EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000011621 (Gene tree)
Gene ID: 103471570
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5701 bases
Position: chrLG10:16312535-16318235
Accession: 103471570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017211	MTS	PF05175.14	7.5e-05	1	1
ENSPREP00000017228	MTS	PF05175.14	0.00014	1	1
ENSPREP00000017228	Met_10	PF02475.16	1e-30	1	1
ENSPREP00000017211	Met_10	PF02475.16	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017395	-	1203	-	ENSPREP00000017211	400 (aa)	-	-
ENSPRET00000017412	-	1197	XM_008420653	ENSPREP00000017228	398 (aa)	XP_008418875	-

Gene Model

Click here to download ENSPREG00000011621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011621	trmt12	96	49.153	ENSG00000183665	TRMT12	79	62.500	Homo_sapiens
ENSPREG00000011621	trmt12	100	74.129	ENSAPOG00000011979	trmt12	100	73.632	Acanthochromis_polyacanthus
ENSPREG00000011621	trmt12	96	49.157	ENSAMEG00000019612	TRMT12	92	48.426	Ailuropoda_melanoleuca
ENSPREG00000011621	trmt12	95	75.131	ENSACIG00000012982	trmt12	99	74.607	Amphilophus_citrinellus
ENSPREG00000011621	trmt12	100	74.372	ENSAOCG00000020570	trmt12	100	73.869	Amphiprion_ocellaris
ENSPREG00000011621	trmt12	100	74.121	ENSAPEG00000006335	trmt12	100	73.869	Amphiprion_percula
ENSPREG00000011621	trmt12	100	72.593	ENSATEG00000018316	trmt12	100	72.593	Anabas_testudineus
ENSPREG00000011621	trmt12	100	74.378	ENSACLG00000001008	trmt12	100	73.881	Astatotilapia_calliptera
ENSPREG00000011621	trmt12	99	56.190	ENSAMXG00000040366	trmt12	99	55.952	Astyanax_mexicanus
ENSPREG00000011621	trmt12	96	49.275	ENSBTAG00000020398	TRMT12	89	49.275	Bos_taurus
ENSPREG00000011621	trmt12	96	48.184	ENSCJAG00000022174	TRMT12	92	47.458	Callithrix_jacchus
ENSPREG00000011621	trmt12	96	49.157	ENSCAFG00000001040	TRMT12	94	48.434	Canis_familiaris
ENSPREG00000011621	trmt12	96	49.157	ENSCAFG00020006500	TRMT12	94	48.434	Canis_lupus_dingo
ENSPREG00000011621	trmt12	96	48.786	ENSCHIG00000016574	TRMT12	94	48.786	Capra_hircus
ENSPREG00000011621	trmt12	96	49.392	ENSCPOG00000026520	TRMT12	93	49.392	Cavia_porcellus
ENSPREG00000011621	trmt12	96	48.910	ENSCSAG00000018615	TRMT12	92	48.910	Chlorocebus_sabaeus
ENSPREG00000011621	trmt12	99	48.506	ENSCPBG00000014290	TRMT12	95	48.506	Chrysemys_picta_bellii
ENSPREG00000011621	trmt12	72	47.423	ENSCING00000019633	-	97	47.079	Ciona_intestinalis
ENSPREG00000011621	trmt12	73	48.805	ENSCSAVG00000000415	-	91	47.931	Ciona_savignyi
ENSPREG00000011621	trmt12	96	47.146	ENSCGRG00001014834	Trmt12	95	47.132	Cricetulus_griseus_chok1gshd
ENSPREG00000011621	trmt12	99	65.037	ENSCSEG00000002675	trmt12	95	65.037	Cynoglossus_semilaevis
ENSPREG00000011621	trmt12	100	77.805	ENSCVAG00000005590	trmt12	100	77.805	Cyprinodon_variegatus
ENSPREG00000011621	trmt12	99	56.724	ENSDARG00000060338	trmt12	99	57.244	Danio_rerio
ENSPREG00000011621	trmt12	98	45.238	ENSETEG00000009373	TRMT12	92	45.894	Echinops_telfairi
ENSPREG00000011621	trmt12	96	49.395	ENSEASG00005022441	TRMT12	94	48.426	Equus_asinus_asinus
ENSPREG00000011621	trmt12	96	47.573	ENSEEUG00000004844	TRMT12	93	47.343	Erinaceus_europaeus
ENSPREG00000011621	trmt12	99	63.882	ENSELUG00000004240	trmt12	99	64.516	Esox_lucius
ENSPREG00000011621	trmt12	66	55.634	ENSFALG00000003825	TRMT12	93	63.725	Ficedula_albicollis
ENSPREG00000011621	trmt12	96	48.184	ENSFDAG00000016647	TRMT12	94	47.700	Fukomys_damarensis
ENSPREG00000011621	trmt12	94	68.966	ENSFHEG00000017338	trmt12	97	69.761	Fundulus_heteroclitus
ENSPREG00000011621	trmt12	81	55.043	ENSGALG00000006773	TRMT12	76	55.043	Gallus_gallus
ENSPREG00000011621	trmt12	100	89.526	ENSGAFG00000020056	trmt12	100	89.027	Gambusia_affinis
ENSPREG00000011621	trmt12	96	68.750	ENSGACG00000017351	trmt12	100	68.750	Gasterosteus_aculeatus
ENSPREG00000011621	trmt12	99	48.961	ENSGAGG00000006032	TRMT12	97	49.074	Gopherus_agassizii
ENSPREG00000011621	trmt12	100	74.378	ENSHBUG00000016412	trmt12	100	73.881	Haplochromis_burtoni
ENSPREG00000011621	trmt12	96	47.458	ENSHGLG00000020498	TRMT12	94	47.458	Heterocephalus_glaber_female
ENSPREG00000011621	trmt12	96	47.942	ENSHGLG00100020132	TRMT12	94	47.458	Heterocephalus_glaber_male
ENSPREG00000011621	trmt12	99	67.250	ENSHCOG00000005050	trmt12	97	70.783	Hippocampus_comes
ENSPREG00000011621	trmt12	99	54.680	ENSIPUG00000018011	trmt12	92	54.433	Ictalurus_punctatus
ENSPREG00000011621	trmt12	97	47.596	ENSSTOG00000030617	TRMT12	94	47.470	Ictidomys_tridecemlineatus
ENSPREG00000011621	trmt12	99	74.436	ENSKMAG00000000891	trmt12	99	74.436	Kryptolebias_marmoratus
ENSPREG00000011621	trmt12	99	66.420	ENSLBEG00000028712	trmt12	99	66.420	Labrus_bergylta
ENSPREG00000011621	trmt12	54	73.733	ENSLBEG00000017456	-	88	73.733	Labrus_bergylta
ENSPREG00000011621	trmt12	98	49.763	ENSLACG00000015869	TRMT12	94	49.289	Latimeria_chalumnae
ENSPREG00000011621	trmt12	99	54.791	ENSLOCG00000015290	trmt12	99	53.941	Lepisosteus_oculatus
ENSPREG00000011621	trmt12	96	48.668	ENSLAFG00000012519	TRMT12	94	48.668	Loxodonta_africana
ENSPREG00000011621	trmt12	96	48.668	ENSMMUG00000015490	TRMT12	93	48.668	Macaca_mulatta
ENSPREG00000011621	trmt12	99	71.642	ENSMAMG00000020311	trmt12	99	71.642	Mastacembelus_armatus
ENSPREG00000011621	trmt12	100	74.627	ENSMZEG00005007349	trmt12	100	74.129	Maylandia_zebra
ENSPREG00000011621	trmt12	99	48.926	ENSMGAG00000004174	TRMT12	95	48.449	Meleagris_gallopavo
ENSPREG00000011621	trmt12	99	70.075	ENSMMOG00000000412	trmt12	99	69.327	Mola_mola
ENSPREG00000011621	trmt12	97	48.889	ENSMODG00000011798	-	84	48.889	Monodelphis_domestica
ENSPREG00000011621	trmt12	96	51.372	ENSMODG00000021403	-	92	50.750	Monodelphis_domestica
ENSPREG00000011621	trmt12	100	72.906	ENSMALG00000008668	trmt12	100	72.346	Monopterus_albus
ENSPREG00000011621	trmt12	96	48.544	MGP_CAROLIEiJ_G0019820	Trmt12	93	47.700	Mus_caroli
ENSPREG00000011621	trmt12	96	48.544	ENSMUSG00000037085	Trmt12	92	48.058	Mus_musculus
ENSPREG00000011621	trmt12	96	49.757	MGP_PahariEiJ_G0019829	Trmt12	93	49.272	Mus_pahari
ENSPREG00000011621	trmt12	96	48.301	MGP_SPRETEiJ_G0020717	Trmt12	92	47.816	Mus_spretus
ENSPREG00000011621	trmt12	96	48.916	ENSMPUG00000019150	TRMT12	93	48.426	Mustela_putorius_furo
ENSPREG00000011621	trmt12	96	48.434	ENSMLUG00000003753	TRMT12	94	48.184	Myotis_lucifugus
ENSPREG00000011621	trmt12	96	47.585	ENSNGAG00000014548	Trmt12	95	47.585	Nannospalax_galili
ENSPREG00000011621	trmt12	100	74.687	ENSNBRG00000021510	trmt12	100	74.185	Neolamprologus_brichardi
ENSPREG00000011621	trmt12	99	44.340	ENSOPRG00000008067	TRMT12	95	44.208	Ochotona_princeps
ENSPREG00000011621	trmt12	96	48.668	ENSODEG00000018933	TRMT12	94	48.426	Octodon_degus
ENSPREG00000011621	trmt12	100	74.876	ENSONIG00000002614	trmt12	100	74.627	Oreochromis_niloticus
ENSPREG00000011621	trmt12	99	42.857	ENSOANG00000009987	TRMT12	98	42.857	Ornithorhynchus_anatinus
ENSPREG00000011621	trmt12	80	53.659	ENSOCUG00000026379	TRMT12	73	53.659	Oryctolagus_cuniculus
ENSPREG00000011621	trmt12	100	69.173	ENSORLG00000001280	trmt12	100	70.426	Oryzias_latipes
ENSPREG00000011621	trmt12	100	68.672	ENSORLG00020000708	trmt12	100	69.925	Oryzias_latipes_hni
ENSPREG00000011621	trmt12	100	70.175	ENSORLG00015012344	trmt12	100	69.925	Oryzias_latipes_hsok
ENSPREG00000011621	trmt12	100	69.173	ENSOMEG00000015267	trmt12	98	68.922	Oryzias_melastigma
ENSPREG00000011621	trmt12	96	48.675	ENSOGAG00000015845	TRMT12	94	48.309	Otolemur_garnettii
ENSPREG00000011621	trmt12	99	57.921	ENSPKIG00000004640	trmt12	99	58.098	Paramormyrops_kingsleyae
ENSPREG00000011621	trmt12	59	57.621	ENSPSIG00000003476	TRMT12	99	57.621	Pelodiscus_sinensis
ENSPREG00000011621	trmt12	99	61.845	ENSPMGG00000016356	trmt12	97	61.845	Periophthalmus_magnuspinnatus
ENSPREG00000011621	trmt12	96	50.623	ENSPCIG00000002967	TRMT12	85	50.623	Phascolarctos_cinereus
ENSPREG00000011621	trmt12	96	94.256	ENSPFOG00000016931	trmt12	94	94.256	Poecilia_formosa
ENSPREG00000011621	trmt12	100	93.000	ENSPLAG00000020621	trmt12	100	93.000	Poecilia_latipinna
ENSPREG00000011621	trmt12	100	95.500	ENSPMEG00000000818	trmt12	100	95.500	Poecilia_mexicana
ENSPREG00000011621	trmt12	96	48.910	ENSPPYG00000018866	TRMT12	92	48.426	Pongo_abelii
ENSPREG00000011621	trmt12	96	47.952	ENSPCAG00000000556	TRMT12	93	47.826	Procavia_capensis
ENSPREG00000011621	trmt12	96	48.668	ENSPVAG00000009149	TRMT12	93	48.668	Pteropus_vampyrus
ENSPREG00000011621	trmt12	95	74.346	ENSPNYG00000010696	trmt12	99	73.822	Pundamilia_nyererei
ENSPREG00000011621	trmt12	99	54.177	ENSPNAG00000019028	trmt12	99	53.699	Pygocentrus_nattereri
ENSPREG00000011621	trmt12	96	49.029	ENSRNOG00000008978	Trmt12	94	48.426	Rattus_norvegicus
ENSPREG00000011621	trmt12	96	48.878	ENSSHAG00000003345	TRMT12	92	49.127	Sarcophilus_harrisii
ENSPREG00000011621	trmt12	99	53.606	ENSSFOG00015006090	trmt12	99	53.125	Scleropages_formosus
ENSPREG00000011621	trmt12	99	75.500	ENSSMAG00000013247	trmt12	99	74.750	Scophthalmus_maximus
ENSPREG00000011621	trmt12	100	75.556	ENSSDUG00000006168	trmt12	100	75.309	Seriola_dumerili
ENSPREG00000011621	trmt12	100	75.556	ENSSLDG00000025007	trmt12	100	75.556	Seriola_lalandi_dorsalis
ENSPREG00000011621	trmt12	96	50.474	ENSSPUG00000005321	TRMT12	93	50.474	Sphenodon_punctatus
ENSPREG00000011621	trmt12	100	75.124	ENSSPAG00000009435	trmt12	97	74.627	Stegastes_partitus
ENSPREG00000011621	trmt12	99	47.847	ENSTGUG00000002280	TRMT12	99	48.184	Taeniopygia_guttata
ENSPREG00000011621	trmt12	99	67.164	ENSTRUG00000011548	trmt12	99	67.419	Takifugu_rubripes
ENSPREG00000011621	trmt12	99	65.594	ENSTNIG00000016866	trmt12	99	65.594	Tetraodon_nigroviridis
ENSPREG00000011621	trmt12	96	48.426	ENSUAMG00000002067	TRMT12	95	48.193	Ursus_americanus
ENSPREG00000011621	trmt12	96	48.916	ENSVPAG00000006519	TRMT12	93	48.668	Vicugna_pacos
ENSPREG00000011621	trmt12	96	47.942	ENSVVUG00000016790	TRMT12	93	47.458	Vulpes_vulpes
ENSPREG00000011621	trmt12	99	50.500	ENSXETG00000009641	trmt12	95	50.500	Xenopus_tropicalis
ENSPREG00000011621	trmt12	100	90.074	ENSXCOG00000016505	trmt12	100	90.074	Xiphophorus_couchianus
ENSPREG00000011621	trmt12	100	90.773	ENSXMAG00000025318	trmt12	100	90.773	Xiphophorus_maculatus