EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010813 (Gene tree)
Gene ID: 103469420
Gene Symbol: si:dkey-208k4.2
Alias: fi35c12|wu:fi35c12
Full Name: P43 5S RNA-binding protein-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3985 bases
Position: chrLG8:26590326-26594310
Accession: 103469420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016033	zf-C2H2	PF00096.26	4.6e-20	1	3
ENSPREP00000016033	zf-C2H2	PF00096.26	4.6e-20	2	3
ENSPREP00000016033	zf-C2H2	PF00096.26	4.6e-20	3	3
ENSPREP00000016033	zf-met	PF12874.7	6.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016199	-	1104	XM_008417076	ENSPREP00000016033	367 (aa)	XP_008415298	-

Gene Model

Click here to download ENSPREG00000010813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010813	si:dkey-208k4.2	87	37.647	ENSPREG00000014127	-	81	37.647
ENSPREG00000010813	si:dkey-208k4.2	87	31.179	ENSPREG00000014340	-	77	37.069
ENSPREG00000010813	si:dkey-208k4.2	84	36.522	ENSPREG00000013719	-	72	30.932
ENSPREG00000010813	si:dkey-208k4.2	87	32.927	ENSPREG00000014477	-	92	30.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010813	si:dkey-208k4.2	97	74.860	ENSKMAG00000020467	si:dkey-208k4.2	99	74.860	Kryptolebias_marmoratus
ENSPREG00000010813	si:dkey-208k4.2	98	82.123	ENSXCOG00000016471	si:dkey-208k4.2	98	82.123	Xiphophorus_couchianus