EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011270 (Gene tree)
Gene ID: 103457668
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 26489 bases
Position: chrLG21:13701628-13728116
Accession: 103457668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016662	GTP_EFTU	PF00009.27	2.5e-47	1	1
ENSPREP00000016672	GTP_EFTU	PF00009.27	2.7e-47	1	1
ENSPREP00000016662	GTP_EFTU_D2	PF03144.25	2.5e-09	1	1
ENSPREP00000016672	GTP_EFTU_D2	PF03144.25	2.6e-09	1	1
ENSPREP00000016662	GTP_EFTU_D3	PF03143.17	5.2e-28	1	1
ENSPREP00000016672	GTP_EFTU_D3	PF03143.17	5.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016842	-	4584	XM_017302295	ENSPREP00000016662	702 (aa)	XP_017157784	UPI0004A222E0
ENSPRET00000016873	-	4915	XM_008397966	ENSPREP00000016693	643 (aa)	XP_008396188	UPI0004A428AF
ENSPRET00000016852	-	2166	-	ENSPREP00000016672	721 (aa)	-	-

Gene Model

Click here to download ENSPREG00000011270's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011270	hbs1l	60	41.412	ENSPREG00000016668	-	86	41.412
ENSPREG00000011270	hbs1l	60	41.364	ENSPREG00000004165	EEF1A1	94	41.364
ENSPREG00000011270	hbs1l	60	41.364	ENSPREG00000001416	eef1a1b	94	41.364
ENSPREG00000011270	hbs1l	60	40.618	ENSPREG00000008023	gspt1l	67	40.618
ENSPREG00000011270	hbs1l	60	42.166	ENSPREG00000008243	-	94	42.166
ENSPREG00000011270	hbs1l	61	38.202	ENSPREG00000006280	si:dkey-37o8.1	94	46.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011270	hbs1l	100	71.773	ENSG00000112339	HBS1L	95	89.130	Homo_sapiens
ENSPREG00000011270	hbs1l	82	93.029	ENSAPOG00000013169	hbs1l	91	93.029	Acanthochromis_polyacanthus
ENSPREG00000011270	hbs1l	99	71.693	ENSAMEG00000009749	HBS1L	99	71.388	Ailuropoda_melanoleuca
ENSPREG00000011270	hbs1l	76	88.641	ENSACIG00000017087	hbs1l	91	88.641	Amphilophus_citrinellus
ENSPREG00000011270	hbs1l	100	88.762	ENSAPEG00000008320	hbs1l	100	88.762	Amphiprion_percula
ENSPREG00000011270	hbs1l	100	87.358	ENSATEG00000004459	hbs1l	100	87.216	Anabas_testudineus
ENSPREG00000011270	hbs1l	98	69.353	ENSAPLG00000007791	HBS1L	100	68.777	Anas_platyrhynchos
ENSPREG00000011270	hbs1l	100	70.680	ENSACAG00000010120	HBS1L	100	70.680	Anolis_carolinensis
ENSPREG00000011270	hbs1l	100	71.671	ENSANAG00000038076	HBS1L	95	89.130	Aotus_nancymaae
ENSPREG00000011270	hbs1l	100	87.340	ENSACLG00000010469	hbs1l	100	87.340	Astatotilapia_calliptera
ENSPREG00000011270	hbs1l	100	77.574	ENSAMXG00000004260	hbs1l	97	83.769	Astyanax_mexicanus
ENSPREG00000011270	hbs1l	100	71.871	ENSBTAG00000020174	HBS1L	100	71.308	Bos_taurus
ENSPREG00000011270	hbs1l	61	48.730	WBGene00010622	K07A12.4	72	48.730	Caenorhabditis_elegans
ENSPREG00000011270	hbs1l	100	72.096	ENSCJAG00000007678	HBS1L	94	89.130	Callithrix_jacchus
ENSPREG00000011270	hbs1l	100	70.922	ENSCAFG00000000226	HBS1L	100	70.763	Canis_familiaris
ENSPREG00000011270	hbs1l	100	70.922	ENSCAFG00020021904	HBS1L	100	70.763	Canis_lupus_dingo
ENSPREG00000011270	hbs1l	100	71.813	ENSCHIG00000010299	HBS1L	100	71.246	Capra_hircus
ENSPREG00000011270	hbs1l	100	69.830	ENSTSYG00000007089	HBS1L	93	84.783	Carlito_syrichta
ENSPREG00000011270	hbs1l	99	62.020	ENSCPOG00000007015	HBS1L	99	62.393	Cavia_porcellus
ENSPREG00000011270	hbs1l	100	70.255	ENSCCAG00000033863	HBS1L	100	72.285	Cebus_capucinus
ENSPREG00000011270	hbs1l	100	71.489	ENSCATG00000043042	HBS1L	93	89.130	Cercocebus_atys
ENSPREG00000011270	hbs1l	100	70.863	ENSCLAG00000004937	HBS1L	100	70.721	Chinchilla_lanigera
ENSPREG00000011270	hbs1l	100	70.963	ENSCSAG00000016791	HBS1L	100	70.963	Chlorocebus_sabaeus
ENSPREG00000011270	hbs1l	97	56.122	ENSCHOG00000001852	HBS1L	99	55.267	Choloepus_hoffmanni
ENSPREG00000011270	hbs1l	100	69.972	ENSCPBG00000017635	HBS1L	100	69.972	Chrysemys_picta_bellii
ENSPREG00000011270	hbs1l	99	48.285	ENSCING00000005592	-	99	48.285	Ciona_intestinalis
ENSPREG00000011270	hbs1l	97	60.000	ENSCSAVG00000002297	-	99	60.000	Ciona_savignyi
ENSPREG00000011270	hbs1l	100	70.922	ENSCANG00000031208	HBS1L	93	89.130	Colobus_angolensis_palliatus
ENSPREG00000011270	hbs1l	100	71.994	ENSCGRG00001024531	Hbs1l	100	71.429	Cricetulus_griseus_chok1gshd
ENSPREG00000011270	hbs1l	100	71.994	ENSCGRG00000017361	Hbs1l	100	71.429	Cricetulus_griseus_crigri
ENSPREG00000011270	hbs1l	99	85.369	ENSCSEG00000002794	hbs1l	94	84.943	Cynoglossus_semilaevis
ENSPREG00000011270	hbs1l	100	91.311	ENSCVAG00000001462	hbs1l	100	91.311	Cyprinodon_variegatus
ENSPREG00000011270	hbs1l	100	78.298	ENSDARG00000036778	hbs1l	100	78.298	Danio_rerio
ENSPREG00000011270	hbs1l	100	70.881	ENSDORG00000005958	Hbs1l	100	70.881	Dipodomys_ordii
ENSPREG00000011270	hbs1l	99	46.027	FBgn0042712	HBS1	100	46.419	Drosophila_melanogaster
ENSPREG00000011270	hbs1l	100	66.997	ENSETEG00000000913	HBS1L	100	66.289	Echinops_telfairi
ENSPREG00000011270	hbs1l	87	67.883	ENSEBUG00000010759	hbs1l	100	62.520	Eptatretus_burgeri
ENSPREG00000011270	hbs1l	100	71.368	ENSEASG00005011148	HBS1L	100	70.763	Equus_asinus_asinus
ENSPREG00000011270	hbs1l	100	71.086	ENSECAG00000004470	HBS1L	100	70.480	Equus_caballus
ENSPREG00000011270	hbs1l	100	66.949	ENSEEUG00000013582	HBS1L	100	66.949	Erinaceus_europaeus
ENSPREG00000011270	hbs1l	82	74.798	ENSELUG00000006444	hbs1l	96	76.190	Esox_lucius
ENSPREG00000011270	hbs1l	100	71.268	ENSFCAG00000001810	HBS1L	95	89.130	Felis_catus
ENSPREG00000011270	hbs1l	87	70.942	ENSFALG00000011898	HBS1L	100	70.942	Ficedula_albicollis
ENSPREG00000011270	hbs1l	100	70.538	ENSFDAG00000011841	HBS1L	100	70.397	Fukomys_damarensis
ENSPREG00000011270	hbs1l	100	92.450	ENSFHEG00000006942	hbs1l	100	92.450	Fundulus_heteroclitus
ENSPREG00000011270	hbs1l	99	78.663	ENSGMOG00000011843	hbs1l	100	78.663	Gadus_morhua
ENSPREG00000011270	hbs1l	100	70.721	ENSGALG00000013962	HBS1L	100	69.731	Gallus_gallus
ENSPREG00000011270	hbs1l	100	97.151	ENSGAFG00000004157	hbs1l	100	97.151	Gambusia_affinis
ENSPREG00000011270	hbs1l	99	83.357	ENSGACG00000011035	hbs1l	100	83.531	Gasterosteus_aculeatus
ENSPREG00000011270	hbs1l	100	69.307	ENSGAGG00000002033	HBS1L	100	68.688	Gopherus_agassizii
ENSPREG00000011270	hbs1l	77	73.665	ENSGGOG00000034956	-	93	82.258	Gorilla_gorilla
ENSPREG00000011270	hbs1l	100	87.482	ENSHBUG00000013424	hbs1l	100	87.482	Haplochromis_burtoni
ENSPREG00000011270	hbs1l	100	70.822	ENSHGLG00000000516	HBS1L	100	69.371	Heterocephalus_glaber_female
ENSPREG00000011270	hbs1l	100	70.822	ENSHGLG00100003550	HBS1L	100	69.371	Heterocephalus_glaber_male
ENSPREG00000011270	hbs1l	100	82.504	ENSHCOG00000007581	hbs1l	94	81.519	Hippocampus_comes
ENSPREG00000011270	hbs1l	100	77.131	ENSIPUG00000010748	hbs1l	100	76.562	Ictalurus_punctatus
ENSPREG00000011270	hbs1l	100	71.711	ENSSTOG00000007551	HBS1L	100	71.246	Ictidomys_tridecemlineatus
ENSPREG00000011270	hbs1l	99	68.272	ENSJJAG00000017024	-	97	68.608	Jaculus_jaculus
ENSPREG00000011270	hbs1l	100	55.524	ENSJJAG00000012660	-	100	54.190	Jaculus_jaculus
ENSPREG00000011270	hbs1l	100	89.174	ENSKMAG00000012130	hbs1l	100	89.174	Kryptolebias_marmoratus
ENSPREG00000011270	hbs1l	100	88.177	ENSLBEG00000002784	hbs1l	100	90.299	Labrus_bergylta
ENSPREG00000011270	hbs1l	69	76.531	ENSLACG00000004528	HBS1L	99	76.687	Latimeria_chalumnae
ENSPREG00000011270	hbs1l	100	73.803	ENSLOCG00000016221	hbs1l	100	73.803	Lepisosteus_oculatus
ENSPREG00000011270	hbs1l	100	69.068	ENSLAFG00000007835	HBS1L	100	68.741	Loxodonta_africana
ENSPREG00000011270	hbs1l	100	71.348	ENSMFAG00000003766	HBS1L	95	89.130	Macaca_fascicularis
ENSPREG00000011270	hbs1l	89	77.532	ENSMMUG00000004802	HBS1L	95	89.130	Macaca_mulatta
ENSPREG00000011270	hbs1l	100	71.348	ENSMNEG00000043942	HBS1L	95	89.130	Macaca_nemestrina
ENSPREG00000011270	hbs1l	99	71.083	ENSMLEG00000043218	HBS1L	93	89.130	Mandrillus_leucophaeus
ENSPREG00000011270	hbs1l	100	86.080	ENSMAMG00000016498	hbs1l	98	89.139	Mastacembelus_armatus
ENSPREG00000011270	hbs1l	100	87.340	ENSMZEG00005015575	hbs1l	100	87.340	Maylandia_zebra
ENSPREG00000011270	hbs1l	77	89.033	ENSMZEG00005024018	-	90	89.033	Maylandia_zebra
ENSPREG00000011270	hbs1l	99	68.902	ENSMGAG00000013065	HBS1L	99	68.616	Meleagris_gallopavo
ENSPREG00000011270	hbs1l	100	72.199	ENSMAUG00000001077	Hbs1l	100	71.631	Mesocricetus_auratus
ENSPREG00000011270	hbs1l	100	60.876	ENSMICG00000030043	-	96	80.645	Microcebus_murinus
ENSPREG00000011270	hbs1l	99	66.619	ENSMICG00000001533	-	93	74.731	Microcebus_murinus
ENSPREG00000011270	hbs1l	100	71.146	ENSMOCG00000023038	Hbs1l	100	70.580	Microtus_ochrogaster
ENSPREG00000011270	hbs1l	97	86.657	ENSMMOG00000015507	hbs1l	100	86.657	Mola_mola
ENSPREG00000011270	hbs1l	100	69.547	ENSMODG00000017499	HBS1L	100	69.350	Monodelphis_domestica
ENSPREG00000011270	hbs1l	100	88.193	ENSMALG00000010768	hbs1l	99	90.485	Monopterus_albus
ENSPREG00000011270	hbs1l	100	71.690	MGP_CAROLIEiJ_G0015162	Hbs1l	100	71.549	Mus_caroli
ENSPREG00000011270	hbs1l	100	71.549	ENSMUSG00000019977	Hbs1l	100	93.548	Mus_musculus
ENSPREG00000011270	hbs1l	100	71.831	MGP_PahariEiJ_G0023782	Hbs1l	100	71.831	Mus_pahari
ENSPREG00000011270	hbs1l	100	71.690	MGP_SPRETEiJ_G0015970	Hbs1l	100	71.690	Mus_spretus
ENSPREG00000011270	hbs1l	100	71.631	ENSMPUG00000014810	HBS1L	100	71.530	Mustela_putorius_furo
ENSPREG00000011270	hbs1l	100	71.246	ENSMLUG00000010618	HBS1L	100	70.963	Myotis_lucifugus
ENSPREG00000011270	hbs1l	100	70.822	ENSNGAG00000015184	Hbs1l	100	70.822	Nannospalax_galili
ENSPREG00000011270	hbs1l	100	87.055	ENSNBRG00000020095	hbs1l	100	88.889	Neolamprologus_brichardi
ENSPREG00000011270	hbs1l	100	70.922	ENSNLEG00000014721	HBS1L	94	89.130	Nomascus_leucogenys
ENSPREG00000011270	hbs1l	83	81.218	ENSMEUG00000003907	HBS1L	81	81.218	Notamacropus_eugenii
ENSPREG00000011270	hbs1l	75	80.165	ENSOPRG00000013595	HBS1L	71	82.609	Ochotona_princeps
ENSPREG00000011270	hbs1l	99	70.881	ENSODEG00000008959	HBS1L	100	70.520	Octodon_degus
ENSPREG00000011270	hbs1l	100	87.198	ENSONIG00000000460	hbs1l	100	86.704	Oreochromis_niloticus
ENSPREG00000011270	hbs1l	99	69.645	ENSOANG00000002684	-	99	69.547	Ornithorhynchus_anatinus
ENSPREG00000011270	hbs1l	100	67.898	ENSOCUG00000011619	HBS1L	99	69.404	Oryctolagus_cuniculus
ENSPREG00000011270	hbs1l	100	83.903	ENSORLG00000016559	hbs1l	100	83.903	Oryzias_latipes
ENSPREG00000011270	hbs1l	100	83.761	ENSORLG00020003827	hbs1l	100	83.761	Oryzias_latipes_hni
ENSPREG00000011270	hbs1l	100	83.761	ENSORLG00015023105	hbs1l	100	83.761	Oryzias_latipes_hsok
ENSPREG00000011270	hbs1l	100	84.615	ENSOMEG00000016715	hbs1l	100	84.615	Oryzias_melastigma
ENSPREG00000011270	hbs1l	100	71.429	ENSOGAG00000012604	HBS1L	100	71.429	Otolemur_garnettii
ENSPREG00000011270	hbs1l	99	72.017	ENSOARG00000014798	-	99	71.449	Ovis_aries
ENSPREG00000011270	hbs1l	100	71.671	ENSOARG00000005671	-	100	71.105	Ovis_aries
ENSPREG00000011270	hbs1l	100	71.915	ENSPPAG00000029900	HBS1L	93	89.130	Pan_paniscus
ENSPREG00000011270	hbs1l	100	71.631	ENSPPRG00000005285	HBS1L	95	89.130	Panthera_pardus
ENSPREG00000011270	hbs1l	100	71.631	ENSPTIG00000015803	HBS1L	95	89.130	Panthera_tigris_altaica
ENSPREG00000011270	hbs1l	100	71.915	ENSPTRG00000018630	HBS1L	93	89.130	Pan_troglodytes
ENSPREG00000011270	hbs1l	100	71.064	ENSPANG00000007075	HBS1L	93	89.130	Papio_anubis
ENSPREG00000011270	hbs1l	95	78.788	ENSPKIG00000023171	hbs1l	97	76.782	Paramormyrops_kingsleyae
ENSPREG00000011270	hbs1l	86	67.647	ENSPSIG00000016467	HBS1L	97	67.647	Pelodiscus_sinensis
ENSPREG00000011270	hbs1l	99	81.831	ENSPMGG00000018051	hbs1l	96	90.957	Periophthalmus_magnuspinnatus
ENSPREG00000011270	hbs1l	100	71.893	ENSPEMG00000014369	Hbs1l	100	71.328	Peromyscus_maniculatus_bairdii
ENSPREG00000011270	hbs1l	100	63.083	ENSPMAG00000002516	hbs1l	100	62.659	Petromyzon_marinus
ENSPREG00000011270	hbs1l	100	97.017	ENSPFOG00000021764	hbs1l	100	97.017	Poecilia_formosa
ENSPREG00000011270	hbs1l	100	97.436	ENSPLAG00000006193	hbs1l	100	97.436	Poecilia_latipinna
ENSPREG00000011270	hbs1l	100	97.721	ENSPMEG00000000925	hbs1l	100	97.721	Poecilia_mexicana
ENSPREG00000011270	hbs1l	100	71.206	ENSPPYG00000017027	HBS1L	100	71.206	Pongo_abelii
ENSPREG00000011270	hbs1l	85	77.264	ENSPCAG00000007002	HBS1L	79	77.264	Procavia_capensis
ENSPREG00000011270	hbs1l	84	77.186	ENSPVAG00000015229	HBS1L	85	77.419	Pteropus_vampyrus
ENSPREG00000011270	hbs1l	100	87.198	ENSPNYG00000013360	hbs1l	100	87.198	Pundamilia_nyererei
ENSPREG00000011270	hbs1l	100	78.279	ENSPNAG00000026721	hbs1l	100	78.279	Pygocentrus_nattereri
ENSPREG00000011270	hbs1l	100	71.711	ENSRNOG00000014531	Hbs1l	100	71.711	Rattus_norvegicus
ENSPREG00000011270	hbs1l	100	71.206	ENSRBIG00000004484	HBS1L	92	89.130	Rhinopithecus_bieti
ENSPREG00000011270	hbs1l	100	71.064	ENSRROG00000026176	HBS1L	93	86.957	Rhinopithecus_roxellana
ENSPREG00000011270	hbs1l	61	38.926	YKR084C	-	73	38.926	Saccharomyces_cerevisiae
ENSPREG00000011270	hbs1l	100	63.739	ENSSBOG00000016930	-	98	78.191	Saimiri_boliviensis_boliviensis
ENSPREG00000011270	hbs1l	100	71.530	ENSSBOG00000019696	-	93	89.130	Saimiri_boliviensis_boliviensis
ENSPREG00000011270	hbs1l	100	69.774	ENSSHAG00000013509	HBS1L	100	69.774	Sarcophilus_harrisii
ENSPREG00000011270	hbs1l	99	74.786	ENSSFOG00015017544	hbs1l	96	74.786	Scleropages_formosus
ENSPREG00000011270	hbs1l	100	85.064	ENSSMAG00000010621	hbs1l	100	85.349	Scophthalmus_maximus
ENSPREG00000011270	hbs1l	100	87.909	ENSSDUG00000012974	hbs1l	100	87.909	Seriola_dumerili
ENSPREG00000011270	hbs1l	100	87.198	ENSSLDG00000004960	hbs1l	99	89.739	Seriola_lalandi_dorsalis
ENSPREG00000011270	hbs1l	98	70.102	ENSSARG00000006747	HBS1L	100	70.537	Sorex_araneus
ENSPREG00000011270	hbs1l	99	69.034	ENSSPUG00000012389	HBS1L	99	69.176	Sphenodon_punctatus
ENSPREG00000011270	hbs1l	97	71.261	ENSSSCG00000004169	HBS1L	100	70.427	Sus_scrofa
ENSPREG00000011270	hbs1l	99	69.504	ENSTGUG00000011507	HBS1L	99	69.504	Taeniopygia_guttata
ENSPREG00000011270	hbs1l	99	82.621	ENSTRUG00000016128	hbs1l	99	82.621	Takifugu_rubripes
ENSPREG00000011270	hbs1l	99	83.452	ENSTNIG00000016320	hbs1l	99	83.452	Tetraodon_nigroviridis
ENSPREG00000011270	hbs1l	100	65.483	ENSTBEG00000009950	HBS1L	100	65.483	Tupaia_belangeri
ENSPREG00000011270	hbs1l	99	70.922	ENSTTRG00000003715	HBS1L	99	70.496	Tursiops_truncatus
ENSPREG00000011270	hbs1l	100	72.199	ENSUAMG00000001064	HBS1L	100	71.893	Ursus_americanus
ENSPREG00000011270	hbs1l	100	72.057	ENSUMAG00000024395	HBS1L	100	89.189	Ursus_maritimus
ENSPREG00000011270	hbs1l	88	78.782	ENSVPAG00000006280	HBS1L	86	89.130	Vicugna_pacos
ENSPREG00000011270	hbs1l	100	71.064	ENSVVUG00000000295	HBS1L	100	70.904	Vulpes_vulpes
ENSPREG00000011270	hbs1l	100	69.943	ENSXETG00000003726	hbs1l	100	69.943	Xenopus_tropicalis
ENSPREG00000011270	hbs1l	99	94.294	ENSXCOG00000005323	hbs1l	100	94.294	Xiphophorus_couchianus
ENSPREG00000011270	hbs1l	100	97.721	ENSXMAG00000004359	hbs1l	100	97.721	Xiphophorus_maculatus