EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000010709 (Gene tree)
Gene ID: 103463361
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10223 bases
Position: chrLG4:11153983-11164205
Accession: 103463361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000015867	R3H	PF01424.22	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016032	-	5462	XM_008406660	ENSPREP00000015867	254 (aa)	XP_008404882	UPI0004A468AA

Gene Model

Click here to download ENSPREG00000010709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010709	r3hdm4	93	56.225	ENSG00000198858	R3HDM4	97	55.833	Homo_sapiens
ENSPREG00000010709	r3hdm4	92	57.741	ENSAMEG00000003001	R3HDM4	97	57.741	Ailuropoda_melanoleuca
ENSPREG00000010709	r3hdm4	100	86.328	ENSACIG00000004672	r3hdm4	100	86.328	Amphilophus_citrinellus
ENSPREG00000010709	r3hdm4	98	80.556	ENSATEG00000015913	r3hdm4	99	80.556	Anabas_testudineus
ENSPREG00000010709	r3hdm4	92	57.143	ENSANAG00000029748	R3HDM4	98	57.143	Aotus_nancymaae
ENSPREG00000010709	r3hdm4	93	56.627	ENSBTAG00000046406	R3HDM4	100	53.846	Bos_taurus
ENSPREG00000010709	r3hdm4	93	56.452	ENSCJAG00000020114	R3HDM4	92	56.452	Callithrix_jacchus
ENSPREG00000010709	r3hdm4	92	57.563	ENSCAFG00000019665	R3HDM4	87	57.563	Canis_familiaris
ENSPREG00000010709	r3hdm4	92	57.983	ENSCAFG00020016880	R3HDM4	87	57.983	Canis_lupus_dingo
ENSPREG00000010709	r3hdm4	100	54.212	ENSCHIG00000020110	R3HDM4	100	54.212	Capra_hircus
ENSPREG00000010709	r3hdm4	92	56.723	ENSCCAG00000019955	R3HDM4	86	56.723	Cebus_capucinus
ENSPREG00000010709	r3hdm4	100	53.875	ENSCATG00000037269	R3HDM4	100	54.613	Cercocebus_atys
ENSPREG00000010709	r3hdm4	92	56.540	ENSCLAG00000007094	R3HDM4	97	56.540	Chinchilla_lanigera
ENSPREG00000010709	r3hdm4	100	54.444	ENSCSAG00000012574	R3HDM4	100	54.444	Chlorocebus_sabaeus
ENSPREG00000010709	r3hdm4	100	60.000	ENSCPBG00000009805	R3HDM4	100	60.000	Chrysemys_picta_bellii
ENSPREG00000010709	r3hdm4	92	57.741	ENSCANG00000040439	R3HDM4	83	57.741	Colobus_angolensis_palliatus
ENSPREG00000010709	r3hdm4	91	56.118	ENSCGRG00001021650	R3hdm4	89	56.118	Cricetulus_griseus_chok1gshd
ENSPREG00000010709	r3hdm4	91	56.118	ENSCGRG00000013169	R3hdm4	89	56.118	Cricetulus_griseus_crigri
ENSPREG00000010709	r3hdm4	100	75.294	ENSCSEG00000018211	r3hdm4	99	75.294	Cynoglossus_semilaevis
ENSPREG00000010709	r3hdm4	100	91.373	ENSCVAG00000017127	r3hdm4	100	91.373	Cyprinodon_variegatus
ENSPREG00000010709	r3hdm4	91	56.067	ENSDORG00000006605	R3hdm4	96	56.067	Dipodomys_ordii
ENSPREG00000010709	r3hdm4	92	57.143	ENSEASG00005021556	R3HDM4	86	57.143	Equus_asinus_asinus
ENSPREG00000010709	r3hdm4	92	57.143	ENSECAG00000000003	R3HDM4	87	57.143	Equus_caballus
ENSPREG00000010709	r3hdm4	93	57.028	ENSFCAG00000042437	R3HDM4	92	57.028	Felis_catus
ENSPREG00000010709	r3hdm4	90	62.069	ENSFALG00000013938	R3HDM4	96	62.069	Ficedula_albicollis
ENSPREG00000010709	r3hdm4	92	56.303	ENSFDAG00000017040	R3HDM4	97	56.303	Fukomys_damarensis
ENSPREG00000010709	r3hdm4	100	91.373	ENSFHEG00000017636	r3hdm4	100	91.373	Fundulus_heteroclitus
ENSPREG00000010709	r3hdm4	95	71.074	ENSGMOG00000001231	r3hdm4	100	71.074	Gadus_morhua
ENSPREG00000010709	r3hdm4	91	60.338	ENSGALG00000001998	R3HDM4	90	60.338	Gallus_gallus
ENSPREG00000010709	r3hdm4	100	95.686	ENSGAFG00000004173	r3hdm4	100	95.686	Gambusia_affinis
ENSPREG00000010709	r3hdm4	100	60.000	ENSGAGG00000019698	R3HDM4	100	60.000	Gopherus_agassizii
ENSPREG00000010709	r3hdm4	92	57.563	ENSGGOG00000008040	R3HDM4	97	57.563	Gorilla_gorilla
ENSPREG00000010709	r3hdm4	100	85.938	ENSHBUG00000014810	r3hdm4	100	85.938	Haplochromis_burtoni
ENSPREG00000010709	r3hdm4	92	55.462	ENSHGLG00000016194	R3HDM4	88	55.462	Heterocephalus_glaber_female
ENSPREG00000010709	r3hdm4	99	78.039	ENSHCOG00000008422	r3hdm4	99	78.039	Hippocampus_comes
ENSPREG00000010709	r3hdm4	100	67.442	ENSIPUG00000006716	r3hdm4	100	67.442	Ictalurus_punctatus
ENSPREG00000010709	r3hdm4	92	55.882	ENSSTOG00000023015	R3HDM4	97	55.882	Ictidomys_tridecemlineatus
ENSPREG00000010709	r3hdm4	91	55.745	ENSJJAG00000012475	R3hdm4	89	55.745	Jaculus_jaculus
ENSPREG00000010709	r3hdm4	100	86.328	ENSKMAG00000005853	r3hdm4	100	86.328	Kryptolebias_marmoratus
ENSPREG00000010709	r3hdm4	100	82.812	ENSLBEG00000000730	r3hdm4	100	82.812	Labrus_bergylta
ENSPREG00000010709	r3hdm4	100	61.450	ENSLACG00000016445	R3HDM4	100	61.450	Latimeria_chalumnae
ENSPREG00000010709	r3hdm4	100	68.582	ENSLOCG00000002423	r3hdm4	100	68.966	Lepisosteus_oculatus
ENSPREG00000010709	r3hdm4	91	56.780	ENSLAFG00000017796	R3HDM4	91	56.780	Loxodonta_africana
ENSPREG00000010709	r3hdm4	100	54.815	ENSMFAG00000044131	R3HDM4	100	54.815	Macaca_fascicularis
ENSPREG00000010709	r3hdm4	87	58.222	ENSMMUG00000009682	R3HDM4	90	58.222	Macaca_mulatta
ENSPREG00000010709	r3hdm4	92	57.741	ENSMNEG00000044115	R3HDM4	96	57.741	Macaca_nemestrina
ENSPREG00000010709	r3hdm4	93	55.967	ENSMLEG00000035693	R3HDM4	89	56.790	Mandrillus_leucophaeus
ENSPREG00000010709	r3hdm4	87	81.166	ENSMAMG00000005652	r3hdm4	91	81.166	Mastacembelus_armatus
ENSPREG00000010709	r3hdm4	89	56.223	ENSMAUG00000010611	R3hdm4	90	56.223	Mesocricetus_auratus
ENSPREG00000010709	r3hdm4	100	53.137	ENSMICG00000010124	R3HDM4	100	53.137	Microcebus_murinus
ENSPREG00000010709	r3hdm4	91	55.319	ENSMOCG00000002646	R3hdm4	89	56.356	Microtus_ochrogaster
ENSPREG00000010709	r3hdm4	100	81.961	ENSMMOG00000008253	r3hdm4	100	81.961	Mola_mola
ENSPREG00000010709	r3hdm4	89	59.565	ENSMODG00000005698	R3HDM4	99	59.565	Monodelphis_domestica
ENSPREG00000010709	r3hdm4	100	80.469	ENSMALG00000018856	r3hdm4	100	80.469	Monopterus_albus
ENSPREG00000010709	r3hdm4	99	52.091	MGP_CAROLIEiJ_G0015551	R3hdm4	99	53.232	Mus_caroli
ENSPREG00000010709	r3hdm4	99	52.107	ENSMUSG00000035781	R3hdm4	99	53.257	Mus_musculus
ENSPREG00000010709	r3hdm4	99	52.471	MGP_PahariEiJ_G0030964	R3hdm4	99	53.612	Mus_pahari
ENSPREG00000010709	r3hdm4	99	52.852	MGP_SPRETEiJ_G0016369	-	84	53.992	Mus_spretus
ENSPREG00000010709	r3hdm4	93	58.436	ENSMPUG00000009394	R3HDM4	90	58.436	Mustela_putorius_furo
ENSPREG00000010709	r3hdm4	100	85.156	ENSNBRG00000004438	r3hdm4	100	85.156	Neolamprologus_brichardi
ENSPREG00000010709	r3hdm4	87	53.913	ENSNLEG00000001022	R3HDM4	99	53.913	Nomascus_leucogenys
ENSPREG00000010709	r3hdm4	92	57.983	ENSMEUG00000011020	R3HDM4	99	57.983	Notamacropus_eugenii
ENSPREG00000010709	r3hdm4	92	56.540	ENSODEG00000011745	R3HDM4	88	56.540	Octodon_degus
ENSPREG00000010709	r3hdm4	100	85.547	ENSONIG00000012675	r3hdm4	92	85.547	Oreochromis_niloticus
ENSPREG00000010709	r3hdm4	100	83.529	ENSOMEG00000003005	r3hdm4	100	83.529	Oryzias_melastigma
ENSPREG00000010709	r3hdm4	91	56.780	ENSOGAG00000025656	R3HDM4	89	56.780	Otolemur_garnettii
ENSPREG00000010709	r3hdm4	92	57.143	ENSOARG00000009945	R3HDM4	97	57.143	Ovis_aries
ENSPREG00000010709	r3hdm4	92	57.143	ENSPPAG00000042371	R3HDM4	97	57.143	Pan_paniscus
ENSPREG00000010709	r3hdm4	100	54.815	ENSPANG00000015203	R3HDM4	100	54.815	Papio_anubis
ENSPREG00000010709	r3hdm4	100	62.977	ENSPKIG00000007421	r3hdm4	100	64.504	Paramormyrops_kingsleyae
ENSPREG00000010709	r3hdm4	100	73.438	ENSPMGG00000020467	r3hdm4	100	73.438	Periophthalmus_magnuspinnatus
ENSPREG00000010709	r3hdm4	91	57.872	ENSPEMG00000008365	Tmem259	97	57.872	Peromyscus_maniculatus_bairdii
ENSPREG00000010709	r3hdm4	100	98.425	ENSPFOG00000003199	r3hdm4	100	98.425	Poecilia_formosa
ENSPREG00000010709	r3hdm4	100	98.031	ENSPMEG00000014183	r3hdm4	100	98.031	Poecilia_mexicana
ENSPREG00000010709	r3hdm4	92	57.203	ENSPPYG00000009297	R3HDM4	88	57.203	Pongo_abelii
ENSPREG00000010709	r3hdm4	58	60.265	ENSPCAG00000010997	R3HDM4	55	60.265	Procavia_capensis
ENSPREG00000010709	r3hdm4	92	57.563	ENSPCOG00000016785	R3HDM4	88	57.563	Propithecus_coquereli
ENSPREG00000010709	r3hdm4	100	85.938	ENSPNYG00000017489	r3hdm4	100	85.938	Pundamilia_nyererei
ENSPREG00000010709	r3hdm4	99	52.075	ENSRNOG00000011489	R3hdm4	99	53.030	Rattus_norvegicus
ENSPREG00000010709	r3hdm4	92	57.741	ENSRROG00000028842	R3HDM4	88	57.741	Rhinopithecus_roxellana
ENSPREG00000010709	r3hdm4	92	56.612	ENSSBOG00000019298	R3HDM4	73	56.627	Saimiri_boliviensis_boliviensis
ENSPREG00000010709	r3hdm4	57	60.274	ENSSHAG00000003036	-	100	60.274	Sarcophilus_harrisii
ENSPREG00000010709	r3hdm4	97	69.758	ENSSFOG00015020574	r3hdm4	91	69.478	Scleropages_formosus
ENSPREG00000010709	r3hdm4	100	82.422	ENSSMAG00000021090	r3hdm4	74	82.422	Scophthalmus_maximus
ENSPREG00000010709	r3hdm4	100	85.547	ENSSDUG00000008488	r3hdm4	100	85.547	Seriola_dumerili
ENSPREG00000010709	r3hdm4	100	85.156	ENSSLDG00000025328	r3hdm4	100	85.156	Seriola_lalandi_dorsalis
ENSPREG00000010709	r3hdm4	93	60.417	ENSSPUG00000005434	R3HDM4	93	60.417	Sphenodon_punctatus
ENSPREG00000010709	r3hdm4	99	79.688	ENSSPAG00000002562	r3hdm4	99	79.688	Stegastes_partitus
ENSPREG00000010709	r3hdm4	93	57.430	ENSSSCG00000013419	R3HDM4	91	57.430	Sus_scrofa
ENSPREG00000010709	r3hdm4	77	54.455	ENSTGUG00000000663	R3HDM4	97	54.950	Taeniopygia_guttata
ENSPREG00000010709	r3hdm4	92	57.627	ENSTTRG00000001470	R3HDM4	97	57.627	Tursiops_truncatus
ENSPREG00000010709	r3hdm4	93	52.419	ENSUAMG00000005751	R3HDM4	100	57.778	Ursus_americanus
ENSPREG00000010709	r3hdm4	93	56.627	ENSVVUG00000022685	R3HDM4	91	56.627	Vulpes_vulpes
ENSPREG00000010709	r3hdm4	97	46.371	ENSXETG00000033624	R3HDM4	96	46.371	Xenopus_tropicalis
ENSPREG00000010709	r3hdm4	100	94.922	ENSXCOG00000005127	r3hdm4	100	94.922	Xiphophorus_couchianus
ENSPREG00000010709	r3hdm4	100	95.294	ENSXMAG00000022875	r3hdm4	100	95.294	Xiphophorus_maculatus