EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000011589 (Gene tree)
Gene ID: 103473729
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 13810 bases
Position: chrLG12:16135670-16149479
Accession: 103473729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017143	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017325	-	5451	XM_008424175	ENSPREP00000017143	1816 (aa)	XP_008422397	UPI0004A44511

Gene Model

Click here to download ENSPREG00000011589's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011589	setd1ba	50	83.228	ENSG00000139718	SETD1B	90	53.352	Homo_sapiens
ENSPREG00000011589	setd1ba	100	79.295	ENSAPOG00000014731	setd1ba	100	78.428	Acanthochromis_polyacanthus
ENSPREG00000011589	setd1ba	100	73.501	ENSACIG00000016453	setd1ba	56	81.800	Amphilophus_citrinellus
ENSPREG00000011589	setd1ba	97	78.412	ENSAOCG00000012148	setd1ba	99	78.356	Amphiprion_ocellaris
ENSPREG00000011589	setd1ba	100	76.931	ENSAPEG00000010762	setd1ba	55	80.868	Amphiprion_percula
ENSPREG00000011589	setd1ba	90	81.832	ENSATEG00000021563	setd1ba	98	82.317	Anabas_testudineus
ENSPREG00000011589	setd1ba	87	57.073	ENSAPLG00000005217	SETD1B	86	56.364	Anas_platyrhynchos
ENSPREG00000011589	setd1ba	50	82.278	ENSANAG00000027480	SETD1B	89	53.352	Aotus_nancymaae
ENSPREG00000011589	setd1ba	100	78.339	ENSACLG00000016584	setd1ba	100	78.339	Astatotilapia_calliptera
ENSPREG00000011589	setd1ba	50	82.278	ENSCJAG00000016930	SETD1B	87	56.847	Callithrix_jacchus
ENSPREG00000011589	setd1ba	53	80.547	ENSCAFG00000008167	SETD1B	87	57.278	Canis_familiaris
ENSPREG00000011589	setd1ba	62	69.733	ENSCAFG00020016619	SETD1B	82	51.875	Canis_lupus_dingo
ENSPREG00000011589	setd1ba	50	82.595	ENSCCAG00000031928	SETD1B	87	57.006	Cebus_capucinus
ENSPREG00000011589	setd1ba	66	69.112	ENSCANG00000023445	SETD1B	77	66.545	Colobus_angolensis_palliatus
ENSPREG00000011589	setd1ba	100	81.540	ENSCVAG00000022068	setd1ba	99	81.649	Cyprinodon_variegatus
ENSPREG00000011589	setd1ba	55	64.244	ENSDARG00000060847	setd1ba	53	64.447	Danio_rerio
ENSPREG00000011589	setd1ba	50	81.538	ENSECAG00000006549	SETD1B	83	56.735	Equus_caballus
ENSPREG00000011589	setd1ba	51	80.793	ENSFCAG00000013185	SETD1B	91	53.221	Felis_catus
ENSPREG00000011589	setd1ba	62	75.802	ENSFDAG00000015120	SETD1B	73	74.571	Fukomys_damarensis
ENSPREG00000011589	setd1ba	100	83.860	ENSFHEG00000013126	setd1ba	100	85.613	Fundulus_heteroclitus
ENSPREG00000011589	setd1ba	52	89.841	ENSGMOG00000009831	setd1ba	59	89.841	Gadus_morhua
ENSPREG00000011589	setd1ba	94	94.472	ENSGAFG00000008712	setd1ba	95	94.756	Gambusia_affinis
ENSPREG00000011589	setd1ba	54	76.364	ENSGACG00000017002	setd1ba	57	76.364	Gasterosteus_aculeatus
ENSPREG00000011589	setd1ba	100	78.870	ENSHBUG00000019992	setd1ba	100	78.183	Haplochromis_burtoni
ENSPREG00000011589	setd1ba	56	41.667	ENSIPUG00000003992	-	59	46.970	Ictalurus_punctatus
ENSPREG00000011589	setd1ba	54	80.386	ENSKMAG00000007804	setd1ba	54	79.763	Kryptolebias_marmoratus
ENSPREG00000011589	setd1ba	100	72.348	ENSLBEG00000020113	setd1ba	54	76.089	Labrus_bergylta
ENSPREG00000011589	setd1ba	69	80.189	ENSLAFG00000026518	SETD1B	73	78.528	Loxodonta_africana
ENSPREG00000011589	setd1ba	62	57.825	ENSMFAG00000030930	SETD1B	90	54.054	Macaca_fascicularis
ENSPREG00000011589	setd1ba	52	49.853	ENSMNEG00000014228	SETD1B	51	50.984	Macaca_nemestrina
ENSPREG00000011589	setd1ba	100	78.339	ENSMZEG00005026617	setd1ba	100	78.339	Maylandia_zebra
ENSPREG00000011589	setd1ba	50	82.911	ENSMICG00000001152	SETD1B	89	53.221	Microcebus_murinus
ENSPREG00000011589	setd1ba	54	80.808	ENSMMOG00000008190	setd1ba	55	80.413	Mola_mola
ENSPREG00000011589	setd1ba	100	77.302	ENSMALG00000005362	setd1ba	100	77.056	Monopterus_albus
ENSPREG00000011589	setd1ba	100	78.067	ENSNBRG00000002915	setd1ba	55	82.480	Neolamprologus_brichardi
ENSPREG00000011589	setd1ba	50	79.091	ENSODEG00000010155	SETD1B	83	53.333	Octodon_degus
ENSPREG00000011589	setd1ba	100	78.211	ENSONIG00000013898	setd1ba	99	78.025	Oreochromis_niloticus
ENSPREG00000011589	setd1ba	55	76.710	ENSORLG00000008435	setd1ba	55	76.680	Oryzias_latipes
ENSPREG00000011589	setd1ba	100	72.579	ENSORLG00020017079	setd1ba	100	72.180	Oryzias_latipes_hni
ENSPREG00000011589	setd1ba	67	72.354	ENSORLG00015004156	setd1ba	98	72.190	Oryzias_latipes_hsok
ENSPREG00000011589	setd1ba	100	73.282	ENSOMEG00000002270	setd1ba	100	73.355	Oryzias_melastigma
ENSPREG00000011589	setd1ba	50	82.965	ENSOGAG00000034809	SETD1B	86	52.804	Otolemur_garnettii
ENSPREG00000011589	setd1ba	50	82.595	ENSPPAG00000043308	SETD1B	90	52.552	Pan_paniscus
ENSPREG00000011589	setd1ba	50	83.228	ENSPTRG00000005567	SETD1B	91	52.828	Pan_troglodytes
ENSPREG00000011589	setd1ba	87	77.926	ENSPMGG00000011527	setd1ba	91	77.926	Periophthalmus_magnuspinnatus
ENSPREG00000011589	setd1ba	64	80.635	ENSPCIG00000028605	SETD1B	87	57.323	Phascolarctos_cinereus
ENSPREG00000011589	setd1ba	100	97.801	ENSPFOG00000019768	setd1ba	100	97.801	Poecilia_formosa
ENSPREG00000011589	setd1ba	100	97.141	ENSPLAG00000023459	setd1ba	100	97.141	Poecilia_latipinna
ENSPREG00000011589	setd1ba	100	97.746	ENSPMEG00000020446	setd1ba	100	97.746	Poecilia_mexicana
ENSPREG00000011589	setd1ba	59	69.536	ENSPCOG00000020896	SETD1A	66	69.055	Propithecus_coquereli
ENSPREG00000011589	setd1ba	100	78.043	ENSPNYG00000009484	setd1ba	56	82.579	Pundamilia_nyererei
ENSPREG00000011589	setd1ba	77	57.833	ENSPNAG00000016011	setd1ba	99	58.621	Pygocentrus_nattereri
ENSPREG00000011589	setd1ba	65	82.595	ENSSBOG00000033322	SETD1B	84	54.303	Saimiri_boliviensis_boliviensis
ENSPREG00000011589	setd1ba	79	69.949	ENSSFOG00015004814	SETD1B	88	76.369	Scleropages_formosus
ENSPREG00000011589	setd1ba	94	83.202	ENSSDUG00000018313	setd1ba	100	77.144	Seriola_dumerili
ENSPREG00000011589	setd1ba	51	63.000	ENSSPUG00000011847	SETD1B	84	56.152	Sphenodon_punctatus
ENSPREG00000011589	setd1ba	100	80.033	ENSSPAG00000015470	setd1ba	100	79.924	Stegastes_partitus
ENSPREG00000011589	setd1ba	66	80.488	ENSSSCG00000009806	SETD1B	90	60.348	Sus_scrofa
ENSPREG00000011589	setd1ba	66	80.183	ENSUAMG00000008729	SETD1B	79	57.735	Ursus_americanus
ENSPREG00000011589	setd1ba	96	55.522	ENSXETG00000003760	setd1b	85	57.369	Xenopus_tropicalis
ENSPREG00000011589	setd1ba	100	91.812	ENSXCOG00000004451	setd1ba	99	92.635	Xiphophorus_couchianus
ENSPREG00000011589	setd1ba	99	95.778	ENSXMAG00000014097	setd1ba	100	95.778	Xiphophorus_maculatus