EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPREG00000011278 (Gene tree)
Gene ID
103482315
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
19324 bases
Position
chrLG20:4826051-4845374
Accession
103482315
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000016801RRM_1PF00076.222.4e-1711
ENSPREP00000016786RRM_1PF00076.223.7e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000016981-705XM_008438408ENSPREP00000016801234 (aa)XP_008436630UPI0004A4CB1B
ENSPRET00000016966-861XM_008438407ENSPREP00000016786286 (aa)XP_008436629UPI0004A487EF
Gene Model
Click here to download ENSPREG00000011278's gene model file
Pathways
Pathway IDPathway NameSource
pret03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011278's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000011278pabpn18681.159ENSG00000100836PABPN19478.107Homo_sapiens
ENSPREG00000011278pabpn19971.368ENSG00000258643BCL2L2-PABPN17069.658Homo_sapiens
ENSPREG00000011278pabpn110097.552ENSAPOG00000016425pabpn110097.552Acanthochromis_polyacanthus
ENSPREG00000011278pabpn18182.723ENSAMEG00000007048BCL2L2-PABPN110080.628Ailuropoda_melanoleuca
ENSPREG00000011278pabpn110095.486ENSACIG00000021744pabpn110096.629Amphilophus_citrinellus
ENSPREG00000011278pabpn110097.436ENSAOCG00000015805pabpn110097.436Amphiprion_ocellaris
ENSPREG00000011278pabpn110097.436ENSAPEG00000009623pabpn110097.436Amphiprion_percula
ENSPREG00000011278pabpn110097.863ENSATEG00000020531pabpn110097.863Anabas_testudineus
ENSPREG00000011278pabpn18185.864ENSACAG00000006185-8170.954Anolis_carolinensis
ENSPREG00000011278pabpn19967.611ENSANAG00000024513-8472.840Aotus_nancymaae
ENSPREG00000011278pabpn110095.156ENSACLG00000016374pabpn110095.156Astatotilapia_calliptera
ENSPREG00000011278pabpn110096.581ENSAMXG00000000452pabpn110096.581Astyanax_mexicanus
ENSPREG00000011278pabpn18281.865ENSBTAG00000053753-7179.793Bos_taurus
ENSPREG00000011278pabpn18475.758ENSBTAG00000050594-6784.091Bos_taurus
ENSPREG00000011278pabpn18482.412ENSBTAG00000006884PABPN18666.792Bos_taurus
ENSPREG00000011278pabpn16158.904WBGene00003904pabp-27158.904Caenorhabditis_elegans
ENSPREG00000011278pabpn17178.698ENSCJAG00000004407-8476.331Callithrix_jacchus
ENSPREG00000011278pabpn19974.786ENSCJAG00000007960-8473.504Callithrix_jacchus
ENSPREG00000011278pabpn18681.159ENSCAFG00000011482PABPN18668.302Canis_familiaris
ENSPREG00000011278pabpn18681.159ENSCAFG00020007298-8667.925Canis_lupus_dingo
ENSPREG00000011278pabpn18681.159ENSCAFG00020006651-8667.925Canis_lupus_dingo
ENSPREG00000011278pabpn18681.159ENSCHIG00000012184PABPN18667.925Capra_hircus
ENSPREG00000011278pabpn19971.368ENSTSYG00000033996BCL2L2-PABPN19478.107Carlito_syrichta
ENSPREG00000011278pabpn16080.000ENSCAPG00000009461-9977.143Cavia_aperea
ENSPREG00000011278pabpn18680.676ENSCPOG00000025574PABPN16878.571Cavia_porcellus
ENSPREG00000011278pabpn19974.786ENSCCAG00000033954BCL2L2-PABPN18473.504Cebus_capucinus
ENSPREG00000011278pabpn19974.786ENSCATG00000038536BCL2L2-PABPN18473.504Cercocebus_atys
ENSPREG00000011278pabpn16580.263ENSCLAG00000012423PABPN15677.632Chinchilla_lanigera
ENSPREG00000011278pabpn18679.710ENSCSAG00000016036PABPN18265.748Chlorocebus_sabaeus
ENSPREG00000011278pabpn18971.564ENSCHOG00000004798BCL2L2-PABPN19267.873Choloepus_hoffmanni
ENSPREG00000011278pabpn17183.432ENSCPBG00000026060-9480.473Chrysemys_picta_bellii
ENSPREG00000011278pabpn19061.033ENSCING00000012468-7468.263Ciona_intestinalis
ENSPREG00000011278pabpn17662.222ENSCSAVG00000002001-7371.545Ciona_savignyi
ENSPREG00000011278pabpn18569.849ENSCANG00000030980-8762.343Colobus_angolensis_palliatus
ENSPREG00000011278pabpn19971.368ENSCANG00000009750BCL2L2-PABPN19478.107Colobus_angolensis_palliatus
ENSPREG00000011278pabpn18680.676ENSCGRG00001019696Pabpn19477.515Cricetulus_griseus_chok1gshd
ENSPREG00000011278pabpn16290.476ENSCGRG00000011102Pabpn19091.034Cricetulus_griseus_crigri
ENSPREG00000011278pabpn110096.154ENSCSEG00000008774pabpn110096.154Cynoglossus_semilaevis
ENSPREG00000011278pabpn110097.436ENSCVAG00000003152pabpn110097.436Cyprinodon_variegatus
ENSPREG00000011278pabpn18152.910ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSPREG00000011278pabpn110095.299ENSDARG00000045373pabpn110095.434Danio_rerio
ENSPREG00000011278pabpn18681.159ENSDNOG00000023682PABPN18667.925Dasypus_novemcinctus
ENSPREG00000011278pabpn18680.193ENSDORG00000028966-8667.170Dipodomys_ordii
ENSPREG00000011278pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSPREG00000011278pabpn19757.265FBgn0005648Pabp28262.703Drosophila_melanogaster
ENSPREG00000011278pabpn19972.766ENSEBUG00000002322pabpn19972.532Eptatretus_burgeri
ENSPREG00000011278pabpn18681.159ENSEASG00005011716PABPN18667.925Equus_asinus_asinus
ENSPREG00000011278pabpn18580.488ENSECAG00000011652PABPN18567.323Equus_caballus
ENSPREG00000011278pabpn18678.744ENSEEUG00000012973-6975.000Erinaceus_europaeus
ENSPREG00000011278pabpn110092.857ENSELUG00000022654pabpn110090.336Esox_lucius
ENSPREG00000011278pabpn18681.159ENSFCAG00000031922PABPN18667.925Felis_catus
ENSPREG00000011278pabpn17180.473ENSFDAG00000018381BCL2L2-PABPN19478.107Fukomys_damarensis
ENSPREG00000011278pabpn110096.154ENSFHEG00000007215pabpn110096.154Fundulus_heteroclitus
ENSPREG00000011278pabpn110092.308ENSGMOG00000003922pabpn110091.608Gadus_morhua
ENSPREG00000011278pabpn18382.323ENSGALG00000052930-6181.991Gallus_gallus
ENSPREG00000011278pabpn110099.145ENSGAFG00000017099pabpn110099.145Gambusia_affinis
ENSPREG00000011278pabpn110096.154ENSGACG00000002167pabpn110096.154Gasterosteus_aculeatus
ENSPREG00000011278pabpn19465.532ENSGGOG00000025919-6776.923Gorilla_gorilla
ENSPREG00000011278pabpn18968.421ENSGGOG00000039675-9163.071Gorilla_gorilla
ENSPREG00000011278pabpn19974.786ENSGGOG00000022683-8473.504Gorilla_gorilla
ENSPREG00000011278pabpn110097.009ENSHBUG00000019523pabpn110097.009Haplochromis_burtoni
ENSPREG00000011278pabpn18680.676ENSHGLG00000002927-9191.034Heterocephalus_glaber_female
ENSPREG00000011278pabpn17161.538ENSHGLG00000009842-9361.538Heterocephalus_glaber_female
ENSPREG00000011278pabpn18768.900ENSHGLG00000018588-7068.900Heterocephalus_glaber_female
ENSPREG00000011278pabpn17168.391ENSHGLG00100018935-9470.349Heterocephalus_glaber_male
ENSPREG00000011278pabpn18768.900ENSHGLG00100015565-8761.600Heterocephalus_glaber_male
ENSPREG00000011278pabpn19470.270ENSHGLG00100006673-9191.034Heterocephalus_glaber_male
ENSPREG00000011278pabpn110095.726ENSHCOG00000004655pabpn110095.726Hippocampus_comes
ENSPREG00000011278pabpn110095.726ENSIPUG00000008085PABPN110095.726Ictalurus_punctatus
ENSPREG00000011278pabpn110087.607ENSIPUG00000000180-9986.325Ictalurus_punctatus
ENSPREG00000011278pabpn17180.473ENSSTOG00000029847BCL2L2-PABPN19478.107Ictidomys_tridecemlineatus
ENSPREG00000011278pabpn17180.473ENSJJAG00000023507Gm205219478.107Jaculus_jaculus
ENSPREG00000011278pabpn110097.213ENSKMAG00000018748pabpn110097.213Kryptolebias_marmoratus
ENSPREG00000011278pabpn110097.863ENSLBEG00000027266pabpn110097.863Labrus_bergylta
ENSPREG00000011278pabpn17685.000ENSLACG00000000646pabpn19475.676Latimeria_chalumnae
ENSPREG00000011278pabpn110090.972ENSLOCG00000000796pabpn110089.895Lepisosteus_oculatus
ENSPREG00000011278pabpn19066.047ENSLOCG00000004694pabpn1l9962.791Lepisosteus_oculatus
ENSPREG00000011278pabpn16580.921ENSLAFG00000031227-10077.778Loxodonta_africana
ENSPREG00000011278pabpn19971.368ENSMFAG00000032183BCL2L2-PABPN19478.107Macaca_fascicularis
ENSPREG00000011278pabpn16172.727ENSMFAG00000031355-9971.329Macaca_fascicularis
ENSPREG00000011278pabpn19971.368ENSMMUG00000014747BCL2L2-PABPN110077.703Macaca_mulatta
ENSPREG00000011278pabpn18666.990ENSMMUG00000048382-6965.714Macaca_mulatta
ENSPREG00000011278pabpn19974.786ENSMNEG00000045065BCL2L2-PABPN18473.504Macaca_nemestrina
ENSPREG00000011278pabpn17967.553ENSMNEG00000035750-9971.329Macaca_nemestrina
ENSPREG00000011278pabpn17264.881ENSMLEG00000034623-9969.231Mandrillus_leucophaeus
ENSPREG00000011278pabpn19971.368ENSMLEG00000043862BCL2L2-PABPN19478.107Mandrillus_leucophaeus
ENSPREG00000011278pabpn110096.853ENSMAMG00000007979pabpn110096.853Mastacembelus_armatus
ENSPREG00000011278pabpn110097.552ENSMZEG00005011904pabpn110097.552Maylandia_zebra
ENSPREG00000011278pabpn19971.368ENSMAUG00000007383Gm205218768.061Mesocricetus_auratus
ENSPREG00000011278pabpn19975.319ENSMICG00000010002BCL2L2-PABPN18474.262Microcebus_murinus
ENSPREG00000011278pabpn19970.940ENSMOCG00000018557Gm205218891.034Microtus_ochrogaster
ENSPREG00000011278pabpn110097.902ENSMMOG00000005405pabpn110097.902Mola_mola
ENSPREG00000011278pabpn18580.392ENSMODG00000004535-8266.798Monodelphis_domestica
ENSPREG00000011278pabpn110097.203ENSMALG00000019612pabpn110097.203Monopterus_albus
ENSPREG00000011278pabpn18680.193MGP_CAROLIEiJ_G0019277Pabpn18891.034Mus_caroli
ENSPREG00000011278pabpn19970.940MGP_CAROLIEiJ_G0019276Gm205217069.231Mus_caroli
ENSPREG00000011278pabpn19971.368ENSMUSG00000092232Gm205217069.658Mus_musculus
ENSPREG00000011278pabpn18680.676ENSMUSG00000022194Pabpn18891.034Mus_musculus
ENSPREG00000011278pabpn18680.676MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSPREG00000011278pabpn19971.368MGP_PahariEiJ_G0030294Gm205217069.658Mus_pahari
ENSPREG00000011278pabpn19971.368MGP_SPRETEiJ_G0020165Gm205217069.658Mus_spretus
ENSPREG00000011278pabpn18680.676MGP_SPRETEiJ_G0020166Pabpn18891.034Mus_spretus
ENSPREG00000011278pabpn16680.255ENSMPUG00000006775-9277.707Mustela_putorius_furo
ENSPREG00000011278pabpn18479.899ENSMLUG00000028677-8570.464Myotis_lucifugus
ENSPREG00000011278pabpn18181.675ENSMLUG00000003800-10079.581Myotis_lucifugus
ENSPREG00000011278pabpn18878.199ENSMLUG00000012452-6976.303Myotis_lucifugus
ENSPREG00000011278pabpn19971.795ENSNGAG00000019529Gm205217070.085Nannospalax_galili
ENSPREG00000011278pabpn110097.203ENSNBRG00000023955pabpn110097.203Neolamprologus_brichardi
ENSPREG00000011278pabpn18668.116ENSNLEG00000030598-7768.095Nomascus_leucogenys
ENSPREG00000011278pabpn19971.368ENSNLEG00000015007-7479.048Nomascus_leucogenys
ENSPREG00000011278pabpn16458.667ENSNLEG00000035292-9958.000Nomascus_leucogenys
ENSPREG00000011278pabpn18672.683ENSODEG00000003739-8862.891Octodon_degus
ENSPREG00000011278pabpn17671.111ENSODEG00000011555-8968.047Octodon_degus
ENSPREG00000011278pabpn19970.940ENSODEG00000002083BCL2L2-PABPN16878.571Octodon_degus
ENSPREG00000011278pabpn110097.203ENSONIG00000008112pabpn110097.203Oreochromis_niloticus
ENSPREG00000011278pabpn16383.108ENSOANG00000009218-10079.054Ornithorhynchus_anatinus
ENSPREG00000011278pabpn18680.676ENSOCUG00000016174PABPN19567.803Oryctolagus_cuniculus
ENSPREG00000011278pabpn110096.853ENSORLG00000027900pabpn110096.853Oryzias_latipes
ENSPREG00000011278pabpn19996.970ENSORLG00020004681pabpn110094.218Oryzias_latipes_hni
ENSPREG00000011278pabpn110097.436ENSORLG00015000018pabpn110097.436Oryzias_latipes_hsok
ENSPREG00000011278pabpn110097.552ENSOMEG00000016618pabpn110097.552Oryzias_melastigma
ENSPREG00000011278pabpn18681.159ENSOGAG00000008710PABPN18667.925Otolemur_garnettii
ENSPREG00000011278pabpn19971.368ENSOARG00000019336BCL2L2-PABPN16469.658Ovis_aries
ENSPREG00000011278pabpn19971.368ENSPPAG00000028984BCL2L2-PABPN19277.707Pan_paniscus
ENSPREG00000011278pabpn17165.868ENSPPAG00000039421-9364.671Pan_paniscus
ENSPREG00000011278pabpn18681.159ENSPPRG00000010567PABPN18667.925Panthera_pardus
ENSPREG00000011278pabpn17180.473ENSPTIG00000001063BCL2L2-PABPN19478.107Panthera_tigris_altaica
ENSPREG00000011278pabpn19974.786ENSPTRG00000006167BCL2L28473.504Pan_troglodytes
ENSPREG00000011278pabpn110062.128ENSPTRG00000047273-9358.893Pan_troglodytes
ENSPREG00000011278pabpn18468.342ENSPANG00000023326-9971.329Papio_anubis
ENSPREG00000011278pabpn19974.786ENSPANG00000021100BCL2L2-PABPN18473.504Papio_anubis
ENSPREG00000011278pabpn110094.056ENSPKIG00000008144-10093.007Paramormyrops_kingsleyae
ENSPREG00000011278pabpn110091.453ENSPKIG00000018052pabpn110090.598Paramormyrops_kingsleyae
ENSPREG00000011278pabpn16970.807ENSPKIG00000008340pabpn1l7471.812Paramormyrops_kingsleyae
ENSPREG00000011278pabpn15875.000ENSPSIG00000011959-7885.047Pelodiscus_sinensis
ENSPREG00000011278pabpn19597.297ENSPMGG00000022027pabpn110090.909Periophthalmus_magnuspinnatus
ENSPREG00000011278pabpn19971.368ENSPEMG00000008332Gm205218891.034Peromyscus_maniculatus_bairdii
ENSPREG00000011278pabpn17875.269ENSPMAG00000006212pabpn19468.996Petromyzon_marinus
ENSPREG00000011278pabpn18681.159ENSPCIG00000027751-8667.547Phascolarctos_cinereus
ENSPREG00000011278pabpn110099.573ENSPFOG00000010351pabpn19999.573Poecilia_formosa
ENSPREG00000011278pabpn110099.650ENSPLAG00000022696pabpn110099.650Poecilia_latipinna
ENSPREG00000011278pabpn110099.573ENSPMEG00000020856pabpn110099.573Poecilia_mexicana
ENSPREG00000011278pabpn18181.026ENSPPYG00000005663PABPN18967.194Pongo_abelii
ENSPREG00000011278pabpn17967.876ENSPCAG00000005902PABPN18556.746Procavia_capensis
ENSPREG00000011278pabpn19975.319ENSPCOG00000028047BCL2L2-PABPN18474.262Propithecus_coquereli
ENSPREG00000011278pabpn18879.524ENSPVAG00000005270PABPN18666.667Pteropus_vampyrus
ENSPREG00000011278pabpn110097.009ENSPNYG00000013182pabpn110097.009Pundamilia_nyererei
ENSPREG00000011278pabpn110096.154ENSPNAG00000023526pabpn110096.154Pygocentrus_nattereri
ENSPREG00000011278pabpn18861.244ENSPNAG00000021666pabpn1l7970.186Pygocentrus_nattereri
ENSPREG00000011278pabpn18680.676ENSRNOG00000042195Pabpn18568.061Rattus_norvegicus
ENSPREG00000011278pabpn18970.423ENSRBIG00000039547-8264.000Rhinopithecus_bieti
ENSPREG00000011278pabpn19470.721ENSRBIG00000040762BCL2L2-PABPN16868.919Rhinopithecus_bieti
ENSPREG00000011278pabpn18870.000ENSRBIG00000042811-9564.474Rhinopithecus_bieti
ENSPREG00000011278pabpn19465.778ENSRROG00000040409-8264.444Rhinopithecus_roxellana
ENSPREG00000011278pabpn19470.721ENSRROG00000045535BCL2L2-PABPN19478.107Rhinopithecus_roxellana
ENSPREG00000011278pabpn18866.509ENSRROG00000036409-7061.739Rhinopithecus_roxellana
ENSPREG00000011278pabpn19967.611ENSSBOG00000026930BCL2L2-PABPN19277.707Saimiri_boliviensis_boliviensis
ENSPREG00000011278pabpn18182.723ENSSHAG00000014841-8780.105Sarcophilus_harrisii
ENSPREG00000011278pabpn19961.411ENSSHAG00000007707-9956.067Sarcophilus_harrisii
ENSPREG00000011278pabpn110088.511ENSSFOG00015012565pabpn110087.234Scleropages_formosus
ENSPREG00000011278pabpn110095.726ENSSFOG00015014718pabpn110095.726Scleropages_formosus
ENSPREG00000011278pabpn16173.944ENSSFOG00015015833pabpn1l8358.416Scleropages_formosus
ENSPREG00000011278pabpn110097.902ENSSMAG00000020157pabpn110097.902Scophthalmus_maximus
ENSPREG00000011278pabpn110097.552ENSSDUG00000020582pabpn110097.552Seriola_dumerili
ENSPREG00000011278pabpn110097.863ENSSLDG00000007118pabpn110097.863Seriola_lalandi_dorsalis
ENSPREG00000011278pabpn17184.615ENSSPUG00000018308-9481.657Sphenodon_punctatus
ENSPREG00000011278pabpn110096.516ENSSPAG00000021658pabpn110096.516Stegastes_partitus
ENSPREG00000011278pabpn19971.368ENSSSCG00000002023PABPN18667.925Sus_scrofa
ENSPREG00000011278pabpn19261.927ENSSSCG00000034805-7957.547Sus_scrofa
ENSPREG00000011278pabpn110096.154ENSTRUG00000023664pabpn110096.154Takifugu_rubripes
ENSPREG00000011278pabpn19291.705ENSTNIG00000005369pabpn19396.059Tetraodon_nigroviridis
ENSPREG00000011278pabpn18681.159ENSUAMG00000024460PABPN16879.048Ursus_americanus
ENSPREG00000011278pabpn19971.368ENSUMAG00000014288BCL2L2-PABPN17069.658Ursus_maritimus
ENSPREG00000011278pabpn19971.368ENSVVUG00000019912BCL2L2-PABPN17679.487Vulpes_vulpes
ENSPREG00000011278pabpn18482.828ENSXETG00000014597pabpn17380.734Xenopus_tropicalis
ENSPREG00000011278pabpn17587.429ENSXCOG00000005158pabpn19887.429Xiphophorus_couchianus
ENSPREG00000011278pabpn110099.573ENSXMAG00000006196pabpn110099.573Xiphophorus_maculatus

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