGP_SPRETEiJ_G0027724	Spen	97	44.871	Mus_spretus
ENSPREG00000010399	-	65	80.874	ENSMPUG00000016317	SPEN	96	44.607	Mustela_putorius_furo
ENSPREG00000010399	-	95	87.097	ENSMLUG00000010144	SPEN	94	87.097	Myotis_lucifugus
ENSPREG00000010399	-	90	74.340	ENSNGAG00000000641	Spen	97	47.883	Nannospalax_galili
ENSPREG00000010399	-	95	79.651	ENSNBRG00000005733	si:ch1073-335m2.2	99	74.874	Neolamprologus_brichardi
ENSPREG00000010399	-	85	74.037	ENSNBRG00000022090	-	100	74.303	Neolamprologus_brichardi
ENSPREG00000010399	-	81	71.667	ENSNLEG00000007652	SPEN	82	69.828	Nomascus_leucogenys
ENSPREG00000010399	-	76	82.292	ENSMEUG00000002422	SPEN	89	82.292	Notamacropus_eugenii
ENSPREG00000010399	-	80	71.730	ENSOPRG00000015800	SPEN	81	63.822	Ochotona_princeps
ENSPREG00000010399	-	90	74.436	ENSODEG00000016644	SPEN	100	42.748	Octodon_degus
ENSPREG00000010399	-	90	90.421	ENSONIG00000006573	-	99	86.745	Oreochromis_niloticus
ENSPREG00000010399	-	80	69.748	ENSOANG00000004165	-	100	70.506	Ornithorhynchus_anatinus
ENSPREG00000010399	-	90	60.300	ENSOCUG00000010840	SPEN	97	42.225	Oryctolagus_cuniculus
ENSPREG00000010399	-	87	65.183	ENSORLG00000028894	-	100	65.215	Oryzias_latipes
ENSPREG00000010399	-	87	65.527	ENSORLG00020007735	-	100	65.527	Oryzias_latipes_hni
ENSPREG00000010399	-	100	67.746	ENSORLG00015022085	-	100	67.709	Oryzias_latipes_hsok
ENSPREG00000010399	-	94	83.230	ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	Oryzias_latipes_hsok
ENSPREG00000010399	-	96	83.436	ENSOMEG00000004509	si:ch1073-335m2.2	99	81.765	Oryzias_melastigma
ENSPREG00000010399	-	100	67.372	ENSOMEG00000007639	-	100	67.202	Oryzias_melastigma
ENSPREG00000010399	-	90	74.340	ENSOGAG00000025110	SPEN	96	44.456	Otolemur_garnettii
ENSPREG00000010399	-	88	68.462	ENSOARG00000008477	SPEN	96	44.475	Ovis_aries
ENSPREG00000010399	-	81	71.250	ENSPPAG00000035690	SPEN	85	48.010	Pan_paniscus
ENSPREG00000010399	-	90	74.717	ENSPTRG00000000210	SPEN	85	48.613	Pan_troglodytes
ENSPREG00000010399	-	90	74.717	ENSPANG00000006293	SPEN	96	44.161	Papio_anubis
ENSPREG00000010399	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSPREG00000010399	-	89	81.467	ENSPKIG00000002617	SPEN	90	84.530	Paramormyrops_kingsleyae
ENSPREG00000010399	-	81	70.833	ENSPSIG00000008026	SPEN	100	45.175	Pelodiscus_sinensis
ENSPREG00000010399	-	89	66.160	ENSPEMG00000022997	Spen	97	43.914	Peromyscus_maniculatus_bairdii
ENSPREG00000010399	-	99	96.528	ENSPFOG00000024806	-	99	90.268	Poecilia_formosa
ENSPREG00000010399	-	97	75.635	ENSPLAG00000016625	si:ch1073-335m2.2	99	79.651	Poecilia_latipinna
ENSPREG00000010399	-	100	99.298	ENSPLAG00000001398	-	100	99.398	Poecilia_latipinna
ENSPREG00000010399	-	100	98.947	ENSPMEG00000006764	-	100	98.947	Poecilia_mexicana
ENSPREG00000010399	-	91	69.884	ENSPMEG00000002674	si:ch1073-335m2.2	97	75.635	Poecilia_mexicana
ENSPREG00000010399	-	90	74.717	ENSPPYG00000001834	SPEN	85	48.363	Pongo_abelii
ENSPREG00000010399	-	88	68.966	ENSPCAG00000009543	SPEN	87	68.966	Procavia_capensis
ENSPREG00000010399	-	90	73.585	ENSPCOG00000021735	SPEN	96	43.835	Propithecus_coquereli
ENSPREG00000010399	-	91	73.408	ENSPVAG00000013794	SPEN	73	66.667	Pteropus_vampyrus
ENSPREG00000010399	-	100	77.055	ENSPNYG00000012379	-	100	77.055	Pundamilia_nyererei
ENSPREG00000010399	-	95	79.070	ENSPNYG00000009042	si:ch1073-335m2.2	99	74.874	Pundamilia_nyererei
ENSPREG00000010399	-	97	73.171	ENSPNAG00000011452	si:ch1073-335m2.2	99	73.171	Pygocentrus_nattereri
ENSPREG00000010399	-	87	85.311	ENSPNAG00000020795	spen	87	79.389	Pygocentrus_nattereri
ENSPREG00000010399	-	81	71.250	ENSRNOG00000033556	Spen	97	43.801	Rattus_norvegicus
ENSPREG00000010399	-	89	68.321	ENSRBIG00000039654	SPEN	96	44.069	Rhinopithecus_bieti
ENSPREG00000010399	-	81	71.667	ENSRROG00000035686	SPEN	95	43.413	Rhinopithecus_roxellana
ENSPREG00000010399	-	81	71.667	ENSSBOG00000028770	SPEN	85	48.386	Saimiri_boliviensis_boliviensis
ENSPREG00000010399	-	83	69.636	ENSSHAG00000004960	SPEN	99	70.415	Sarcophilus_harrisii
ENSPREG00000010399	-	89	70.199	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.140	Scleropages_formosus
ENSPREG00000010399	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.684	Scleropages_formosus
ENSPREG00000010399	-	92	71.212	ENSSMAG00000000125	si:ch1073-335m2.2	99	74.747	Scophthalmus_maximus
ENSPREG00000010399	-	100	76.161	ENSSMAG00000008996	-	100	76.161	Scophthalmus_maximus
ENSPREG00000010399	-	90	91.603	ENSSDUG00000003476	-	96	96.648	Seriola_dumerili
ENSPREG00000010399	-	90	91.603	ENSSLDG00000012950	-	96	96.648	Seriola_lalandi_dorsalis
ENSPREG00000010399	-	87	43.256	ENSSPUG00000001866	-	100	43.212	Sphenodon_punctatus
ENSPREG00000010399	-	90	93.774	ENSSPAG00000006014	-	90	93.774	Stegastes_partitus
ENSPREG00000010399	-	97	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	99	84.024	Stegastes_partitus
ENSPREG00000010399	-	91	74.157	ENSSSCG00000034484	SPEN	84	48.555	Sus_scrofa
ENSPREG00000010399	-	88	93.258	ENSTRUG00000024350	-	100	70.573	Takifugu_rubripes
ENSPREG00000010399	-	87	61.328	ENSTRUG00000021008	si:ch1073-335m2.2	100	61.328	Takifugu_rubripes
ENSPREG00000010399	-	96	85.321	ENSTNIG00000010907	-	100	85.321	Tetraodon_nigroviridis
ENSPREG00000010399	-	97	71.292	ENSTNIG00000014666	si:ch1073-335m2.2	99	71.292	Tetraodon_nigroviridis
ENSPREG00000010399	-	70	77.181	ENSTBEG00000003628	SPEN	68	77.181	Tupaia_belangeri
ENSPREG00000010399	-	81	71.130	ENSTTRG00000015704	SPEN	68	74.408	Tursiops_truncatus
ENSPREG00000010399	-	97	84.483	ENSUAMG00000009600	SPEN	96	45.262	Ursus_americanus
ENSPREG00000010399	-	96	84.483	ENSUMAG00000021641	SPEN	96	44.145	Ursus_maritimus
ENSPREG00000010399	-	91	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSPREG00000010399	-	90	72.727	ENSXETG00000023114	SPEN	100	41.459	Xenopus_tropicalis
ENSPREG00000010399	-	97	75.385	ENSXCOG00000004516	si:ch1073-335m2.2	99	75.385	Xiphophorus_couchianus
ENSPREG00000010399	-	97	75.635	ENSXMAG00000029887	si:ch1073-335m2.2	99	75.635	Xiphophorus_maculatus
ENSPREG00000010399	-	100	96.882	ENSXMAG00000021384	-	100	96.882	Xiphophorus_maculatus