EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011044 (Gene tree)
Gene ID: 103480526
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 31525 bases
Position: chrLG18:8515475-8546999
Accession: 103480526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016390	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016568	-	5493	XM_008435497	ENSPREP00000016390	1830 (aa)	XP_008433719	-

Gene Model

Click here to download ENSPREG00000011044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011044	chd3	91	72.691	ENSPREG00000011359	-	84	79.630
ENSPREG00000011044	chd3	50	36.667	ENSPREG00000022653	chd6	93	44.424
ENSPREG00000011044	chd3	88	70.390	ENSPREG00000014285	-	83	73.596
ENSPREG00000011044	chd3	90	83.333	ENSPREG00000001202	chd4a	96	67.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011044	chd3	99	77.942	ENSG00000170004	CHD3	89	84.502	Homo_sapiens
ENSPREG00000011044	chd3	86	89.664	ENSAPOG00000005614	chd3	97	89.270	Acanthochromis_polyacanthus
ENSPREG00000011044	chd3	69	85.120	ENSAMEG00000003025	-	89	87.027	Ailuropoda_melanoleuca
ENSPREG00000011044	chd3	86	92.205	ENSACIG00000019671	chd3	99	91.714	Amphilophus_citrinellus
ENSPREG00000011044	chd3	97	94.502	ENSAOCG00000023784	chd3	99	92.351	Amphiprion_ocellaris
ENSPREG00000011044	chd3	97	94.845	ENSAPEG00000006341	chd3	89	97.101	Amphiprion_percula
ENSPREG00000011044	chd3	97	92.808	ENSATEG00000000848	chd3	99	85.138	Anabas_testudineus
ENSPREG00000011044	chd3	97	77.813	ENSACAG00000004276	CHD3	89	85.185	Anolis_carolinensis
ENSPREG00000011044	chd3	96	78.933	ENSANAG00000034323	CHD3	91	84.502	Aotus_nancymaae
ENSPREG00000011044	chd3	97	90.439	ENSACLG00000009222	chd3	98	90.995	Astatotilapia_calliptera
ENSPREG00000011044	chd3	99	78.660	ENSBTAG00000014377	CHD3	91	81.533	Bos_taurus
ENSPREG00000011044	chd3	99	77.942	ENSCJAG00000014766	CHD3	89	84.502	Callithrix_jacchus
ENSPREG00000011044	chd3	99	78.309	ENSCAFG00000016859	CHD3	89	84.133	Canis_familiaris
ENSPREG00000011044	chd3	96	80.014	ENSCAFG00020007422	CHD3	91	84.133	Canis_lupus_dingo
ENSPREG00000011044	chd3	99	78.585	ENSCHIG00000016737	CHD3	91	80.769	Capra_hircus
ENSPREG00000011044	chd3	99	78.236	ENSTSYG00000035658	CHD3	90	84.502	Carlito_syrichta
ENSPREG00000011044	chd3	99	75.179	ENSCAPG00000014864	CHD3	89	80.488	Cavia_aperea
ENSPREG00000011044	chd3	99	77.922	ENSCPOG00000022653	CHD3	90	80.488	Cavia_porcellus
ENSPREG00000011044	chd3	99	77.942	ENSCCAG00000034792	CHD3	90	84.502	Cebus_capucinus
ENSPREG00000011044	chd3	99	79.301	ENSCATG00000041717	CHD3	89	84.502	Cercocebus_atys
ENSPREG00000011044	chd3	99	78.391	ENSCLAG00000010523	CHD3	90	84.133	Chinchilla_lanigera
ENSPREG00000011044	chd3	99	79.445	ENSCSAG00000011122	CHD3	90	84.502	Chlorocebus_sabaeus
ENSPREG00000011044	chd3	91	78.388	ENSCPBG00000011966	CHD3	99	79.075	Chrysemys_picta_bellii
ENSPREG00000011044	chd3	99	79.301	ENSCANG00000037641	CHD3	91	84.502	Colobus_angolensis_palliatus
ENSPREG00000011044	chd3	99	77.547	ENSCGRG00001011306	Chd3	97	75.266	Cricetulus_griseus_chok1gshd
ENSPREG00000011044	chd3	94	77.540	ENSCGRG00000007878	Chd3	85	80.332	Cricetulus_griseus_crigri
ENSPREG00000011044	chd3	97	87.625	ENSCSEG00000004489	chd3	98	88.612	Cynoglossus_semilaevis
ENSPREG00000011044	chd3	94	90.544	ENSCVAG00000007293	chd3	99	90.544	Cyprinodon_variegatus
ENSPREG00000011044	chd3	97	84.586	ENSDARG00000021405	chd3	98	84.972	Danio_rerio
ENSPREG00000011044	chd3	90	86.698	ENSDNOG00000047846	CHD3	64	88.235	Dasypus_novemcinctus
ENSPREG00000011044	chd3	99	77.857	ENSDORG00000010713	Chd3	90	84.328	Dipodomys_ordii
ENSPREG00000011044	chd3	97	74.051	ENSETEG00000017733	CHD3	92	83.333	Echinops_telfairi
ENSPREG00000011044	chd3	75	74.885	ENSEBUG00000008310	chd3	89	75.046	Eptatretus_burgeri
ENSPREG00000011044	chd3	93	80.675	ENSEASG00005019360	CHD3	91	84.133	Equus_asinus_asinus
ENSPREG00000011044	chd3	93	80.675	ENSECAG00000010051	CHD3	91	84.502	Equus_caballus
ENSPREG00000011044	chd3	88	89.796	ENSEEUG00000015205	CHD3	82	89.796	Erinaceus_europaeus
ENSPREG00000011044	chd3	86	82.414	ENSELUG00000019499	chd3	99	81.779	Esox_lucius
ENSPREG00000011044	chd3	99	78.488	ENSFCAG00000009629	CHD3	87	80.851	Felis_catus
ENSPREG00000011044	chd3	96	80.041	ENSFDAG00000008220	CHD3	86	83.764	Fukomys_damarensis
ENSPREG00000011044	chd3	96	79.801	ENSGMOG00000013599	chd3	90	86.585	Gadus_morhua
ENSPREG00000011044	chd3	63	94.978	ENSGAFG00000004055	chd3	99	94.978	Gambusia_affinis
ENSPREG00000011044	chd3	97	89.078	ENSGACG00000019275	chd3	93	91.071	Gasterosteus_aculeatus
ENSPREG00000011044	chd3	75	78.318	ENSGAGG00000013164	CHD3	99	76.349	Gopherus_agassizii
ENSPREG00000011044	chd3	99	77.942	ENSGGOG00000013496	CHD3	91	84.502	Gorilla_gorilla
ENSPREG00000011044	chd3	99	78.326	ENSHGLG00000012017	CHD3	90	84.133	Heterocephalus_glaber_female
ENSPREG00000011044	chd3	88	81.720	ENSHGLG00100013902	CHD3	89	86.957	Heterocephalus_glaber_male
ENSPREG00000011044	chd3	96	87.548	ENSHCOG00000010170	chd3	89	93.534	Hippocampus_comes
ENSPREG00000011044	chd3	92	81.243	ENSIPUG00000003271	chd3	97	81.156	Ictalurus_punctatus
ENSPREG00000011044	chd3	99	78.050	ENSSTOG00000025907	CHD3	97	75.480	Ictidomys_tridecemlineatus
ENSPREG00000011044	chd3	99	78.309	ENSJJAG00000017633	Chd3	97	75.359	Jaculus_jaculus
ENSPREG00000011044	chd3	97	90.869	ENSKMAG00000019292	chd3	98	90.702	Kryptolebias_marmoratus
ENSPREG00000011044	chd3	95	84.692	ENSLBEG00000028485	chd3	91	91.632	Labrus_bergylta
ENSPREG00000011044	chd3	97	72.323	ENSLACG00000008031	CHD3	97	72.004	Latimeria_chalumnae
ENSPREG00000011044	chd3	97	85.246	ENSLOCG00000013965	chd3	90	84.040	Lepisosteus_oculatus
ENSPREG00000011044	chd3	91	83.916	ENSLAFG00000000572	CHD3	87	88.444	Loxodonta_africana
ENSPREG00000011044	chd3	99	79.301	ENSMFAG00000020113	CHD3	91	84.502	Macaca_fascicularis
ENSPREG00000011044	chd3	99	77.419	ENSMMUG00000022221	CHD3	90	84.502	Macaca_mulatta
ENSPREG00000011044	chd3	99	79.301	ENSMNEG00000001728	CHD3	91	84.502	Macaca_nemestrina
ENSPREG00000011044	chd3	99	79.301	ENSMLEG00000032249	CHD3	89	84.502	Mandrillus_leucophaeus
ENSPREG00000011044	chd3	86	94.319	ENSMAMG00000000564	chd3	94	96.111	Mastacembelus_armatus
ENSPREG00000011044	chd3	99	76.849	ENSMAUG00000013873	Chd3	92	81.119	Mesocricetus_auratus
ENSPREG00000011044	chd3	99	78.687	ENSMICG00000008741	CHD3	89	83.764	Microcebus_murinus
ENSPREG00000011044	chd3	99	77.612	ENSMOCG00000004848	Chd3	97	75.213	Microtus_ochrogaster
ENSPREG00000011044	chd3	96	87.023	ENSMMOG00000012699	chd3	94	96.751	Mola_mola
ENSPREG00000011044	chd3	93	77.258	ENSMODG00000007509	CHD3	98	77.392	Monodelphis_domestica
ENSPREG00000011044	chd3	98	76.612	MGP_CAROLIEiJ_G0016564	Chd3	99	76.013	Mus_caroli
ENSPREG00000011044	chd3	98	77.842	ENSMUSG00000018474	Chd3	99	75.679	Mus_musculus
ENSPREG00000011044	chd3	98	78.735	MGP_PahariEiJ_G0017695	Chd3	99	75.879	Mus_pahari
ENSPREG00000011044	chd3	98	77.907	MGP_SPRETEiJ_G0017400	Chd3	99	75.679	Mus_spretus
ENSPREG00000011044	chd3	88	81.547	ENSMPUG00000008861	CHD3	85	86.207	Mustela_putorius_furo
ENSPREG00000011044	chd3	99	77.835	ENSMLUG00000014643	-	89	84.502	Myotis_lucifugus
ENSPREG00000011044	chd3	99	77.749	ENSNGAG00000000773	Chd3	89	84.133	Nannospalax_galili
ENSPREG00000011044	chd3	87	87.629	ENSNBRG00000000636	chd3	98	87.925	Neolamprologus_brichardi
ENSPREG00000011044	chd3	96	86.122	ENSNLEG00000009770	CHD3	91	86.122	Nomascus_leucogenys
ENSPREG00000011044	chd3	89	79.610	ENSMEUG00000005852	CHD3	83	83.764	Notamacropus_eugenii
ENSPREG00000011044	chd3	95	78.884	ENSOPRG00000011069	CHD3	93	79.068	Ochotona_princeps
ENSPREG00000011044	chd3	99	78.456	ENSODEG00000017785	CHD3	92	80.769	Octodon_degus
ENSPREG00000011044	chd3	97	95.517	ENSONIG00000009292	chd3	95	97.112	Oreochromis_niloticus
ENSPREG00000011044	chd3	99	76.799	ENSOCUG00000029299	CHD3	92	76.781	Oryctolagus_cuniculus
ENSPREG00000011044	chd3	82	84.237	ENSORLG00000007107	chd3	93	83.472	Oryzias_latipes
ENSPREG00000011044	chd3	60	87.996	ENSORLG00020008387	chd3	76	91.628	Oryzias_latipes_hni
ENSPREG00000011044	chd3	86	88.875	ENSOMEG00000013691	chd3	99	89.240	Oryzias_melastigma
ENSPREG00000011044	chd3	99	79.301	ENSOGAG00000003216	CHD3	90	84.133	Otolemur_garnettii
ENSPREG00000011044	chd3	99	78.121	ENSOARG00000017855	CHD3	90	78.476	Ovis_aries
ENSPREG00000011044	chd3	99	75.982	ENSPPAG00000032886	CHD3	91	82.310	Pan_paniscus
ENSPREG00000011044	chd3	99	78.424	ENSPPRG00000000626	CHD3	89	83.764	Panthera_pardus
ENSPREG00000011044	chd3	99	77.942	ENSPTRG00000008714	CHD3	91	84.502	Pan_troglodytes
ENSPREG00000011044	chd3	99	79.301	ENSPANG00000023938	CHD3	91	84.502	Papio_anubis
ENSPREG00000011044	chd3	97	88.411	ENSPKIG00000006305	chd3	95	89.468	Paramormyrops_kingsleyae
ENSPREG00000011044	chd3	58	81.760	ENSPSIG00000010177	CHD3	97	81.751	Pelodiscus_sinensis
ENSPREG00000011044	chd3	99	77.807	ENSPEMG00000014262	Chd3	91	81.119	Peromyscus_maniculatus_bairdii
ENSPREG00000011044	chd3	88	90.955	ENSPCIG00000005442	CHD3	91	88.444	Phascolarctos_cinereus
ENSPREG00000011044	chd3	97	97.586	ENSPFOG00000012464	chd3	86	97.586	Poecilia_formosa
ENSPREG00000011044	chd3	95	88.797	ENSPLAG00000002887	chd3	98	88.797	Poecilia_latipinna
ENSPREG00000011044	chd3	61	92.246	ENSPMEG00000016725	chd3	94	92.246	Poecilia_mexicana
ENSPREG00000011044	chd3	99	75.244	ENSPPYG00000007940	CHD3	90	81.404	Pongo_abelii
ENSPREG00000011044	chd3	95	85.474	ENSPCAG00000004350	CHD3	87	86.797	Procavia_capensis
ENSPREG00000011044	chd3	99	78.071	ENSPCOG00000020952	CHD3	89	84.133	Propithecus_coquereli
ENSPREG00000011044	chd3	82	80.894	ENSPVAG00000016344	CHD3	74	86.364	Pteropus_vampyrus
ENSPREG00000011044	chd3	97	87.540	ENSPNAG00000020393	chd3	99	86.979	Pygocentrus_nattereri
ENSPREG00000011044	chd3	92	80.352	ENSRNOG00000009722	Chd3	92	80.769	Rattus_norvegicus
ENSPREG00000011044	chd3	99	76.524	ENSRBIG00000033562	CHD3	91	84.502	Rhinopithecus_bieti
ENSPREG00000011044	chd3	99	77.532	ENSRROG00000029554	CHD3	91	84.502	Rhinopithecus_roxellana
ENSPREG00000011044	chd3	99	78.006	ENSSBOG00000020719	CHD3	91	84.502	Saimiri_boliviensis_boliviensis
ENSPREG00000011044	chd3	99	75.732	ENSSHAG00000014412	CHD3	97	76.251	Sarcophilus_harrisii
ENSPREG00000011044	chd3	88	85.283	ENSSFOG00015023123	chd3	98	79.025	Scleropages_formosus
ENSPREG00000011044	chd3	91	94.863	ENSSMAG00000006451	chd3	92	97.810	Scophthalmus_maximus
ENSPREG00000011044	chd3	58	89.116	ENSSDUG00000005792	chd3	76	92.512	Seriola_dumerili
ENSPREG00000011044	chd3	97	94.845	ENSSPAG00000013694	chd3	99	91.508	Stegastes_partitus
ENSPREG00000011044	chd3	99	78.655	ENSSSCG00000021363	CHD3	92	81.317	Sus_scrofa
ENSPREG00000011044	chd3	81	88.050	ENSTRUG00000014990	chd3	89	88.799	Takifugu_rubripes
ENSPREG00000011044	chd3	96	86.300	ENSTNIG00000012998	chd3	97	84.923	Tetraodon_nigroviridis
ENSPREG00000011044	chd3	65	89.604	ENSTBEG00000011454	-	59	89.604	Tupaia_belangeri
ENSPREG00000011044	chd3	98	82.921	ENSTTRG00000010295	CHD3	84	84.105	Tursiops_truncatus
ENSPREG00000011044	chd3	93	79.042	ENSUAMG00000005475	CHD3	92	80.769	Ursus_americanus
ENSPREG00000011044	chd3	53	91.304	ENSVPAG00000010794	-	56	96.078	Vicugna_pacos
ENSPREG00000011044	chd3	96	80.014	ENSVVUG00000028011	CHD3	90	84.133	Vulpes_vulpes
ENSPREG00000011044	chd3	97	76.206	ENSXETG00000012991	chd3	84	80.351	Xenopus_tropicalis
ENSPREG00000011044	chd3	64	96.618	ENSXCOG00000000809	chd3	98	96.618	Xiphophorus_couchianus
ENSPREG00000011044	chd3	86	96.752	ENSXMAG00000016035	chd3	99	96.752	Xiphophorus_maculatus