EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000011481 (Gene tree)
Gene ID: 103471579
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12800 bases
Position: chrLG10:16188279-16201078
Accession: 103471579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000016984	RRM_1	PF00076.22	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017164	-	1671	XM_008420665	ENSPREP00000016984	556 (aa)	XP_008418887	UPI0004A4BC68

Gene Model

Click here to download ENSPREG00000011481's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011481	cstf2	97	60.272	ENSG00000101811	CSTF2	81	91.803	Homo_sapiens
ENSPREG00000011481	cstf2	97	81.296	ENSAPOG00000005630	cstf2	65	91.291	Acanthochromis_polyacanthus
ENSPREG00000011481	cstf2	97	59.008	ENSAMEG00000002082	CSTF2	60	66.667	Ailuropoda_melanoleuca
ENSPREG00000011481	cstf2	97	73.048	ENSACIG00000012852	cstf2	66	82.388	Amphilophus_citrinellus
ENSPREG00000011481	cstf2	100	81.329	ENSAOCG00000020905	cstf2	65	91.566	Amphiprion_ocellaris
ENSPREG00000011481	cstf2	100	81.329	ENSAPEG00000006526	cstf2	65	91.566	Amphiprion_percula
ENSPREG00000011481	cstf2	100	78.826	ENSATEG00000018186	cstf2	91	84.639	Anabas_testudineus
ENSPREG00000011481	cstf2	97	59.619	ENSANAG00000022342	CSTF2	94	62.240	Aotus_nancymaae
ENSPREG00000011481	cstf2	100	78.533	ENSACLG00000000779	cstf2	63	89.759	Astatotilapia_calliptera
ENSPREG00000011481	cstf2	73	87.356	ENSAMXG00000021477	cstf2	91	100.000	Astyanax_mexicanus
ENSPREG00000011481	cstf2	97	60.727	ENSBTAG00000003547	CSTF2	59	69.851	Bos_taurus
ENSPREG00000011481	cstf2	77	71.753	ENSCJAG00000004422	CSTF2	79	80.321	Callithrix_jacchus
ENSPREG00000011481	cstf2	97	60.929	ENSCAFG00000017551	CSTF2	58	71.726	Canis_familiaris
ENSPREG00000011481	cstf2	97	60.167	ENSCAFG00020007619	CSTF2	94	62.760	Canis_lupus_dingo
ENSPREG00000011481	cstf2	97	60.554	ENSCHIG00000016994	CSTF2	59	70.149	Capra_hircus
ENSPREG00000011481	cstf2	97	59.966	ENSTSYG00000006529	CSTF2	58	71.429	Carlito_syrichta
ENSPREG00000011481	cstf2	97	60.000	ENSCPOG00000015255	CSTF2	84	92.810	Cavia_porcellus
ENSPREG00000011481	cstf2	97	59.792	ENSCCAG00000032975	CSTF2	58	71.429	Cebus_capucinus
ENSPREG00000011481	cstf2	97	61.770	ENSCATG00000022835	CSTF2	59	71.429	Cercocebus_atys
ENSPREG00000011481	cstf2	97	60.410	ENSCLAG00000001904	CSTF2	85	91.026	Chinchilla_lanigera
ENSPREG00000011481	cstf2	97	59.211	ENSCSAG00000010360	CSTF2	59	67.606	Chlorocebus_sabaeus
ENSPREG00000011481	cstf2	97	61.336	ENSCANG00000030612	CSTF2	59	71.429	Colobus_angolensis_palliatus
ENSPREG00000011481	cstf2	57	70.520	ENSCGRG00001023023	Cstf2	59	71.053	Cricetulus_griseus_chok1gshd
ENSPREG00000011481	cstf2	57	70.231	ENSCGRG00000003897	Cstf2	61	70.760	Cricetulus_griseus_crigri
ENSPREG00000011481	cstf2	97	83.148	ENSCVAG00000005731	cstf2	66	93.114	Cyprinodon_variegatus
ENSPREG00000011481	cstf2	80	100.000	ENSDARG00000090788	cstf2	97	76.286	Danio_rerio
ENSPREG00000011481	cstf2	97	61.274	ENSDORG00000007195	Cstf2	83	92.715	Dipodomys_ordii
ENSPREG00000011481	cstf2	67	84.483	ENSETEG00000004931	CSTF2	64	84.483	Echinops_telfairi
ENSPREG00000011481	cstf2	97	58.292	ENSEASG00005001216	CSTF2	59	67.606	Equus_asinus_asinus
ENSPREG00000011481	cstf2	97	58.292	ENSECAG00000009325	CSTF2	58	71.726	Equus_caballus
ENSPREG00000011481	cstf2	97	60.000	ENSFCAG00000007000	CSTF2	58	71.726	Felis_catus
ENSPREG00000011481	cstf2	97	60.135	ENSFDAG00000002416	CSTF2	94	62.500	Fukomys_damarensis
ENSPREG00000011481	cstf2	97	82.396	ENSFHEG00000017065	cstf2	63	89.021	Fundulus_heteroclitus
ENSPREG00000011481	cstf2	96	66.419	ENSGMOG00000005145	cstf2	65	74.074	Gadus_morhua
ENSPREG00000011481	cstf2	97	59.076	ENSGALG00000006760	CSTF2	86	82.609	Gallus_gallus
ENSPREG00000011481	cstf2	97	83.054	ENSGAFG00000020027	cstf2	63	90.332	Gambusia_affinis
ENSPREG00000011481	cstf2	97	70.107	ENSGACG00000017326	cstf2	86	87.449	Gasterosteus_aculeatus
ENSPREG00000011481	cstf2	97	61.511	ENSGGOG00000022267	CSTF2	57	73.750	Gorilla_gorilla
ENSPREG00000011481	cstf2	100	78.610	ENSHBUG00000016183	cstf2	63	90.448	Haplochromis_burtoni
ENSPREG00000011481	cstf2	97	60.000	ENSHGLG00000000659	-	86	89.506	Heterocephalus_glaber_female
ENSPREG00000011481	cstf2	97	53.345	ENSHGLG00000013455	-	58	61.791	Heterocephalus_glaber_female
ENSPREG00000011481	cstf2	97	60.000	ENSHGLG00100001130	-	86	89.506	Heterocephalus_glaber_male
ENSPREG00000011481	cstf2	97	53.345	ENSHGLG00100015391	-	58	61.791	Heterocephalus_glaber_male
ENSPREG00000011481	cstf2	97	76.753	ENSHCOG00000005157	cstf2	65	87.952	Hippocampus_comes
ENSPREG00000011481	cstf2	97	60.929	ENSSTOG00000023445	CSTF2	85	91.026	Ictidomys_tridecemlineatus
ENSPREG00000011481	cstf2	97	60.204	ENSJJAG00000020507	Cstf2	85	91.026	Jaculus_jaculus
ENSPREG00000011481	cstf2	100	76.208	ENSKMAG00000001068	cstf2	65	83.533	Kryptolebias_marmoratus
ENSPREG00000011481	cstf2	97	60.749	ENSLACG00000015927	CSTF2	58	69.388	Latimeria_chalumnae
ENSPREG00000011481	cstf2	96	83.824	ENSLOCG00000015300	cstf2	60	83.824	Lepisosteus_oculatus
ENSPREG00000011481	cstf2	97	59.760	ENSLAFG00000000474	CSTF2	60	70.930	Loxodonta_africana
ENSPREG00000011481	cstf2	97	61.336	ENSMFAG00000043888	CSTF2	59	71.429	Macaca_fascicularis
ENSPREG00000011481	cstf2	97	61.336	ENSMMUG00000013008	CSTF2	60	67.606	Macaca_mulatta
ENSPREG00000011481	cstf2	97	61.336	ENSMNEG00000041824	CSTF2	58	71.429	Macaca_nemestrina
ENSPREG00000011481	cstf2	97	61.336	ENSMLEG00000036870	CSTF2	59	71.429	Mandrillus_leucophaeus
ENSPREG00000011481	cstf2	95	80.835	ENSMAMG00000020364	cstf2	64	90.031	Mastacembelus_armatus
ENSPREG00000011481	cstf2	100	78.533	ENSMZEG00005007200	cstf2	65	89.759	Maylandia_zebra
ENSPREG00000011481	cstf2	91	70.732	ENSMGAG00000004139	CSTF2	86	81.429	Meleagris_gallopavo
ENSPREG00000011481	cstf2	57	70.317	ENSMAUG00000000965	Cstf2	59	69.096	Mesocricetus_auratus
ENSPREG00000011481	cstf2	97	61.379	ENSMICG00000014121	CSTF2	94	63.281	Microcebus_murinus
ENSPREG00000011481	cstf2	57	70.029	ENSMOCG00000008081	Cstf2	59	68.713	Microtus_ochrogaster
ENSPREG00000011481	cstf2	100	67.504	ENSMMOG00000000538	cstf2	66	78.614	Mola_mola
ENSPREG00000011481	cstf2	84	63.636	MGP_CAROLIEiJ_G0033383	Cstf2	84	92.258	Mus_caroli
ENSPREG00000011481	cstf2	57	71.687	ENSMUSG00000031256	Cstf2	84	92.258	Mus_musculus
ENSPREG00000011481	cstf2	84	63.636	MGP_PahariEiJ_G0031923	Cstf2	82	62.755	Mus_pahari
ENSPREG00000011481	cstf2	84	63.636	MGP_SPRETEiJ_G0034548	Cstf2	84	92.258	Mus_spretus
ENSPREG00000011481	cstf2	97	56.872	ENSMPUG00000002339	CSTF2	81	62.402	Mustela_putorius_furo
ENSPREG00000011481	cstf2	97	56.378	ENSMLUG00000004598	CSTF2	80	61.519	Myotis_lucifugus
ENSPREG00000011481	cstf2	56	71.386	ENSNGAG00000021985	Cstf2	58	71.940	Nannospalax_galili
ENSPREG00000011481	cstf2	93	68.774	ENSNBRG00000021694	cstf2	71	86.250	Neolamprologus_brichardi
ENSPREG00000011481	cstf2	97	61.160	ENSNLEG00000007510	CSTF2	59	71.429	Nomascus_leucogenys
ENSPREG00000011481	cstf2	79	60.554	ENSMEUG00000011186	-	59	74.006	Notamacropus_eugenii
ENSPREG00000011481	cstf2	97	59.790	ENSMEUG00000007875	-	59	73.089	Notamacropus_eugenii
ENSPREG00000011481	cstf2	88	55.696	ENSMEUG00000014025	-	57	70.213	Notamacropus_eugenii
ENSPREG00000011481	cstf2	83	76.410	ENSOPRG00000003106	CSTF2	70	75.635	Ochotona_princeps
ENSPREG00000011481	cstf2	97	60.477	ENSODEG00000002059	CSTF2	58	71.726	Octodon_degus
ENSPREG00000011481	cstf2	97	62.033	ENSONIG00000002631	cstf2	73	97.101	Oreochromis_niloticus
ENSPREG00000011481	cstf2	86	84.615	ENSOANG00000004208	CSTF2	60	86.207	Ornithorhynchus_anatinus
ENSPREG00000011481	cstf2	97	60.309	ENSOCUG00000010468	CSTF2	58	71.642	Oryctolagus_cuniculus
ENSPREG00000011481	cstf2	97	77.122	ENSORLG00000001380	cstf2	65	86.607	Oryzias_latipes
ENSPREG00000011481	cstf2	97	77.122	ENSORLG00020021917	cstf2	65	86.607	Oryzias_latipes_hni
ENSPREG00000011481	cstf2	97	77.306	ENSORLG00015011996	cstf2	65	86.905	Oryzias_latipes_hsok
ENSPREG00000011481	cstf2	100	79.041	ENSOMEG00000015507	cstf2	66	86.391	Oryzias_melastigma
ENSPREG00000011481	cstf2	97	53.083	ENSOGAG00000011192	CSTF2	95	61.224	Otolemur_garnettii
ENSPREG00000011481	cstf2	97	60.554	ENSOARG00000001022	CSTF2	59	70.149	Ovis_aries
ENSPREG00000011481	cstf2	97	61.511	ENSPPAG00000031804	CSTF2	57	73.750	Pan_paniscus
ENSPREG00000011481	cstf2	97	60.000	ENSPPRG00000022492	CSTF2	58	71.726	Panthera_pardus
ENSPREG00000011481	cstf2	97	59.487	ENSPTIG00000009922	CSTF2	58	71.131	Panthera_tigris_altaica
ENSPREG00000011481	cstf2	97	61.511	ENSPTRG00000022090	CSTF2	57	73.750	Pan_troglodytes
ENSPREG00000011481	cstf2	97	61.336	ENSPANG00000002303	CSTF2	94	62.500	Papio_anubis
ENSPREG00000011481	cstf2	100	66.667	ENSPKIG00000005033	cstf2	63	76.488	Paramormyrops_kingsleyae
ENSPREG00000011481	cstf2	97	75.774	ENSPMGG00000006534	cstf2	67	85.131	Periophthalmus_magnuspinnatus
ENSPREG00000011481	cstf2	57	70.029	ENSPEMG00000019415	Cstf2	59	69.006	Peromyscus_maniculatus_bairdii
ENSPREG00000011481	cstf2	79	61.077	ENSPCIG00000002989	CSTF2	50	72.930	Phascolarctos_cinereus
ENSPREG00000011481	cstf2	100	89.785	ENSPLAG00000011176	cstf2	100	89.785	Poecilia_latipinna
ENSPREG00000011481	cstf2	100	89.928	ENSPMEG00000017743	cstf2	100	89.928	Poecilia_mexicana
ENSPREG00000011481	cstf2	97	59.539	ENSPPYG00000020541	CSTF2	59	67.606	Pongo_abelii
ENSPREG00000011481	cstf2	97	60.877	ENSPCOG00000027744	CSTF2	59	72.024	Propithecus_coquereli
ENSPREG00000011481	cstf2	100	70.357	ENSPNYG00000010852	cstf2	64	85.093	Pundamilia_nyererei
ENSPREG00000011481	cstf2	84	58.065	ENSRNOG00000048025	Cstf2	69	68.044	Rattus_norvegicus
ENSPREG00000011481	cstf2	97	61.307	ENSRBIG00000030745	CSTF2	65	67.606	Rhinopithecus_bieti
ENSPREG00000011481	cstf2	97	61.336	ENSRROG00000045042	CSTF2	59	71.429	Rhinopithecus_roxellana
ENSPREG00000011481	cstf2	97	59.792	ENSSBOG00000021649	CSTF2	94	62.500	Saimiri_boliviensis_boliviensis
ENSPREG00000011481	cstf2	87	82.692	ENSSHAG00000003681	CSTF2	62	84.483	Sarcophilus_harrisii
ENSPREG00000011481	cstf2	97	67.500	ENSSFOG00015006348	cstf2	65	78.313	Scleropages_formosus
ENSPREG00000011481	cstf2	100	78.097	ENSSMAG00000013463	cstf2	65	90.361	Scophthalmus_maximus
ENSPREG00000011481	cstf2	69	82.677	ENSSPUG00000005288	-	84	83.133	Sphenodon_punctatus
ENSPREG00000011481	cstf2	97	60.727	ENSSSCG00000012486	CSTF2	83	81.481	Sus_scrofa
ENSPREG00000011481	cstf2	97	59.241	ENSTGUG00000002253	CSTF2	58	73.607	Taeniopygia_guttata
ENSPREG00000011481	cstf2	98	72.875	ENSTNIG00000016860	cstf2	65	82.515	Tetraodon_nigroviridis
ENSPREG00000011481	cstf2	97	60.413	ENSTTRG00000013556	CSTF2	58	70.149	Tursiops_truncatus
ENSPREG00000011481	cstf2	97	59.966	ENSUAMG00000026605	CSTF2	81	62.500	Ursus_americanus
ENSPREG00000011481	cstf2	97	58.714	ENSUMAG00000012417	CSTF2	88	79.920	Ursus_maritimus
ENSPREG00000011481	cstf2	66	70.536	ENSVPAG00000006466	CSTF2	67	69.254	Vicugna_pacos
ENSPREG00000011481	cstf2	97	60.757	ENSVVUG00000004717	CSTF2	58	71.429	Vulpes_vulpes
ENSPREG00000011481	cstf2	89	80.882	ENSXETG00000009642	cstf2	65	80.882	Xenopus_tropicalis
ENSPREG00000011481	cstf2	97	69.512	ENSXCOG00000016436	cstf2	94	98.824	Xiphophorus_couchianus
ENSPREG00000011481	cstf2	100	97.122	ENSXMAG00000013524	cstf2	100	97.122	Xiphophorus_maculatus