EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000010838 (Gene tree)
Gene ID: 103475429
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3592 bases
Position: chrLG2:4760166-4763757
Accession: 103475429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016051	RNase_Zc3h12a	PF11977.8	2.9e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016219	-	2865	XM_008427031	ENSPREP00000016051	931 (aa)	XP_008425253	UPI0004A2D1B8

Gene Model

Click here to download ENSPREG00000010838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000010838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000010838	-	85	48.058	ENSPREG00000001607	-	73	78.414
ENSPREG00000010838	-	90	43.721	ENSPREG00000020794	zc3h12b	50	65.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000010838	-	79	79.365	ENSAPOG00000015355	-	82	79.630	Acanthochromis_polyacanthus
ENSPREG00000010838	-	84	48.807	ENSAPOG00000001632	-	84	67.308	Acanthochromis_polyacanthus
ENSPREG00000010838	-	100	67.797	ENSACIG00000001362	-	97	69.588	Amphilophus_citrinellus
ENSPREG00000010838	-	99	77.859	ENSAOCG00000003866	-	96	84.825	Amphiprion_ocellaris
ENSPREG00000010838	-	100	71.878	ENSAPEG00000005727	-	99	82.478	Amphiprion_percula
ENSPREG00000010838	-	73	75.687	ENSAPEG00000018582	-	99	82.456	Amphiprion_percula
ENSPREG00000010838	-	100	75.748	ENSATEG00000004134	-	100	76.883	Anabas_testudineus
ENSPREG00000010838	-	99	42.928	ENSATEG00000002260	-	83	78.298	Anabas_testudineus
ENSPREG00000010838	-	100	75.514	ENSACLG00000027924	-	100	75.951	Astatotilapia_calliptera
ENSPREG00000010838	-	64	53.018	ENSACLG00000018493	-	99	44.262	Astatotilapia_calliptera
ENSPREG00000010838	-	87	72.861	ENSCSEG00000010073	-	98	74.037	Cynoglossus_semilaevis
ENSPREG00000010838	-	65	51.567	ENSCSEG00000008542	-	68	52.100	Cynoglossus_semilaevis
ENSPREG00000010838	-	100	83.915	ENSCVAG00000002328	-	100	83.598	Cyprinodon_variegatus
ENSPREG00000010838	-	65	55.395	ENSELUG00000005470	-	100	45.998	Esox_lucius
ENSPREG00000010838	-	85	55.871	ENSELUG00000009319	-	95	55.583	Esox_lucius
ENSPREG00000010838	-	100	81.915	ENSFHEG00000021225	-	100	89.796	Fundulus_heteroclitus
ENSPREG00000010838	-	73	45.755	ENSGMOG00000017975	-	100	46.132	Gadus_morhua
ENSPREG00000010838	-	100	93.248	ENSGAFG00000005290	-	100	92.819	Gambusia_affinis
ENSPREG00000010838	-	73	69.242	ENSGACG00000014201	-	100	70.117	Gasterosteus_aculeatus
ENSPREG00000010838	-	73	46.495	ENSGACG00000001339	-	99	45.428	Gasterosteus_aculeatus
ENSPREG00000010838	-	100	75.309	ENSHBUG00000006831	-	100	75.848	Haplochromis_burtoni
ENSPREG00000010838	-	100	61.579	ENSHCOG00000008878	-	99	81.250	Hippocampus_comes
ENSPREG00000010838	-	100	78.390	ENSKMAG00000011694	-	100	78.602	Kryptolebias_marmoratus
ENSPREG00000010838	-	97	74.622	ENSLBEG00000012554	-	99	78.598	Labrus_bergylta
ENSPREG00000010838	-	99	42.955	ENSLBEG00000012710	-	99	44.533	Labrus_bergylta
ENSPREG00000010838	-	100	74.845	ENSLBEG00000003547	-	100	74.793	Labrus_bergylta
ENSPREG00000010838	-	55	57.357	ENSLACG00000017365	ZC3H12A	57	60.989	Latimeria_chalumnae
ENSPREG00000010838	-	92	75.993	ENSMAMG00000021794	-	94	88.235	Mastacembelus_armatus
ENSPREG00000010838	-	99	43.924	ENSMAMG00000020372	-	99	44.174	Mastacembelus_armatus
ENSPREG00000010838	-	64	53.018	ENSMZEG00005019137	-	90	67.532	Maylandia_zebra
ENSPREG00000010838	-	100	75.514	ENSMZEG00005007718	-	100	75.951	Maylandia_zebra
ENSPREG00000010838	-	99	44.813	ENSMMOG00000019526	-	93	43.905	Mola_mola
ENSPREG00000010838	-	94	73.163	ENSMMOG00000005728	-	98	78.934	Mola_mola
ENSPREG00000010838	-	100	73.760	ENSMALG00000010501	-	100	74.508	Monopterus_albus
ENSPREG00000010838	-	100	75.412	ENSNBRG00000006978	-	100	75.848	Neolamprologus_brichardi
ENSPREG00000010838	-	64	51.307	ENSNBRG00000012175	-	90	68.182	Neolamprologus_brichardi
ENSPREG00000010838	-	100	75.642	ENSONIG00000012268	-	100	76.283	Oreochromis_niloticus
ENSPREG00000010838	-	100	64.706	ENSORLG00000029243	-	99	79.545	Oryzias_latipes
ENSPREG00000010838	-	100	72.601	ENSORLG00020017005	-	100	73.134	Oryzias_latipes_hni
ENSPREG00000010838	-	100	71.809	ENSORLG00015015211	-	100	72.322	Oryzias_latipes_hsok
ENSPREG00000010838	-	100	73.093	ENSOMEG00000006666	-	100	73.629	Oryzias_melastigma
ENSPREG00000010838	-	65	79.048	ENSPMGG00000009790	-	95	81.544	Periophthalmus_magnuspinnatus
ENSPREG00000010838	-	57	57.637	ENSPMGG00000020126	-	56	57.469	Periophthalmus_magnuspinnatus
ENSPREG00000010838	-	100	97.210	ENSPLAG00000009867	-	100	97.210	Poecilia_latipinna
ENSPREG00000010838	-	100	97.318	ENSPMEG00000006624	-	100	97.318	Poecilia_mexicana
ENSPREG00000010838	-	85	48.297	ENSPMEG00000011676	-	52	59.751	Poecilia_mexicana
ENSPREG00000010838	-	99	43.938	ENSSMAG00000007258	-	99	43.504	Scophthalmus_maximus
ENSPREG00000010838	-	100	75.415	ENSSMAG00000007545	-	100	75.726	Scophthalmus_maximus
ENSPREG00000010838	-	100	76.899	ENSSDUG00000021864	-	100	77.515	Seriola_dumerili
ENSPREG00000010838	-	99	44.323	ENSSDUG00000013237	-	90	66.000	Seriola_dumerili
ENSPREG00000010838	-	100	77.002	ENSSLDG00000012268	-	100	77.515	Seriola_lalandi_dorsalis
ENSPREG00000010838	-	99	44.956	ENSSLDG00000004886	-	99	44.892	Seriola_lalandi_dorsalis
ENSPREG00000010838	-	99	46.000	ENSSPAG00000001850	-	99	44.578	Stegastes_partitus
ENSPREG00000010838	-	100	76.742	ENSSPAG00000009485	-	100	77.492	Stegastes_partitus
ENSPREG00000010838	-	99	71.757	ENSTRUG00000022519	-	99	71.862	Takifugu_rubripes
ENSPREG00000010838	-	74	67.622	ENSTNIG00000014519	-	100	81.915	Tetraodon_nigroviridis
ENSPREG00000010838	-	99	44.767	ENSXMAG00000014715	-	83	79.913	Xiphophorus_maculatus
ENSPREG00000010838	-	100	95.489	ENSXMAG00000027171	-	100	95.489	Xiphophorus_maculatus