EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011359 (Gene tree)
Gene ID: 103477995
Gene Symbol: -
Alias: -
Full Name: chromodomain helicase DNA binding protein 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 35317 bases
Position: chrLG16:12428932-12464248
Accession: 103477995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016795	ResIII	PF04851.15	5.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000016975	-	6139	XM_008431422	ENSPREP00000016795	1981 (aa)	XP_008429644	UPI0004A26E91

Gene Model

Click here to download ENSPREG00000011359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011359	-	87	94.554	ENSPREG00000001202	chd4a	95	94.554
ENSPREG00000011359	-	84	79.630	ENSPREG00000011044	chd3	91	72.691
ENSPREG00000011359	-	89	65.762	ENSPREG00000014285	-	89	72.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011359	-	92	76.426	ENSG00000111642	CHD4	99	79.687	Homo_sapiens
ENSPREG00000011359	-	86	94.619	ENSAPOG00000008935	chd4a	99	80.404	Acanthochromis_polyacanthus
ENSPREG00000011359	-	86	66.341	ENSAPOG00000020502	-	77	67.589	Acanthochromis_polyacanthus
ENSPREG00000011359	-	89	83.333	ENSAMEG00000014179	-	95	74.729	Ailuropoda_melanoleuca
ENSPREG00000011359	-	97	80.208	ENSACIG00000019310	chd4a	95	87.952	Amphilophus_citrinellus
ENSPREG00000011359	-	89	97.260	ENSACIG00000012387	-	91	88.170	Amphilophus_citrinellus
ENSPREG00000011359	-	100	90.383	ENSAOCG00000000507	-	100	90.176	Amphiprion_ocellaris
ENSPREG00000011359	-	94	83.698	ENSAOCG00000016412	-	97	82.971	Amphiprion_ocellaris
ENSPREG00000011359	-	92	64.325	ENSAPEG00000020306	-	92	80.465	Amphiprion_percula
ENSPREG00000011359	-	96	79.906	ENSAPEG00000001757	chd4a	99	79.678	Amphiprion_percula
ENSPREG00000011359	-	97	86.753	ENSAPEG00000005957	-	100	87.162	Amphiprion_percula
ENSPREG00000011359	-	93	66.811	ENSATEG00000000976	-	94	66.594	Anabas_testudineus
ENSPREG00000011359	-	99	76.148	ENSATEG00000016428	chd4a	96	85.771	Anabas_testudineus
ENSPREG00000011359	-	90	76.162	ENSAPLG00000014146	-	98	72.275	Anas_platyrhynchos
ENSPREG00000011359	-	85	78.149	ENSACAG00000006231	-	98	73.470	Anolis_carolinensis
ENSPREG00000011359	-	92	75.759	ENSANAG00000035685	-	98	74.493	Aotus_nancymaae
ENSPREG00000011359	-	97	87.624	ENSACLG00000024468	-	100	88.367	Astatotilapia_calliptera
ENSPREG00000011359	-	95	78.332	ENSACLG00000015837	chd4a	99	77.766	Astatotilapia_calliptera
ENSPREG00000011359	-	96	78.831	ENSAMXG00000010614	-	95	85.496	Astyanax_mexicanus
ENSPREG00000011359	-	96	79.090	ENSAMXG00000019969	chd4a	98	78.953	Astyanax_mexicanus
ENSPREG00000011359	-	92	76.596	ENSBTAG00000014734	CHD4	95	75.759	Bos_taurus
ENSPREG00000011359	-	92	75.718	ENSCJAG00000008114	-	98	74.216	Callithrix_jacchus
ENSPREG00000011359	-	92	76.596	ENSCHIG00000020766	-	96	75.431	Capra_hircus
ENSPREG00000011359	-	99	72.856	ENSTSYG00000006069	-	95	74.987	Carlito_syrichta
ENSPREG00000011359	-	98	73.214	ENSCPOG00000008504	-	95	75.877	Cavia_porcellus
ENSPREG00000011359	-	92	75.759	ENSCCAG00000009686	-	98	74.380	Cebus_capucinus
ENSPREG00000011359	-	92	75.759	ENSCATG00000006345	-	98	74.519	Cercocebus_atys
ENSPREG00000011359	-	92	76.063	ENSCLAG00000012244	-	98	74.456	Chinchilla_lanigera
ENSPREG00000011359	-	92	76.193	ENSCSAG00000010429	-	98	74.532	Chlorocebus_sabaeus
ENSPREG00000011359	-	74	94.690	ENSCHOG00000000277	-	81	89.431	Choloepus_hoffmanni
ENSPREG00000011359	-	95	75.700	ENSCPBG00000027716	-	94	73.819	Chrysemys_picta_bellii
ENSPREG00000011359	-	87	71.560	ENSCSAVG00000004448	-	87	74.163	Ciona_savignyi
ENSPREG00000011359	-	92	71.692	ENSCANG00000035317	-	98	77.124	Colobus_angolensis_palliatus
ENSPREG00000011359	-	92	75.695	ENSCGRG00001020662	Chd4	95	75.340	Cricetulus_griseus_chok1gshd
ENSPREG00000011359	-	92	76.320	ENSCGRG00000015920	Chd4	96	75.628	Cricetulus_griseus_crigri
ENSPREG00000011359	-	97	86.102	ENSCSEG00000019943	-	100	86.764	Cynoglossus_semilaevis
ENSPREG00000011359	-	88	87.698	ENSCSEG00000017173	chd4a	94	87.698	Cynoglossus_semilaevis
ENSPREG00000011359	-	92	66.450	ENSCSEG00000018096	-	78	67.793	Cynoglossus_semilaevis
ENSPREG00000011359	-	93	66.360	ENSCVAG00000016412	-	88	76.522	Cyprinodon_variegatus
ENSPREG00000011359	-	93	92.920	ENSCVAG00000001128	-	100	89.990	Cyprinodon_variegatus
ENSPREG00000011359	-	89	90.336	ENSCVAG00000004940	chd4a	96	90.336	Cyprinodon_variegatus
ENSPREG00000011359	-	99	76.958	ENSDARG00000063535	chd4a	100	76.969	Danio_rerio
ENSPREG00000011359	-	92	76.043	ENSDNOG00000001134	-	95	75.941	Dasypus_novemcinctus
ENSPREG00000011359	-	85	76.973	ENSDORG00000001847	Chd4	94	75.534	Dipodomys_ordii
ENSPREG00000011359	-	72	72.295	ENSEBUG00000012670	chd4a	92	72.708	Eptatretus_burgeri
ENSPREG00000011359	-	92	75.597	ENSEASG00005016150	-	98	74.278	Equus_asinus_asinus
ENSPREG00000011359	-	92	75.597	ENSECAG00000022005	CHD4	98	74.278	Equus_caballus
ENSPREG00000011359	-	95	82.567	ENSELUG00000018086	-	99	82.775	Esox_lucius
ENSPREG00000011359	-	85	87.747	ENSELUG00000021276	chd4a	91	87.449	Esox_lucius
ENSPREG00000011359	-	92	75.759	ENSFCAG00000006877	-	95	75.812	Felis_catus
ENSPREG00000011359	-	72	81.051	ENSFALG00000004785	-	95	77.792	Ficedula_albicollis
ENSPREG00000011359	-	93	81.795	ENSFHEG00000002013	chd4a	99	81.326	Fundulus_heteroclitus
ENSPREG00000011359	-	84	78.475	ENSFHEG00000003253	-	92	78.475	Fundulus_heteroclitus
ENSPREG00000011359	-	92	94.937	ENSFHEG00000012736	-	99	94.937	Fundulus_heteroclitus
ENSPREG00000011359	-	54	89.232	ENSGMOG00000015722	chd4a	96	89.232	Gadus_morhua
ENSPREG00000011359	-	66	92.857	ENSGMOG00000017923	-	76	83.022	Gadus_morhua
ENSPREG00000011359	-	50	86.290	ENSGMOG00000003394	-	78	86.290	Gadus_morhua
ENSPREG00000011359	-	56	78.284	ENSGALG00000013565	-	97	75.868	Gallus_gallus
ENSPREG00000011359	-	99	76.441	ENSGAFG00000002778	chd4a	99	76.409	Gambusia_affinis
ENSPREG00000011359	-	84	99.153	ENSGAFG00000014337	-	100	99.153	Gambusia_affinis
ENSPREG00000011359	-	87	91.630	ENSGACG00000018705	chd4a	99	78.567	Gasterosteus_aculeatus
ENSPREG00000011359	-	54	87.050	ENSGACG00000010099	-	97	87.050	Gasterosteus_aculeatus
ENSPREG00000011359	-	95	75.713	ENSGAGG00000001416	-	95	73.920	Gopherus_agassizii
ENSPREG00000011359	-	92	76.397	ENSGGOG00000001930	CHD4	98	74.305	Gorilla_gorilla
ENSPREG00000011359	-	89	87.779	ENSHBUG00000019146	chd4a	92	87.779	Haplochromis_burtoni
ENSPREG00000011359	-	96	88.610	ENSHBUG00000016000	-	100	88.610	Haplochromis_burtoni
ENSPREG00000011359	-	92	75.081	ENSHGLG00000003093	-	98	74.545	Heterocephalus_glaber_female
ENSPREG00000011359	-	92	75.081	ENSHGLG00100007450	-	98	74.306	Heterocephalus_glaber_male
ENSPREG00000011359	-	73	70.095	ENSHCOG00000014308	-	88	69.494	Hippocampus_comes
ENSPREG00000011359	-	87	86.854	ENSHCOG00000017525	-	97	91.327	Hippocampus_comes
ENSPREG00000011359	-	99	78.831	ENSIPUG00000005694	chd4	99	79.154	Ictalurus_punctatus
ENSPREG00000011359	-	92	76.281	ENSSTOG00000007601	-	95	75.851	Ictidomys_tridecemlineatus
ENSPREG00000011359	-	92	76.033	ENSJJAG00000012394	Chd4	96	75.466	Jaculus_jaculus
ENSPREG00000011359	-	92	81.272	ENSKMAG00000019286	chd4a	99	86.770	Kryptolebias_marmoratus
ENSPREG00000011359	-	84	80.000	ENSKMAG00000017827	-	90	78.281	Kryptolebias_marmoratus
ENSPREG00000011359	-	100	93.041	ENSKMAG00000007932	-	100	92.789	Kryptolebias_marmoratus
ENSPREG00000011359	-	99	90.973	ENSLBEG00000012434	CHD4	100	90.495	Labrus_bergylta
ENSPREG00000011359	-	77	70.213	ENSLBEG00000026652	-	94	70.033	Labrus_bergylta
ENSPREG00000011359	-	99	73.025	ENSLOCG00000007438	chd4a	99	73.065	Lepisosteus_oculatus
ENSPREG00000011359	-	92	76.971	ENSLAFG00000022842	-	95	73.037	Loxodonta_africana
ENSPREG00000011359	-	92	75.813	ENSMFAG00000003188	-	98	74.519	Macaca_fascicularis
ENSPREG00000011359	-	92	74.893	ENSMMUG00000018685	-	98	73.798	Macaca_mulatta
ENSPREG00000011359	-	92	74.132	ENSMNEG00000044776	-	98	72.557	Macaca_nemestrina
ENSPREG00000011359	-	92	74.403	ENSMLEG00000024661	-	98	73.063	Mandrillus_leucophaeus
ENSPREG00000011359	-	93	64.551	ENSMAMG00000002137	-	89	75.983	Mastacembelus_armatus
ENSPREG00000011359	-	99	79.501	ENSMAMG00000018954	chd4a	98	83.333	Mastacembelus_armatus
ENSPREG00000011359	-	100	91.566	ENSMAMG00000002584	-	100	91.675	Mastacembelus_armatus
ENSPREG00000011359	-	97	88.564	ENSMZEG00005017761	-	100	88.512	Maylandia_zebra
ENSPREG00000011359	-	99	79.133	ENSMZEG00005001706	chd4a	100	79.069	Maylandia_zebra
ENSPREG00000011359	-	92	76.973	ENSMGAG00000014084	-	98	73.830	Meleagris_gallopavo
ENSPREG00000011359	-	92	76.072	ENSMICG00000006588	-	96	75.864	Microcebus_murinus
ENSPREG00000011359	-	92	76.281	ENSMOCG00000020624	Chd4	95	75.667	Microtus_ochrogaster
ENSPREG00000011359	-	73	70.124	ENSMMOG00000013429	-	86	69.691	Mola_mola
ENSPREG00000011359	-	96	86.311	ENSMMOG00000015971	-	99	89.262	Mola_mola
ENSPREG00000011359	-	95	78.586	ENSMMOG00000000073	chd4a	99	78.422	Mola_mola
ENSPREG00000011359	-	82	78.456	ENSMODG00000018094	-	99	78.420	Monodelphis_domestica
ENSPREG00000011359	-	100	92.257	ENSMALG00000022494	-	100	91.529	Monopterus_albus
ENSPREG00000011359	-	88	91.667	ENSMALG00000005766	chd4a	96	80.897	Monopterus_albus
ENSPREG00000011359	-	73	80.096	ENSMUSG00000063870	Chd4	98	74.354	Mus_musculus
ENSPREG00000011359	-	73	80.096	MGP_SPRETEiJ_G0029911	Chd4	98	74.278	Mus_spretus
ENSPREG00000011359	-	92	76.139	ENSMPUG00000016859	-	95	75.812	Mustela_putorius_furo
ENSPREG00000011359	-	92	76.410	ENSMLUG00000014343	-	95	75.720	Myotis_lucifugus
ENSPREG00000011359	-	85	87.712	ENSNGAG00000016920	Chd4	95	74.254	Nannospalax_galili
ENSPREG00000011359	-	96	88.622	ENSNBRG00000021576	-	100	88.570	Neolamprologus_brichardi
ENSPREG00000011359	-	92	75.651	ENSNLEG00000004330	-	92	75.485	Nomascus_leucogenys
ENSPREG00000011359	-	71	91.057	ENSMEUG00000015294	-	80	91.057	Notamacropus_eugenii
ENSPREG00000011359	-	75	96.296	ENSOPRG00000003477	-	75	96.296	Ochotona_princeps
ENSPREG00000011359	-	92	76.250	ENSODEG00000003114	-	98	74.607	Octodon_degus
ENSPREG00000011359	-	99	90.239	ENSONIG00000012953	-	99	91.818	Oreochromis_niloticus
ENSPREG00000011359	-	99	79.547	ENSONIG00000006992	chd4a	100	79.279	Oreochromis_niloticus
ENSPREG00000011359	-	92	75.776	ENSOCUG00000008215	-	95	74.594	Oryctolagus_cuniculus
ENSPREG00000011359	-	84	80.465	ENSORLG00000017190	-	90	80.465	Oryzias_latipes
ENSPREG00000011359	-	100	91.570	ENSORLG00000012477	-	100	91.217	Oryzias_latipes
ENSPREG00000011359	-	99	78.546	ENSORLG00000006310	chd4a	100	78.929	Oryzias_latipes
ENSPREG00000011359	-	73	70.819	ENSORLG00020011739	-	87	70.227	Oryzias_latipes_hni
ENSPREG00000011359	-	100	91.519	ENSORLG00020004891	-	100	91.166	Oryzias_latipes_hni
ENSPREG00000011359	-	100	78.439	ENSORLG00020006529	chd4a	100	78.887	Oryzias_latipes_hni
ENSPREG00000011359	-	99	78.496	ENSORLG00015019674	chd4a	100	78.879	Oryzias_latipes_hsok
ENSPREG00000011359	-	100	91.671	ENSORLG00015010692	-	100	91.267	Oryzias_latipes_hsok
ENSPREG00000011359	-	99	79.440	ENSOMEG00000016394	chd4a	97	88.189	Oryzias_melastigma
ENSPREG00000011359	-	89	67.568	ENSOMEG00000014929	-	91	77.193	Oryzias_melastigma
ENSPREG00000011359	-	99	86.609	ENSOMEG00000013408	-	97	85.584	Oryzias_melastigma
ENSPREG00000011359	-	92	75.094	ENSOGAG00000010031	-	95	75.052	Otolemur_garnettii
ENSPREG00000011359	-	92	76.512	ENSOARG00000007398	-	97	75.680	Ovis_aries
ENSPREG00000011359	-	92	76.180	ENSPPAG00000029007	-	98	74.329	Pan_paniscus
ENSPREG00000011359	-	92	75.813	ENSPPRG00000001388	-	98	73.510	Panthera_pardus
ENSPREG00000011359	-	92	76.072	ENSPTIG00000010979	-	95	75.812	Panthera_tigris_altaica
ENSPREG00000011359	-	92	76.397	ENSPTRG00000004580	CHD4	98	74.305	Pan_troglodytes
ENSPREG00000011359	-	92	75.868	ENSPANG00000025409	-	98	74.380	Papio_anubis
ENSPREG00000011359	-	96	69.561	ENSPKIG00000012023	-	99	68.858	Paramormyrops_kingsleyae
ENSPREG00000011359	-	99	82.098	ENSPKIG00000008268	chd4a	99	81.316	Paramormyrops_kingsleyae
ENSPREG00000011359	-	95	74.293	ENSPSIG00000015546	-	79	76.690	Pelodiscus_sinensis
ENSPREG00000011359	-	92	77.597	ENSPMGG00000022981	chd4a	97	76.898	Periophthalmus_magnuspinnatus
ENSPREG00000011359	-	87	64.557	ENSPMGG00000007681	-	94	80.723	Periophthalmus_magnuspinnatus
ENSPREG00000011359	-	79	68.861	ENSPFOG00000016981	-	92	66.087	Poecilia_formosa
ENSPREG00000011359	-	97	99.166	ENSPFOG00000013889	-	99	99.166	Poecilia_formosa
ENSPREG00000011359	-	99	78.905	ENSPFOG00000009089	chd4a	100	78.675	Poecilia_formosa
ENSPREG00000011359	-	92	94.554	ENSPLAG00000012712	chd4a	95	94.554	Poecilia_latipinna
ENSPREG00000011359	-	100	99.192	ENSPLAG00000004006	-	100	99.192	Poecilia_latipinna
ENSPREG00000011359	-	91	93.750	ENSPMEG00000009633	chd4a	94	87.917	Poecilia_mexicana
ENSPREG00000011359	-	92	91.810	ENSPMEG00000006064	-	98	91.395	Poecilia_mexicana
ENSPREG00000011359	-	92	74.665	ENSPPYG00000004192	-	96	74.404	Pongo_abelii
ENSPREG00000011359	-	71	87.349	ENSPCAG00000007120	-	83	87.349	Procavia_capensis
ENSPREG00000011359	-	92	76.240	ENSPCOG00000018635	-	96	75.812	Propithecus_coquereli
ENSPREG00000011359	-	92	75.094	ENSPVAG00000012574	-	97	74.793	Pteropus_vampyrus
ENSPREG00000011359	-	100	92.056	ENSPNYG00000023020	-	100	91.612	Pundamilia_nyererei
ENSPREG00000011359	-	95	79.483	ENSPNYG00000002663	chd4a	98	79.160	Pundamilia_nyererei
ENSPREG00000011359	-	96	79.481	ENSPNAG00000011129	-	99	79.130	Pygocentrus_nattereri
ENSPREG00000011359	-	99	80.161	ENSPNAG00000009629	chd4a	94	87.402	Pygocentrus_nattereri
ENSPREG00000011359	-	98	73.711	ENSRNOG00000018309	Chd4	96	75.534	Rattus_norvegicus
ENSPREG00000011359	-	90	75.209	ENSRBIG00000041491	-	98	74.165	Rhinopithecus_bieti
ENSPREG00000011359	-	92	75.815	ENSRROG00000042446	-	98	74.569	Rhinopithecus_roxellana
ENSPREG00000011359	-	85	85.714	ENSSBOG00000020782	-	96	75.904	Saimiri_boliviensis_boliviensis
ENSPREG00000011359	-	61	86.087	ENSSHAG00000015079	-	90	86.087	Sarcophilus_harrisii
ENSPREG00000011359	-	99	80.840	ENSSFOG00015002908	chd4	97	88.095	Scleropages_formosus
ENSPREG00000011359	-	87	96.154	ENSSMAG00000012594	chd4a	99	78.301	Scophthalmus_maximus
ENSPREG00000011359	-	92	65.189	ENSSMAG00000017926	-	92	64.645	Scophthalmus_maximus
ENSPREG00000011359	-	96	87.213	ENSSMAG00000010969	-	99	86.411	Scophthalmus_maximus
ENSPREG00000011359	-	86	94.954	ENSSDUG00000002891	chd4a	97	79.489	Seriola_dumerili
ENSPREG00000011359	-	93	92.372	ENSSDUG00000012051	-	99	92.673	Seriola_dumerili
ENSPREG00000011359	-	93	96.283	ENSSLDG00000023821	-	95	96.935	Seriola_lalandi_dorsalis
ENSPREG00000011359	-	93	65.897	ENSSLDG00000019750	-	93	69.132	Seriola_lalandi_dorsalis
ENSPREG00000011359	-	87	92.920	ENSSLDG00000018645	chd4a	98	76.566	Seriola_lalandi_dorsalis
ENSPREG00000011359	-	60	90.173	ENSSARG00000012988	-	68	90.173	Sorex_araneus
ENSPREG00000011359	-	92	76.302	ENSSPUG00000015131	-	98	73.160	Sphenodon_punctatus
ENSPREG00000011359	-	92	65.052	ENSSPAG00000018749	-	94	66.685	Stegastes_partitus
ENSPREG00000011359	-	90	90.278	ENSSPAG00000013983	chd4a	98	90.278	Stegastes_partitus
ENSPREG00000011359	-	92	77.502	ENSSSCG00000000697	-	95	75.864	Sus_scrofa
ENSPREG00000011359	-	92	76.464	ENSTGUG00000013329	-	98	73.785	Taeniopygia_guttata
ENSPREG00000011359	-	92	87.868	ENSTRUG00000007202	-	100	83.859	Takifugu_rubripes
ENSPREG00000011359	-	85	80.465	ENSTRUG00000007623	-	87	80.465	Takifugu_rubripes
ENSPREG00000011359	-	97	63.529	ENSTNIG00000004095	-	87	81.782	Tetraodon_nigroviridis
ENSPREG00000011359	-	97	87.474	ENSTNIG00000008031	-	99	86.646	Tetraodon_nigroviridis
ENSPREG00000011359	-	83	77.270	ENSTBEG00000011379	-	90	77.300	Tupaia_belangeri
ENSPREG00000011359	-	94	94.872	ENSTTRG00000016102	-	97	70.951	Tursiops_truncatus
ENSPREG00000011359	-	85	86.777	ENSUAMG00000016452	-	96	85.638	Ursus_americanus
ENSPREG00000011359	-	89	83.333	ENSUMAG00000005336	-	93	86.777	Ursus_maritimus
ENSPREG00000011359	-	63	79.760	ENSXETG00000026410	chd4	99	85.844	Xenopus_tropicalis
ENSPREG00000011359	-	92	92.497	ENSXCOG00000019269	-	97	92.108	Xiphophorus_couchianus
ENSPREG00000011359	-	92	92.257	ENSXMAG00000011263	-	97	91.867	Xiphophorus_maculatus
ENSPREG00000011359	-	76	82.709	ENSXMAG00000001037	chd4a	94	81.978	Xiphophorus_maculatus
ENSPREG00000011359	-	84	80.841	ENSXMAG00000014686	-	95	71.429	Xiphophorus_maculatus