EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010583 (Gene tree)
Gene ID: 103474929
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 15651 bases
Position: chrLG13:25022904-25038554
Accession: 103474929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015734	B3_4	PF03483.17	1.2e-27	1	1
ENSPREP00000015674	B3_4	PF03483.17	2.9e-27	1	1
ENSPREP00000015707	B3_4	PF03483.17	3e-27	1	1
ENSPREP00000015734	B5	PF03484.15	6.3e-16	1	1
ENSPREP00000015707	B5	PF03484.15	2.5e-15	1	1
ENSPREP00000015674	B5	PF03484.15	9.1e-15	1	1
ENSPREP00000015707	EF1_GNE	PF00736.19	5.5e-36	1	1
ENSPREP00000015674	EF1_GNE	PF00736.19	5.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000015898	-	1617	-	ENSPREP00000015734	538 (aa)	-	-
ENSPRET00000015871	-	3068	XM_008426208	ENSPREP00000015707	847 (aa)	XP_008424430	UPI0004A24239
ENSPRET00000015838	-	2717	-	ENSPREP00000015674	875 (aa)	-	-

Gene Model

Click here to download ENSPREG00000010583's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010583	farsb	100	70.508	ENSG00000116120	FARSB	100	75.932	Homo_sapiens
ENSPREG00000010583	farsb	100	88.325	ENSAPOG00000013072	farsb	100	88.325	Acanthochromis_polyacanthus
ENSPREG00000010583	farsb	100	70.339	ENSAMEG00000005984	FARSB	100	75.932	Ailuropoda_melanoleuca
ENSPREG00000010583	farsb	100	78.947	ENSACIG00000021623	farsb	100	87.267	Amphilophus_citrinellus
ENSPREG00000010583	farsb	100	87.618	ENSAOCG00000004912	farsb	100	87.618	Amphiprion_ocellaris
ENSPREG00000010583	farsb	100	87.618	ENSAPEG00000001153	farsb	100	87.618	Amphiprion_percula
ENSPREG00000010583	farsb	100	87.367	ENSATEG00000021441	farsb	100	87.367	Anabas_testudineus
ENSPREG00000010583	farsb	98	70.345	ENSAPLG00000010292	FARSB	98	76.034	Anas_platyrhynchos
ENSPREG00000010583	farsb	100	70.119	ENSACAG00000004769	FARSB	98	76.061	Anolis_carolinensis
ENSPREG00000010583	farsb	100	69.661	ENSANAG00000024637	FARSB	100	75.254	Aotus_nancymaae
ENSPREG00000010583	farsb	100	87.382	ENSACLG00000013951	farsb	100	89.046	Astatotilapia_calliptera
ENSPREG00000010583	farsb	83	73.948	ENSAMXG00000033881	farsb	100	81.764	Astyanax_mexicanus
ENSPREG00000010583	farsb	100	70.339	ENSBTAG00000011649	FARSB	100	75.932	Bos_taurus
ENSPREG00000010583	farsb	95	69.204	ENSBTAG00000045523	-	100	74.867	Bos_taurus
ENSPREG00000010583	farsb	100	53.716	WBGene00001498	fars-3	100	58.784	Caenorhabditis_elegans
ENSPREG00000010583	farsb	100	70.339	ENSCJAG00000012181	FARSB	100	75.763	Callithrix_jacchus
ENSPREG00000010583	farsb	100	70.678	ENSCAFG00000016094	-	100	76.271	Canis_familiaris
ENSPREG00000010583	farsb	95	76.953	ENSCAFG00020026684	FARSB	100	76.953	Canis_lupus_dingo
ENSPREG00000010583	farsb	100	70.678	ENSCHIG00000014275	FARSB	100	76.271	Capra_hircus
ENSPREG00000010583	farsb	100	70.169	ENSTSYG00000008461	FARSB	100	75.254	Carlito_syrichta
ENSPREG00000010583	farsb	95	62.783	ENSCAPG00000016436	FARSB	99	69.217	Cavia_aperea
ENSPREG00000010583	farsb	100	69.322	ENSCPOG00000013109	FARSB	100	75.593	Cavia_porcellus
ENSPREG00000010583	farsb	100	65.932	ENSCCAG00000025840	FARSB	100	71.356	Cebus_capucinus
ENSPREG00000010583	farsb	100	70.339	ENSCATG00000036168	FARSB	100	75.763	Cercocebus_atys
ENSPREG00000010583	farsb	100	70.508	ENSCLAG00000011954	FARSB	100	76.441	Chinchilla_lanigera
ENSPREG00000010583	farsb	100	70.339	ENSCSAG00000007806	FARSB	100	75.763	Chlorocebus_sabaeus
ENSPREG00000010583	farsb	79	85.227	ENSCHOG00000011785	FARSB	81	85.227	Choloepus_hoffmanni
ENSPREG00000010583	farsb	100	70.458	ENSCPBG00000019346	FARSB	98	76.740	Chrysemys_picta_bellii
ENSPREG00000010583	farsb	99	55.351	ENSCING00000004180	-	99	61.538	Ciona_intestinalis
ENSPREG00000010583	farsb	91	61.741	ENSCSAVG00000005346	-	99	61.873	Ciona_savignyi
ENSPREG00000010583	farsb	96	69.649	ENSCANG00000036239	FARSB	100	75.439	Colobus_angolensis_palliatus
ENSPREG00000010583	farsb	100	71.186	ENSCGRG00001022928	Farsb	100	76.610	Cricetulus_griseus_chok1gshd
ENSPREG00000010583	farsb	100	71.186	ENSCGRG00000001513	Farsb	100	76.610	Cricetulus_griseus_crigri
ENSPREG00000010583	farsb	100	82.513	ENSCSEG00000005415	farsb	100	88.907	Cynoglossus_semilaevis
ENSPREG00000010583	farsb	84	89.778	ENSCVAG00000018815	farsb	98	90.000	Cyprinodon_variegatus
ENSPREG00000010583	farsb	100	76.441	ENSDARG00000016864	farsb	100	83.559	Danio_rerio
ENSPREG00000010583	farsb	100	69.492	ENSDNOG00000002511	FARSB	100	75.085	Dasypus_novemcinctus
ENSPREG00000010583	farsb	100	70.000	ENSDORG00000011102	Farsb	100	75.424	Dipodomys_ordii
ENSPREG00000010583	farsb	100	57.336	FBgn0039175	beta-PheRS	100	63.912	Drosophila_melanogaster
ENSPREG00000010583	farsb	96	68.246	ENSETEG00000015080	FARSB	100	74.035	Echinops_telfairi
ENSPREG00000010583	farsb	100	61.695	ENSEBUG00000006846	farsb	100	66.271	Eptatretus_burgeri
ENSPREG00000010583	farsb	100	70.508	ENSEASG00005011297	FARSB	100	76.102	Equus_asinus_asinus
ENSPREG00000010583	farsb	91	77.914	ENSECAG00000023086	FARSB	99	76.147	Equus_caballus
ENSPREG00000010583	farsb	100	60.847	ENSEEUG00000007441	FARSB	91	72.340	Erinaceus_europaeus
ENSPREG00000010583	farsb	97	77.583	ENSELUG00000014767	farsb	99	84.764	Esox_lucius
ENSPREG00000010583	farsb	100	70.847	ENSFCAG00000026772	FARSB	100	76.441	Felis_catus
ENSPREG00000010583	farsb	96	69.420	ENSFALG00000006739	FARSB	97	75.482	Ficedula_albicollis
ENSPREG00000010583	farsb	100	70.339	ENSFDAG00000008871	FARSB	100	76.102	Fukomys_damarensis
ENSPREG00000010583	farsb	100	91.736	ENSFHEG00000020939	farsb	98	95.185	Fundulus_heteroclitus
ENSPREG00000010583	farsb	91	85.890	ENSGMOG00000013047	farsb	99	85.529	Gadus_morhua
ENSPREG00000010583	farsb	100	70.628	ENSGALG00000005236	FARSB	100	76.401	Gallus_gallus
ENSPREG00000010583	farsb	100	93.979	ENSGAFG00000020900	farsb	100	93.979	Gambusia_affinis
ENSPREG00000010583	farsb	91	87.526	ENSGACG00000000261	farsb	99	87.755	Gasterosteus_aculeatus
ENSPREG00000010583	farsb	100	70.798	ENSGAGG00000016575	FARSB	98	77.080	Gopherus_agassizii
ENSPREG00000010583	farsb	100	87.500	ENSHBUG00000022379	farsb	100	88.964	Haplochromis_burtoni
ENSPREG00000010583	farsb	100	70.508	ENSHGLG00000015965	FARSB	100	76.102	Heterocephalus_glaber_female
ENSPREG00000010583	farsb	100	70.508	ENSHGLG00100001035	FARSB	100	76.102	Heterocephalus_glaber_male
ENSPREG00000010583	farsb	90	72.948	ENSHCOG00000016462	farsb	100	81.343	Hippocampus_comes
ENSPREG00000010583	farsb	100	75.722	ENSIPUG00000002754	farsb	100	82.683	Ictalurus_punctatus
ENSPREG00000010583	farsb	100	70.508	ENSSTOG00000016169	FARSB	100	75.932	Ictidomys_tridecemlineatus
ENSPREG00000010583	farsb	100	70.678	ENSJJAG00000003267	Farsb	100	76.102	Jaculus_jaculus
ENSPREG00000010583	farsb	100	73.604	ENSKMAG00000005363	farsb	100	81.218	Kryptolebias_marmoratus
ENSPREG00000010583	farsb	100	85.950	ENSLBEG00000018127	farsb	100	85.950	Labrus_bergylta
ENSPREG00000010583	farsb	100	73.005	ENSLACG00000002551	FARSB	100	79.287	Latimeria_chalumnae
ENSPREG00000010583	farsb	100	76.231	ENSLOCG00000004136	farsb	100	83.192	Lepisosteus_oculatus
ENSPREG00000010583	farsb	100	69.831	ENSLAFG00000015659	FARSB	100	75.424	Loxodonta_africana
ENSPREG00000010583	farsb	100	70.339	ENSMFAG00000036645	FARSB	100	75.593	Macaca_fascicularis
ENSPREG00000010583	farsb	100	67.797	ENSMMUG00000007685	FARSB	100	73.220	Macaca_mulatta
ENSPREG00000010583	farsb	100	70.000	ENSMNEG00000030672	FARSB	100	75.424	Macaca_nemestrina
ENSPREG00000010583	farsb	100	70.339	ENSMLEG00000042060	FARSB	100	75.763	Mandrillus_leucophaeus
ENSPREG00000010583	farsb	100	86.926	ENSMAMG00000011835	farsb	100	86.926	Mastacembelus_armatus
ENSPREG00000010583	farsb	95	80.531	ENSMZEG00005004544	farsb	100	89.027	Maylandia_zebra
ENSPREG00000010583	farsb	94	69.589	ENSMGAG00000004670	FARSB	100	75.671	Meleagris_gallopavo
ENSPREG00000010583	farsb	79	75.000	ENSMAUG00000017805	Farsb	100	75.000	Mesocricetus_auratus
ENSPREG00000010583	farsb	100	71.356	ENSMICG00000002495	FARSB	100	76.780	Microcebus_murinus
ENSPREG00000010583	farsb	100	71.477	ENSMOCG00000003181	Farsb	100	76.910	Microtus_ochrogaster
ENSPREG00000010583	farsb	100	72.835	ENSMMOG00000006265	farsb	100	81.324	Mola_mola
ENSPREG00000010583	farsb	100	71.477	ENSMODG00000021192	FARSB	100	77.419	Monodelphis_domestica
ENSPREG00000010583	farsb	91	89.366	ENSMALG00000021188	farsb	92	90.018	Monopterus_albus
ENSPREG00000010583	farsb	100	70.508	MGP_CAROLIEiJ_G0014310	Farsb	100	76.102	Mus_caroli
ENSPREG00000010583	farsb	100	70.339	ENSMUSG00000026245	Farsb	100	75.932	Mus_musculus
ENSPREG00000010583	farsb	100	70.678	MGP_PahariEiJ_G0027548	Farsb	100	76.102	Mus_pahari
ENSPREG00000010583	farsb	100	70.339	MGP_SPRETEiJ_G0015116	Farsb	100	75.932	Mus_spretus
ENSPREG00000010583	farsb	100	70.339	ENSMPUG00000016677	FARSB	100	75.932	Mustela_putorius_furo
ENSPREG00000010583	farsb	100	71.186	ENSMLUG00000010904	FARSB	100	76.780	Myotis_lucifugus
ENSPREG00000010583	farsb	100	70.119	ENSNGAG00000014602	Farsb	100	75.722	Nannospalax_galili
ENSPREG00000010583	farsb	100	87.618	ENSNBRG00000003198	farsb	100	87.618	Neolamprologus_brichardi
ENSPREG00000010583	farsb	100	70.508	ENSNLEG00000009638	FARSB	100	75.932	Nomascus_leucogenys
ENSPREG00000010583	farsb	100	62.139	ENSMEUG00000010798	FARSB	100	67.912	Notamacropus_eugenii
ENSPREG00000010583	farsb	100	51.017	ENSOPRG00000003292	FARSB	89	67.143	Ochotona_princeps
ENSPREG00000010583	farsb	99	82.979	ENSODEG00000005451	FARSB	100	76.610	Octodon_degus
ENSPREG00000010583	farsb	100	84.211	ENSONIG00000014639	farsb	100	92.360	Oreochromis_niloticus
ENSPREG00000010583	farsb	87	76.809	ENSOANG00000015387	FARSB	98	75.285	Ornithorhynchus_anatinus
ENSPREG00000010583	farsb	91	77.301	ENSOCUG00000007828	FARSB	94	76.067	Oryctolagus_cuniculus
ENSPREG00000010583	farsb	100	86.187	ENSORLG00000009135	farsb	100	88.625	Oryzias_latipes
ENSPREG00000010583	farsb	100	86.187	ENSORLG00015001072	farsb	100	88.287	Oryzias_latipes_hsok
ENSPREG00000010583	farsb	100	85.714	ENSOMEG00000019009	farsb	100	86.418	Oryzias_melastigma
ENSPREG00000010583	farsb	100	64.883	ENSOGAG00000010125	FARSB	100	70.569	Otolemur_garnettii
ENSPREG00000010583	farsb	100	70.678	ENSOARG00000020329	FARSB	100	76.271	Ovis_aries
ENSPREG00000010583	farsb	100	70.847	ENSPPAG00000039268	FARSB	100	76.271	Pan_paniscus
ENSPREG00000010583	farsb	100	70.678	ENSPPRG00000010687	FARSB	100	76.271	Panthera_pardus
ENSPREG00000010583	farsb	100	70.508	ENSPTIG00000004299	FARSB	100	76.102	Panthera_tigris_altaica
ENSPREG00000010583	farsb	100	70.847	ENSPTRG00000012974	FARSB	100	76.271	Pan_troglodytes
ENSPREG00000010583	farsb	100	70.339	ENSPANG00000016304	FARSB	100	75.763	Papio_anubis
ENSPREG00000010583	farsb	100	73.854	ENSPKIG00000006661	farsb	100	80.985	Paramormyrops_kingsleyae
ENSPREG00000010583	farsb	99	70.017	ENSPSIG00000006248	FARSB	98	77.700	Pelodiscus_sinensis
ENSPREG00000010583	farsb	81	80.368	ENSPMGG00000002815	farsb	100	89.162	Periophthalmus_magnuspinnatus
ENSPREG00000010583	farsb	100	70.678	ENSPEMG00000003131	Farsb	100	76.102	Peromyscus_maniculatus_bairdii
ENSPREG00000010583	farsb	100	78.439	ENSPCIG00000019458	FARSB	100	78.439	Phascolarctos_cinereus
ENSPREG00000010583	farsb	100	97.285	ENSPLAG00000001104	farsb	100	98.054	Poecilia_latipinna
ENSPREG00000010583	farsb	100	97.639	ENSPMEG00000017658	farsb	100	98.249	Poecilia_mexicana
ENSPREG00000010583	farsb	100	70.508	ENSPPYG00000013221	FARSB	100	75.932	Pongo_abelii
ENSPREG00000010583	farsb	83	61.200	ENSPCAG00000002757	FARSB	85	67.800	Procavia_capensis
ENSPREG00000010583	farsb	62	92.105	ENSPCOG00000028852	FARSB	100	92.105	Propithecus_coquereli
ENSPREG00000010583	farsb	100	70.339	ENSPVAG00000006985	FARSB	100	76.102	Pteropus_vampyrus
ENSPREG00000010583	farsb	100	70.968	ENSPNYG00000011433	farsb	100	78.947	Pundamilia_nyererei
ENSPREG00000010583	farsb	100	76.910	ENSPNAG00000021802	farsb	100	83.871	Pygocentrus_nattereri
ENSPREG00000010583	farsb	100	70.508	ENSRNOG00000014119	Farsb	100	75.932	Rattus_norvegicus
ENSPREG00000010583	farsb	91	77.301	ENSRBIG00000033191	FARSB	98	75.229	Rhinopithecus_bieti
ENSPREG00000010583	farsb	100	70.339	ENSRROG00000029388	FARSB	100	75.763	Rhinopithecus_roxellana
ENSPREG00000010583	farsb	94	45.914	YLR060W	FRS1	100	45.082	Saccharomyces_cerevisiae
ENSPREG00000010583	farsb	100	63.051	ENSSBOG00000019084	FARSB	100	68.305	Saimiri_boliviensis_boliviensis
ENSPREG00000010583	farsb	89	73.640	ENSSHAG00000015752	FARSB	99	70.932	Sarcophilus_harrisii
ENSPREG00000010583	farsb	100	73.514	ENSSFOG00015007850	farsb	100	80.645	Scleropages_formosus
ENSPREG00000010583	farsb	100	86.118	ENSSMAG00000020668	farsb	100	88.964	Scophthalmus_maximus
ENSPREG00000010583	farsb	98	88.186	ENSSDUG00000009685	farsb	100	88.186	Seriola_dumerili
ENSPREG00000010583	farsb	100	88.588	ENSSLDG00000025206	farsb	100	88.588	Seriola_lalandi_dorsalis
ENSPREG00000010583	farsb	57	83.333	ENSSARG00000005655	-	66	76.027	Sorex_araneus
ENSPREG00000010583	farsb	95	73.333	ENSSPUG00000002245	FARSB	100	73.333	Sphenodon_punctatus
ENSPREG00000010583	farsb	100	87.397	ENSSPAG00000007367	farsb	100	87.397	Stegastes_partitus
ENSPREG00000010583	farsb	100	64.576	ENSSSCG00000032016	-	100	70.000	Sus_scrofa
ENSPREG00000010583	farsb	100	76.394	ENSSSCG00000016226	-	100	76.394	Sus_scrofa
ENSPREG00000010583	farsb	96	69.069	ENSTGUG00000007788	FARSB	100	75.263	Taeniopygia_guttata
ENSPREG00000010583	farsb	100	82.054	ENSTRUG00000009483	farsb	100	82.054	Takifugu_rubripes
ENSPREG00000010583	farsb	100	79.082	ENSTNIG00000014310	farsb	100	85.739	Tetraodon_nigroviridis
ENSPREG00000010583	farsb	91	74.419	ENSTBEG00000003136	FARSB	84	74.419	Tupaia_belangeri
ENSPREG00000010583	farsb	87	66.667	ENSTTRG00000009082	FARSB	88	76.382	Tursiops_truncatus
ENSPREG00000010583	farsb	83	65.070	ENSUAMG00000024613	FARSB	99	71.657	Ursus_americanus
ENSPREG00000010583	farsb	100	70.169	ENSUMAG00000017995	FARSB	100	75.763	Ursus_maritimus
ENSPREG00000010583	farsb	91	73.116	ENSVPAG00000006844	FARSB	100	72.325	Vicugna_pacos
ENSPREG00000010583	farsb	96	77.413	ENSVVUG00000024025	FARSB	100	76.441	Vulpes_vulpes
ENSPREG00000010583	farsb	100	69.779	ENSXETG00000002934	farsb	100	75.804	Xenopus_tropicalis
ENSPREG00000010583	farsb	100	95.632	ENSXMAG00000008280	farsb	100	95.632	Xiphophorus_maculatus