EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011076 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 2541 bases
Position: chrLG11:15433948-15436488
Accession: 103472452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016377	RRM_1	PF00076.22	3e-39	1	2
ENSPREP00000016377	RRM_1	PF00076.22	3e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016555	-	1212	XM_008422099	ENSPREP00000016377	403 (aa)	XP_008420321	-

Gene Model

Click here to download ENSPREG00000011076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011076	sf3b4	53	34.536	ENSPREG00000019232	tia1l	88	36.994
ENSPREG00000011076	sf3b4	70	38.251	ENSPREG00000010911	pabpc1b	60	38.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011076	sf3b4	57	97.807	ENSG00000143368	SF3B4	99	95.767	Homo_sapiens
ENSPREG00000011076	sf3b4	72	95.502	ENSAPOG00000017647	sf3b4	70	95.374	Acanthochromis_polyacanthus
ENSPREG00000011076	sf3b4	57	97.807	ENSAMEG00000010073	SF3B4	64	90.476	Ailuropoda_melanoleuca
ENSPREG00000011076	sf3b4	72	95.156	ENSAOCG00000019801	sf3b4	70	95.018	Amphiprion_ocellaris
ENSPREG00000011076	sf3b4	72	95.156	ENSAPEG00000010365	sf3b4	70	95.018	Amphiprion_percula
ENSPREG00000011076	sf3b4	60	99.177	ENSATEG00000012844	sf3b4	66	97.753	Anabas_testudineus
ENSPREG00000011076	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	65	91.852	Anolis_carolinensis
ENSPREG00000011076	sf3b4	57	97.807	ENSANAG00000031025	SF3B4	56	95.359	Aotus_nancymaae
ENSPREG00000011076	sf3b4	70	92.527	ENSACLG00000014260	sf3b4	70	91.103	Astatotilapia_calliptera
ENSPREG00000011076	sf3b4	60	96.708	ENSAMXG00000008282	sf3b4	66	95.437	Astyanax_mexicanus
ENSPREG00000011076	sf3b4	57	97.807	ENSBTAG00000012495	SF3B4	64	90.476	Bos_taurus
ENSPREG00000011076	sf3b4	50	96.040	ENSBTAG00000012793	-	60	89.024	Bos_taurus
ENSPREG00000011076	sf3b4	57	97.807	ENSCAFG00000011617	SF3B4	64	90.476	Canis_familiaris
ENSPREG00000011076	sf3b4	57	97.807	ENSCAFG00020019775	SF3B4	64	90.476	Canis_lupus_dingo
ENSPREG00000011076	sf3b4	76	59.295	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSPREG00000011076	sf3b4	57	97.807	ENSCHIG00000025663	-	64	90.476	Capra_hircus
ENSPREG00000011076	sf3b4	57	97.807	ENSTSYG00000009295	SF3B4	56	95.359	Carlito_syrichta
ENSPREG00000011076	sf3b4	58	94.086	ENSCAPG00000006451	SF3B4	51	94.475	Cavia_aperea
ENSPREG00000011076	sf3b4	57	97.807	ENSCPOG00000008267	SF3B4	64	90.476	Cavia_porcellus
ENSPREG00000011076	sf3b4	77	67.178	ENSCCAG00000019823	-	59	80.000	Cebus_capucinus
ENSPREG00000011076	sf3b4	53	99.057	ENSCCAG00000021751	-	53	94.515	Cebus_capucinus
ENSPREG00000011076	sf3b4	57	97.807	ENSCATG00000033114	SF3B4	56	95.359	Cercocebus_atys
ENSPREG00000011076	sf3b4	57	97.807	ENSCLAG00000015851	SF3B4	64	90.476	Chinchilla_lanigera
ENSPREG00000011076	sf3b4	57	97.807	ENSCSAG00000018129	SF3B4	56	95.359	Chlorocebus_sabaeus
ENSPREG00000011076	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	65	91.852	Chrysemys_picta_bellii
ENSPREG00000011076	sf3b4	56	87.665	ENSCING00000002337	-	73	78.545	Ciona_intestinalis
ENSPREG00000011076	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSPREG00000011076	sf3b4	57	97.807	ENSCANG00000035579	SF3B4	56	95.359	Colobus_angolensis_palliatus
ENSPREG00000011076	sf3b4	57	97.807	ENSCGRG00001003590	Sf3b4	64	90.476	Cricetulus_griseus_chok1gshd
ENSPREG00000011076	sf3b4	57	97.807	ENSCGRG00000016914	Sf3b4	64	90.476	Cricetulus_griseus_crigri
ENSPREG00000011076	sf3b4	66	93.680	ENSCSEG00000015258	sf3b4	57	95.203	Cynoglossus_semilaevis
ENSPREG00000011076	sf3b4	68	95.985	ENSCVAG00000005536	sf3b4	70	94.526	Cyprinodon_variegatus
ENSPREG00000011076	sf3b4	60	97.531	ENSDARG00000018574	sf3b4	67	95.880	Danio_rerio
ENSPREG00000011076	sf3b4	55	92.273	ENSDNOG00000048908	-	62	87.259	Dasypus_novemcinctus
ENSPREG00000011076	sf3b4	57	80.263	ENSDNOG00000037231	-	63	77.043	Dasypus_novemcinctus
ENSPREG00000011076	sf3b4	57	97.807	ENSDORG00000016366	Sf3b4	64	90.476	Dipodomys_ordii
ENSPREG00000011076	sf3b4	57	87.719	ENSETEG00000008963	SF3B4	64	82.721	Echinops_telfairi
ENSPREG00000011076	sf3b4	57	97.807	ENSEASG00005001477	SF3B4	64	90.476	Equus_asinus_asinus
ENSPREG00000011076	sf3b4	57	97.807	ENSECAG00000024737	SF3B4	64	90.476	Equus_caballus
ENSPREG00000011076	sf3b4	60	97.531	ENSELUG00000012876	sf3b4	66	95.506	Esox_lucius
ENSPREG00000011076	sf3b4	57	97.807	ENSFCAG00000010106	SF3B4	64	90.476	Felis_catus
ENSPREG00000011076	sf3b4	57	97.807	ENSFDAG00000009286	SF3B4	64	90.476	Fukomys_damarensis
ENSPREG00000011076	sf3b4	89	93.352	ENSFHEG00000008211	sf3b4	51	93.352	Fundulus_heteroclitus
ENSPREG00000011076	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	65	92.593	Gallus_gallus
ENSPREG00000011076	sf3b4	88	94.350	ENSGAFG00000010181	sf3b4	87	94.350	Gambusia_affinis
ENSPREG00000011076	sf3b4	56	100.000	ENSGACG00000003819	sf3b4	66	95.038	Gasterosteus_aculeatus
ENSPREG00000011076	sf3b4	53	100.000	ENSGAGG00000025055	SF3B4	57	91.852	Gopherus_agassizii
ENSPREG00000011076	sf3b4	82	65.882	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSPREG00000011076	sf3b4	57	97.807	ENSGGOG00000004761	SF3B4	56	95.359	Gorilla_gorilla
ENSPREG00000011076	sf3b4	70	92.527	ENSHBUG00000002028	sf3b4	70	91.103	Haplochromis_burtoni
ENSPREG00000011076	sf3b4	57	97.807	ENSHGLG00000012360	SF3B4	64	90.476	Heterocephalus_glaber_female
ENSPREG00000011076	sf3b4	57	97.807	ENSHGLG00100008533	SF3B4	64	91.418	Heterocephalus_glaber_male
ENSPREG00000011076	sf3b4	56	97.357	ENSHCOG00000003014	sf3b4	66	90.494	Hippocampus_comes
ENSPREG00000011076	sf3b4	60	97.942	ENSIPUG00000012242	Sf3b4	67	95.506	Ictalurus_punctatus
ENSPREG00000011076	sf3b4	61	72.764	ENSSTOG00000029627	-	60	69.962	Ictidomys_tridecemlineatus
ENSPREG00000011076	sf3b4	57	97.807	ENSSTOG00000000684	-	64	90.476	Ictidomys_tridecemlineatus
ENSPREG00000011076	sf3b4	56	70.588	ENSJJAG00000022500	Sf3b4	73	66.667	Jaculus_jaculus
ENSPREG00000011076	sf3b4	67	97.026	ENSKMAG00000008154	sf3b4	70	96.350	Kryptolebias_marmoratus
ENSPREG00000011076	sf3b4	58	98.283	ENSLBEG00000026818	sf3b4	67	94.757	Labrus_bergylta
ENSPREG00000011076	sf3b4	60	94.167	ENSLACG00000004436	SF3B4	73	91.321	Latimeria_chalumnae
ENSPREG00000011076	sf3b4	60	97.083	ENSLOCG00000009048	sf3b4	57	97.083	Lepisosteus_oculatus
ENSPREG00000011076	sf3b4	57	97.807	ENSLAFG00000008531	SF3B4	64	90.476	Loxodonta_africana
ENSPREG00000011076	sf3b4	57	97.807	ENSMFAG00000042395	SF3B4	56	95.359	Macaca_fascicularis
ENSPREG00000011076	sf3b4	57	97.807	ENSMMUG00000007256	SF3B4	56	95.359	Macaca_mulatta
ENSPREG00000011076	sf3b4	57	97.807	ENSMNEG00000031839	SF3B4	56	95.359	Macaca_nemestrina
ENSPREG00000011076	sf3b4	57	97.807	ENSMLEG00000038667	SF3B4	56	95.359	Mandrillus_leucophaeus
ENSPREG00000011076	sf3b4	60	97.119	ENSMAMG00000014692	sf3b4	69	93.455	Mastacembelus_armatus
ENSPREG00000011076	sf3b4	70	92.527	ENSMZEG00005026741	sf3b4	70	91.103	Maylandia_zebra
ENSPREG00000011076	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	67	91.367	Meleagris_gallopavo
ENSPREG00000011076	sf3b4	57	97.807	ENSMAUG00000015266	Sf3b4	64	90.476	Mesocricetus_auratus
ENSPREG00000011076	sf3b4	57	97.807	ENSMICG00000044961	SF3B4	64	90.476	Microcebus_murinus
ENSPREG00000011076	sf3b4	51	98.049	ENSMOCG00000014155	-	65	88.593	Microtus_ochrogaster
ENSPREG00000011076	sf3b4	57	97.807	ENSMOCG00000013658	-	64	90.476	Microtus_ochrogaster
ENSPREG00000011076	sf3b4	57	98.696	ENSMMOG00000018032	sf3b4	69	94.139	Mola_mola
ENSPREG00000011076	sf3b4	57	97.807	ENSMODG00000018767	SF3B4	56	95.359	Monodelphis_domestica
ENSPREG00000011076	sf3b4	67	95.149	ENSMALG00000006174	sf3b4	68	94.182	Monopterus_albus
ENSPREG00000011076	sf3b4	57	97.807	MGP_CAROLIEiJ_G0025365	Sf3b4	64	90.110	Mus_caroli
ENSPREG00000011076	sf3b4	57	97.807	ENSMUSG00000068856	Sf3b4	64	90.476	Mus_musculus
ENSPREG00000011076	sf3b4	57	97.807	MGP_PahariEiJ_G0026809	Sf3b4	64	90.476	Mus_pahari
ENSPREG00000011076	sf3b4	57	97.807	MGP_SPRETEiJ_G0026309	Sf3b4	64	90.476	Mus_spretus
ENSPREG00000011076	sf3b4	57	97.807	ENSMPUG00000005563	SF3B4	64	90.476	Mustela_putorius_furo
ENSPREG00000011076	sf3b4	57	97.807	ENSMLUG00000010789	SF3B4	64	90.842	Myotis_lucifugus
ENSPREG00000011076	sf3b4	57	97.807	ENSNGAG00000016337	Sf3b4	64	90.476	Nannospalax_galili
ENSPREG00000011076	sf3b4	70	93.238	ENSNBRG00000013865	sf3b4	70	91.815	Neolamprologus_brichardi
ENSPREG00000011076	sf3b4	87	46.612	ENSNLEG00000009693	-	80	46.612	Nomascus_leucogenys
ENSPREG00000011076	sf3b4	53	90.094	ENSNLEG00000000537	-	60	86.498	Nomascus_leucogenys
ENSPREG00000011076	sf3b4	57	93.421	ENSOPRG00000010808	SF3B4	64	86.813	Ochotona_princeps
ENSPREG00000011076	sf3b4	60	79.253	ENSODEG00000003597	-	68	76.923	Octodon_degus
ENSPREG00000011076	sf3b4	83	57.681	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSPREG00000011076	sf3b4	66	95.489	ENSONIG00000002730	sf3b4	66	95.489	Oreochromis_niloticus
ENSPREG00000011076	sf3b4	65	71.269	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSPREG00000011076	sf3b4	57	97.807	ENSOCUG00000004614	SF3B4	64	90.476	Oryctolagus_cuniculus
ENSPREG00000011076	sf3b4	66	93.309	ENSORLG00000003062	sf3b4	70	90.074	Oryzias_latipes
ENSPREG00000011076	sf3b4	66	93.309	ENSORLG00020000687	sf3b4	68	90.074	Oryzias_latipes_hni
ENSPREG00000011076	sf3b4	66	93.309	ENSORLG00015010989	sf3b4	68	90.074	Oryzias_latipes_hsok
ENSPREG00000011076	sf3b4	58	97.414	ENSOMEG00000013694	sf3b4	68	94.815	Oryzias_melastigma
ENSPREG00000011076	sf3b4	57	97.807	ENSOGAG00000006265	SF3B4	64	90.476	Otolemur_garnettii
ENSPREG00000011076	sf3b4	71	72.054	ENSOARG00000007368	-	55	80.973	Ovis_aries
ENSPREG00000011076	sf3b4	57	97.807	ENSOARG00000020718	-	64	90.476	Ovis_aries
ENSPREG00000011076	sf3b4	57	97.807	ENSPPAG00000040904	SF3B4	56	95.359	Pan_paniscus
ENSPREG00000011076	sf3b4	80	68.955	ENSPPAG00000030024	-	58	85.232	Pan_paniscus
ENSPREG00000011076	sf3b4	57	97.807	ENSPPRG00000007384	SF3B4	64	90.476	Panthera_pardus
ENSPREG00000011076	sf3b4	57	97.807	ENSPTIG00000014530	SF3B4	64	90.476	Panthera_tigris_altaica
ENSPREG00000011076	sf3b4	57	97.807	ENSPTRG00000001243	SF3B4	56	95.359	Pan_troglodytes
ENSPREG00000011076	sf3b4	80	70.552	ENSPTRG00000049727	-	59	85.654	Pan_troglodytes
ENSPREG00000011076	sf3b4	57	97.807	ENSPANG00000005126	SF3B4	56	95.359	Papio_anubis
ENSPREG00000011076	sf3b4	60	97.119	ENSPKIG00000020669	sf3b4	71	95.131	Paramormyrops_kingsleyae
ENSPREG00000011076	sf3b4	57	97.807	ENSPEMG00000017568	Sf3b4	64	90.476	Peromyscus_maniculatus_bairdii
ENSPREG00000011076	sf3b4	53	95.305	ENSPMAG00000007842	-	55	90.295	Petromyzon_marinus
ENSPREG00000011076	sf3b4	57	97.807	ENSPCIG00000008765	SF3B4	56	95.359	Phascolarctos_cinereus
ENSPREG00000011076	sf3b4	88	95.480	ENSPFOG00000005754	sf3b4	87	95.480	Poecilia_formosa
ENSPREG00000011076	sf3b4	94	93.684	ENSPLAG00000001401	sf3b4	100	93.684	Poecilia_latipinna
ENSPREG00000011076	sf3b4	88	94.915	ENSPMEG00000014452	sf3b4	50	94.915	Poecilia_mexicana
ENSPREG00000011076	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSPREG00000011076	sf3b4	57	97.807	ENSPCOG00000015399	SF3B4	64	90.476	Propithecus_coquereli
ENSPREG00000011076	sf3b4	57	97.807	ENSPVAG00000014171	SF3B4	64	90.476	Pteropus_vampyrus
ENSPREG00000011076	sf3b4	70	92.527	ENSPNYG00000012700	sf3b4	70	91.103	Pundamilia_nyererei
ENSPREG00000011076	sf3b4	60	96.708	ENSPNAG00000000686	sf3b4	68	94.757	Pygocentrus_nattereri
ENSPREG00000011076	sf3b4	57	97.807	ENSRNOG00000021181	Sf3b4	64	90.476	Rattus_norvegicus
ENSPREG00000011076	sf3b4	57	97.807	ENSRBIG00000043392	SF3B4	56	95.359	Rhinopithecus_bieti
ENSPREG00000011076	sf3b4	81	58.601	ENSRROG00000028213	-	58	72.489	Rhinopithecus_roxellana
ENSPREG00000011076	sf3b4	57	97.807	ENSRROG00000029366	SF3B4	56	95.359	Rhinopithecus_roxellana
ENSPREG00000011076	sf3b4	57	97.368	ENSSBOG00000012310	-	56	94.937	Saimiri_boliviensis_boliviensis
ENSPREG00000011076	sf3b4	79	61.012	ENSSBOG00000025174	-	51	73.840	Saimiri_boliviensis_boliviensis
ENSPREG00000011076	sf3b4	57	92.982	ENSSHAG00000004043	SF3B4	55	90.717	Sarcophilus_harrisii
ENSPREG00000011076	sf3b4	60	97.119	ENSSFOG00015008864	sf3b4	66	95.131	Scleropages_formosus
ENSPREG00000011076	sf3b4	65	96.947	ENSSMAG00000006837	sf3b4	67	96.642	Scophthalmus_maximus
ENSPREG00000011076	sf3b4	66	96.617	ENSSDUG00000012064	sf3b4	66	96.629	Seriola_dumerili
ENSPREG00000011076	sf3b4	66	96.617	ENSSLDG00000014226	sf3b4	66	96.629	Seriola_lalandi_dorsalis
ENSPREG00000011076	sf3b4	60	97.531	ENSSPAG00000019219	sf3b4	66	96.255	Stegastes_partitus
ENSPREG00000011076	sf3b4	57	97.807	ENSSSCG00000006665	-	64	90.476	Sus_scrofa
ENSPREG00000011076	sf3b4	60	95.021	ENSTGUG00000004470	SF3B4	93	96.186	Taeniopygia_guttata
ENSPREG00000011076	sf3b4	82	84.894	ENSTRUG00000004516	sf3b4	67	94.757	Takifugu_rubripes
ENSPREG00000011076	sf3b4	66	92.857	ENSTNIG00000009156	sf3b4	68	90.037	Tetraodon_nigroviridis
ENSPREG00000011076	sf3b4	57	97.807	ENSTTRG00000005217	SF3B4	64	90.476	Tursiops_truncatus
ENSPREG00000011076	sf3b4	57	97.807	ENSUAMG00000022468	SF3B4	64	90.476	Ursus_americanus
ENSPREG00000011076	sf3b4	57	97.807	ENSUMAG00000003802	SF3B4	64	90.476	Ursus_maritimus
ENSPREG00000011076	sf3b4	54	97.685	ENSVPAG00000008152	SF3B4	63	90.038	Vicugna_pacos
ENSPREG00000011076	sf3b4	69	80.505	ENSVVUG00000022697	-	56	88.390	Vulpes_vulpes
ENSPREG00000011076	sf3b4	57	97.807	ENSVVUG00000007732	-	70	91.176	Vulpes_vulpes
ENSPREG00000011076	sf3b4	50	100.000	ENSXETG00000011038	sf3b4	81	77.564	Xenopus_tropicalis
ENSPREG00000011076	sf3b4	88	94.633	ENSXCOG00000019895	sf3b4	87	94.633	Xiphophorus_couchianus
ENSPREG00000011076	sf3b4	88	94.915	ENSXMAG00000003772	sf3b4	87	94.915	Xiphophorus_maculatus