EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: leucine-rich repeat flightless-interacting protein 2-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7769 bases
Position: chrLG2:19247289-19255057
Accession: 103481083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015753	LRRFIP	PF09738.9	5.9e-57	1	1
ENSPREP00000015776	LRRFIP	PF09738.9	2.5e-56	1	1
ENSPREP00000015693	LRRFIP	PF09738.9	6.3e-53	1	2
ENSPREP00000015693	LRRFIP	PF09738.9	6.3e-53	2	2
ENSPREP00000015727	LRRFIP	PF09738.9	1.5e-52	1	1
ENSPREP00000015668	LRRFIP	PF09738.9	4.3e-51	1	2
ENSPREP00000015668	LRRFIP	PF09738.9	4.3e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015891	-	2159	XM_008436369	ENSPREP00000015727	719 (aa)	XP_008434591	-
ENSPRET00000015917	-	1973	XM_008436379	ENSPREP00000015753	657 (aa)	XP_008434601	-
ENSPRET00000015857	-	2171	XM_008436362	ENSPREP00000015693	723 (aa)	XP_008434584	-
ENSPRET00000015832	-	2318	XM_008436352	ENSPREP00000015668	745 (aa)	XP_008434574	-
ENSPRET00000015941	-	1955	-	ENSPREP00000015776	651 (aa)	-	-

Gene Model

Click here to download ENSPREG00000010581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010581	-	50	36.898	ENSPREG00000001389	lrrfip2	63	72.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010581	-	50	81.467	ENSAOCG00000009531	lrrfip1b	70	78.202	Amphiprion_ocellaris
ENSPREG00000010581	-	50	53.994	ENSAOCG00000009212	-	68	53.994	Amphiprion_ocellaris
ENSPREG00000010581	-	50	77.657	ENSAPEG00000007555	lrrfip1b	70	77.657	Amphiprion_percula
ENSPREG00000010581	-	50	56.675	ENSAPEG00000002932	-	72	58.333	Amphiprion_percula
ENSPREG00000010581	-	51	75.741	ENSATEG00000007628	-	69	78.431	Anabas_testudineus
ENSPREG00000010581	-	53	74.380	ENSACLG00000001232	-	57	70.455	Astatotilapia_calliptera
ENSPREG00000010581	-	62	72.093	ENSACLG00000014982	-	72	80.720	Astatotilapia_calliptera
ENSPREG00000010581	-	50	57.105	ENSAMXG00000013471	lrrfip1b	70	60.322	Astyanax_mexicanus
ENSPREG00000010581	-	51	53.528	ENSAMXG00000035379	lrrfip1a	73	53.960	Astyanax_mexicanus
ENSPREG00000010581	-	55	43.928	ENSCAFG00020024621	LRRFIP1	62	80.000	Canis_lupus_dingo
ENSPREG00000010581	-	52	56.764	ENSCSEG00000009064	-	57	68.939	Cynoglossus_semilaevis
ENSPREG00000010581	-	50	49.742	ENSCVAG00000000923	-	58	62.136	Cyprinodon_variegatus
ENSPREG00000010581	-	84	57.119	ENSCVAG00000004618	-	59	86.520	Cyprinodon_variegatus
ENSPREG00000010581	-	50	59.897	ENSDARG00000095170	lrrfip1b	69	68.627	Danio_rerio
ENSPREG00000010581	-	57	80.531	ENSEASG00005007354	LRRFIP1	59	80.531	Equus_asinus_asinus
ENSPREG00000010581	-	57	80.531	ENSECAG00000016447	LRRFIP1	50	43.389	Equus_caballus
ENSPREG00000010581	-	51	76.033	ENSELUG00000009514	lrrfip1a	64	71.970	Esox_lucius
ENSPREG00000010581	-	50	65.323	ENSELUG00000002824	-	57	83.621	Esox_lucius
ENSPREG00000010581	-	62	74.074	ENSFHEG00000000977	-	55	81.250	Fundulus_heteroclitus
ENSPREG00000010581	-	50	96.676	ENSGAFG00000000049	lrrfip1b	70	96.676	Gambusia_affinis
ENSPREG00000010581	-	52	47.103	ENSGAFG00000011211	lrrfip1a	70	45.519	Gambusia_affinis
ENSPREG00000010581	-	57	84.752	ENSHBUG00000015052	-	72	80.720	Haplochromis_burtoni
ENSPREG00000010581	-	53	53.545	ENSHCOG00000010534	LRRFIP1	71	53.865	Hippocampus_comes
ENSPREG00000010581	-	51	68.831	ENSIPUG00000012031	-	71	68.831	Ictalurus_punctatus
ENSPREG00000010581	-	52	51.429	ENSLACG00000009375	-	70	51.813	Latimeria_chalumnae
ENSPREG00000010581	-	51	83.186	ENSLOCG00000004973	lrrfip1b	63	82.456	Lepisosteus_oculatus
ENSPREG00000010581	-	50	78.462	ENSMAMG00000022660	lrrfip1b	65	64.577	Mastacembelus_armatus
ENSPREG00000010581	-	53	74.380	ENSMZEG00005013703	-	54	74.380	Maylandia_zebra
ENSPREG00000010581	-	88	78.462	ENSMZEG00005013851	-	77	52.057	Maylandia_zebra
ENSPREG00000010581	-	51	51.777	ENSMMOG00000019255	LRRFIP1	70	51.777	Mola_mola
ENSPREG00000010581	-	50	71.765	ENSMALG00000001510	lrrfip1b	63	69.360	Monopterus_albus
ENSPREG00000010581	-	75	82.308	ENSNBRG00000012090	-	66	82.308	Neolamprologus_brichardi
ENSPREG00000010581	-	53	72.093	ENSONIG00000016777	LRRFIP1	65	72.093	Oreochromis_niloticus
ENSPREG00000010581	-	64	80.282	ENSORLG00000030005	-	72	80.282	Oryzias_latipes
ENSPREG00000010581	-	51	75.781	ENSORLG00015011013	-	72	75.781	Oryzias_latipes_hsok
ENSPREG00000010581	-	51	74.293	ENSOMEG00000007133	-	70	74.293	Oryzias_melastigma
ENSPREG00000010581	-	54	57.398	ENSPCIG00000021565	-	60	73.770	Phascolarctos_cinereus
ENSPREG00000010581	-	93	83.550	ENSPLAG00000009833	-	64	98.675	Poecilia_latipinna
ENSPREG00000010581	-	50	51.380	ENSPCOG00000024174	-	57	81.416	Propithecus_coquereli
ENSPREG00000010581	-	65	71.429	ENSPNYG00000015284	-	93	37.174	Pundamilia_nyererei
ENSPREG00000010581	-	51	70.757	ENSPNAG00000009198	lrrfip1b	60	85.841	Pygocentrus_nattereri
ENSPREG00000010581	-	50	71.074	ENSSMAG00000018506	lrrfip1a	52	71.074	Scophthalmus_maximus
ENSPREG00000010581	-	82	67.617	ENSSDUG00000003894	-	71	76.864	Seriola_dumerili
ENSPREG00000010581	-	50	48.239	ENSSDUG00000006643	-	52	65.591	Seriola_dumerili
ENSPREG00000010581	-	50	79.339	ENSSLDG00000009468	lrrfip1b	70	79.339	Seriola_lalandi_dorsalis
ENSPREG00000010581	-	52	40.976	ENSVVUG00000001547	LRRFIP1	51	63.137	Vulpes_vulpes
ENSPREG00000010581	-	93	80.000	ENSXCOG00000011043	-	70	80.788	Xiphophorus_couchianus
ENSPREG00000010581	-	93	78.548	ENSXMAG00000021036	-	70	79.316	Xiphophorus_maculatus