EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPREG00000011631 (Gene tree)
Gene ID
103467101
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
16718 bases
Position
chrLG7:8432849-8449566
Accession
103467101
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000017553CSDPF00313.224e-8015
ENSPREP00000017553CSDPF00313.224e-8025
ENSPREP00000017553CSDPF00313.224e-8035
ENSPREP00000017553CSDPF00313.224e-8045
ENSPREP00000017553CSDPF00313.224e-8055
ENSPREP00000017472CSDPF00313.221.1e-7915
ENSPREP00000017472CSDPF00313.221.1e-7925
ENSPREP00000017472CSDPF00313.221.1e-7935
ENSPREP00000017472CSDPF00313.221.1e-7945
ENSPREP00000017472CSDPF00313.221.1e-7955
ENSPREP00000017376CSDPF00313.222.3e-7915
ENSPREP00000017376CSDPF00313.222.3e-7925
ENSPREP00000017376CSDPF00313.222.3e-7935
ENSPREP00000017376CSDPF00313.222.3e-7945
ENSPREP00000017376CSDPF00313.222.3e-7955
ENSPREP00000017522CSDPF00313.221.2e-7815
ENSPREP00000017522CSDPF00313.221.2e-7825
ENSPREP00000017522CSDPF00313.221.2e-7835
ENSPREP00000017522CSDPF00313.221.2e-7845
ENSPREP00000017522CSDPF00313.221.2e-7855
ENSPREP00000017340CSDPF00313.222.2e-7815
ENSPREP00000017340CSDPF00313.222.2e-7825
ENSPREP00000017340CSDPF00313.222.2e-7835
ENSPREP00000017340CSDPF00313.222.2e-7845
ENSPREP00000017340CSDPF00313.222.2e-7855
ENSPREP00000017429CSDPF00313.222.4e-7815
ENSPREP00000017429CSDPF00313.222.4e-7825
ENSPREP00000017429CSDPF00313.222.4e-7835
ENSPREP00000017429CSDPF00313.222.4e-7845
ENSPREP00000017429CSDPF00313.222.4e-7855
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000017614-3334XM_008413175ENSPREP00000017429883 (aa)XP_008411397UPI0007E94231
ENSPRET00000017739-2187-ENSPREP00000017553728 (aa)--
ENSPRET00000017561-3520XM_008413168ENSPREP00000017376907 (aa)XP_008411390-
ENSPRET00000017524-3535XM_017305821ENSPREP00000017340912 (aa)XP_017161310-
ENSPRET00000017657-3331XM_008413176ENSPREP00000017472844 (aa)XP_008411398-
ENSPRET00000017708-3145XM_008413177ENSPREP00000017522830 (aa)XP_008411399UPI0007EBA65A
Gene Model
Click here to download ENSPREG00000011631's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011631's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000011631csde110073.950ENSG00000009307CSDE19787.879Homo_sapiens
ENSPREG00000011631csde110091.687ENSAPOG00000015538csde110091.687Acanthochromis_polyacanthus
ENSPREG00000011631csde110070.758ENSAMEG00000017129CSDE19871.581Ailuropoda_melanoleuca
ENSPREG00000011631csde18890.000ENSACIG00000015175csde110090.957Amphilophus_citrinellus
ENSPREG00000011631csde110090.964ENSAOCG00000011510csde110089.988Amphiprion_ocellaris
ENSPREG00000011631csde110091.400ENSAPEG00000007194csde110091.400Amphiprion_percula
ENSPREG00000011631csde110084.699ENSATEG00000003864csde110087.531Anabas_testudineus
ENSPREG00000011631csde110073.494ENSAPLG00000008797CSDE110075.686Anas_platyrhynchos
ENSPREG00000011631csde110076.711ENSACAG00000003120CSDE110078.889Anolis_carolinensis
ENSPREG00000011631csde110073.709ENSANAG00000024665CSDE19874.496Aotus_nancymaae
ENSPREG00000011631csde19259.144ENSANAG00000028396-9163.265Aotus_nancymaae
ENSPREG00000011631csde110088.434ENSACLG00000013296csde110091.272Astatotilapia_calliptera
ENSPREG00000011631csde110079.567ENSAMXG00000007436csde110082.090Astyanax_mexicanus
ENSPREG00000011631csde110073.589ENSBTAG00000000678CSDE110073.192Bos_taurus
ENSPREG00000011631csde110073.830ENSCJAG00000012565CSDE19874.614Callithrix_jacchus
ENSPREG00000011631csde19871.656ENSCAFG00000009618CSDE19872.539Canis_familiaris
ENSPREG00000011631csde110071.566ENSCAFG00020000481CSDE110073.724Canis_lupus_dingo
ENSPREG00000011631csde110073.709ENSCHIG00000017250CSDE110073.192Capra_hircus
ENSPREG00000011631csde110074.070ENSTSYG00000003747CSDE110076.273Carlito_syrichta
ENSPREG00000011631csde19579.141ENSCAPG00000015128CSDE110079.141Cavia_aperea
ENSPREG00000011631csde110070.000ENSCPOG00000040388CSDE110072.070Cavia_porcellus
ENSPREG00000011631csde19183.396ENSCCAG00000036794CSDE110076.025Cebus_capucinus
ENSPREG00000011631csde19653.515ENSCCAG00000030878-9153.515Cebus_capucinus
ENSPREG00000011631csde19455.206ENSCCAG00000033677-9955.206Cebus_capucinus
ENSPREG00000011631csde110073.950ENSCATG00000036962CSDE19874.733Cercocebus_atys
ENSPREG00000011631csde110074.038ENSCLAG00000006618CSDE110076.273Chinchilla_lanigera
ENSPREG00000011631csde110073.950ENSCSAG00000001658CSDE19874.733Chlorocebus_sabaeus
ENSPREG00000011631csde110082.524ENSCHOG00000000918CSDE18978.916Choloepus_hoffmanni
ENSPREG00000011631csde110076.351ENSCPBG00000016547CSDE110078.509Chrysemys_picta_bellii
ENSPREG00000011631csde19842.099ENSCING00000014465-9842.371Ciona_intestinalis
ENSPREG00000011631csde19740.785ENSCSAVG00000008100-10041.276Ciona_savignyi
ENSPREG00000011631csde19080.303ENSCANG00000031069-9380.075Colobus_angolensis_palliatus
ENSPREG00000011631csde110073.950ENSCANG00000035096CSDE19874.614Colobus_angolensis_palliatus
ENSPREG00000011631csde110058.243ENSCGRG00001014011-10059.777Cricetulus_griseus_chok1gshd
ENSPREG00000011631csde110073.469ENSCGRG00001016833-10075.528Cricetulus_griseus_chok1gshd
ENSPREG00000011631csde19770.410ENSCGRG00000002225-10070.925Cricetulus_griseus_crigri
ENSPREG00000011631csde110061.151ENSCGRG00000005831-10065.637Cricetulus_griseus_crigri
ENSPREG00000011631csde110088.313ENSCSEG00000002620csde110087.370Cynoglossus_semilaevis
ENSPREG00000011631csde110097.038ENSCVAG00000001344csde110097.038Cyprinodon_variegatus
ENSPREG00000011631csde110084.356ENSDARG00000074758csde110088.129Danio_rerio
ENSPREG00000011631csde110071.721ENSDNOG00000010287-9473.606Dasypus_novemcinctus
ENSPREG00000011631csde16048.523ENSDNOG00000034464-9960.833Dasypus_novemcinctus
ENSPREG00000011631csde110073.709ENSDORG00000011609Csde110075.871Dipodomys_ordii
ENSPREG00000011631csde19946.626FBgn0263352Unr8248.692Drosophila_melanogaster
ENSPREG00000011631csde110081.481ENSETEG00000002491-8670.605Echinops_telfairi
ENSPREG00000011631csde17552.019ENSETEG00000007109-9952.787Echinops_telfairi
ENSPREG00000011631csde19162.500ENSETEG00000006280-10064.820Echinops_telfairi
ENSPREG00000011631csde19955.783ENSETEG00000013678-9957.373Echinops_telfairi
ENSPREG00000011631csde19953.791ENSEBUG00000008647csde19954.296Eptatretus_burgeri
ENSPREG00000011631csde110074.310ENSEASG00005006284CSDE110076.522Equus_asinus_asinus
ENSPREG00000011631csde110074.310ENSECAG00000020885CSDE110076.522Equus_caballus
ENSPREG00000011631csde19371.816ENSEEUG00000006286CSDE17272.165Erinaceus_europaeus
ENSPREG00000011631csde110085.697ENSELUG00000015507csde110085.092Esox_lucius
ENSPREG00000011631csde110074.190ENSFCAG00000029266CSDE110073.724Felis_catus
ENSPREG00000011631csde110076.351ENSFALG00000003407CSDE110078.607Ficedula_albicollis
ENSPREG00000011631csde110073.469ENSFDAG00000007882CSDE110075.652Fukomys_damarensis
ENSPREG00000011631csde110095.422ENSFHEG00000010799csde110097.442Fundulus_heteroclitus
ENSPREG00000011631csde19984.096ENSGMOG00000012731csde110086.658Gadus_morhua
ENSPREG00000011631csde19876.039ENSGALG00000002139CSDE19878.354Gallus_gallus
ENSPREG00000011631csde19590.363ENSGAFG00000005241csde19594.041Gambusia_affinis
ENSPREG00000011631csde19987.575ENSGACG00000004544csde110090.512Gasterosteus_aculeatus
ENSPREG00000011631csde110076.110ENSGAGG00000017685CSDE110078.385Gopherus_agassizii
ENSPREG00000011631csde19183.396ENSGGOG00000002164CSDE110073.441Gorilla_gorilla
ENSPREG00000011631csde110092.417ENSHBUG00000020315csde110092.417Haplochromis_burtoni
ENSPREG00000011631csde19763.067ENSHGLG00000010039-10063.656Heterocephalus_glaber_female
ENSPREG00000011631csde110067.347ENSHGLG00000009620-10069.565Heterocephalus_glaber_female
ENSPREG00000011631csde110062.455ENSHGLG00000019549-10064.259Heterocephalus_glaber_female
ENSPREG00000011631csde19962.621ENSHGLG00000007471-9864.698Heterocephalus_glaber_female
ENSPREG00000011631csde19959.446ENSHGLG00000000650-9961.434Heterocephalus_glaber_female
ENSPREG00000011631csde110064.140ENSHGLG00000003829-10066.002Heterocephalus_glaber_female
ENSPREG00000011631csde19966.029ENSHGLG00000008555-9966.468Heterocephalus_glaber_female
ENSPREG00000011631csde110059.005ENSHGLG00100001846-10060.474Heterocephalus_glaber_male
ENSPREG00000011631csde110073.709ENSHGLG00100019438-10075.901Heterocephalus_glaber_male
ENSPREG00000011631csde19962.710ENSHGLG00100002245-9964.764Heterocephalus_glaber_male
ENSPREG00000011631csde19962.198ENSHGLG00100007287-9864.250Heterocephalus_glaber_male
ENSPREG00000011631csde19762.851ENSHGLG00100006910-10063.436Heterocephalus_glaber_male
ENSPREG00000011631csde19758.315ENSHGLG00100004833-10059.251Heterocephalus_glaber_male
ENSPREG00000011631csde110060.048ENSHGLG00100012072-10062.017Heterocephalus_glaber_male
ENSPREG00000011631csde19459.539ENSHGLG00100004195-10061.427Heterocephalus_glaber_male
ENSPREG00000011631csde110090.284ENSHCOG00000004158csde110090.284Hippocampus_comes
ENSPREG00000011631csde110078.606ENSIPUG00000000355csde110081.095Ictalurus_punctatus
ENSPREG00000011631csde110060.859ENSSTOG00000030994-10063.086Ictidomys_tridecemlineatus
ENSPREG00000011631csde19256.894ENSSTOG00000032722-9960.140Ictidomys_tridecemlineatus
ENSPREG00000011631csde110073.709ENSJJAG00000019571Csde110075.776Jaculus_jaculus
ENSPREG00000011631csde110089.568ENSKMAG00000005685csde110092.680Kryptolebias_marmoratus
ENSPREG00000011631csde110090.964ENSLBEG00000014770csde110090.151Labrus_bergylta
ENSPREG00000011631csde110073.634ENSLACG00000018452CSDE19973.721Latimeria_chalumnae
ENSPREG00000011631csde110082.289ENSLOCG00000010413csde110082.398Lepisosteus_oculatus
ENSPREG00000011631csde110071.325ENSLAFG00000007150CSDE19673.201Loxodonta_africana
ENSPREG00000011631csde110073.950ENSMFAG00000003674CSDE110073.441Macaca_fascicularis
ENSPREG00000011631csde110073.950ENSMMUG00000001974CSDE110073.441Macaca_mulatta
ENSPREG00000011631csde110073.950ENSMNEG00000045247CSDE19874.733Macaca_nemestrina
ENSPREG00000011631csde110073.709ENSMLEG00000038673CSDE19874.496Mandrillus_leucophaeus
ENSPREG00000011631csde110091.325ENSMAMG00000008821csde110090.498Mastacembelus_armatus
ENSPREG00000011631csde110091.621ENSMZEG00005021675csde110091.647Maylandia_zebra
ENSPREG00000011631csde19876.161ENSMGAG00000016381CSDE19878.454Meleagris_gallopavo
ENSPREG00000011631csde110073.469ENSMAUG00000014031Csde110075.528Mesocricetus_auratus
ENSPREG00000011631csde110073.950ENSMICG00000002050CSDE19874.733Microcebus_murinus
ENSPREG00000011631csde110073.469ENSMOCG00000018960Csde110075.498Microtus_ochrogaster
ENSPREG00000011631csde110085.422ENSMMOG00000015075csde110088.030Mola_mola
ENSPREG00000011631csde110075.390ENSMODG00000004685CSDE110077.640Monodelphis_domestica
ENSPREG00000011631csde110085.181ENSMALG00000007132csde110088.030Monopterus_albus
ENSPREG00000011631csde110073.589MGP_CAROLIEiJ_G0025444Csde19292.157Mus_caroli
ENSPREG00000011631csde110073.709ENSMUSG00000068823Csde19786.986Mus_musculus
ENSPREG00000011631csde110073.589MGP_PahariEiJ_G0026888Csde19292.157Mus_pahari
ENSPREG00000011631csde110073.589MGP_SPRETEiJ_G0026394Csde19292.157Mus_spretus
ENSPREG00000011631csde19874.296ENSMPUG00000005753CSDE19976.553Mustela_putorius_furo
ENSPREG00000011631csde110071.084ENSMLUG00000005681CSDE19971.698Myotis_lucifugus
ENSPREG00000011631csde110073.349ENSNGAG00000021929Csde110075.404Nannospalax_galili
ENSPREG00000011631csde19750.108ENSNGAG00000012599-10051.101Nannospalax_galili
ENSPREG00000011631csde110085.301ENSNBRG00000020808csde110087.905Neolamprologus_brichardi
ENSPREG00000011631csde19183.459ENSNLEG00000004842CSDE19874.733Nomascus_leucogenys
ENSPREG00000011631csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSPREG00000011631csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSPREG00000011631csde110073.469ENSODEG00000007383-10075.622Octodon_degus
ENSPREG00000011631csde19750.756ENSODEG00000005979-9853.196Octodon_degus
ENSPREG00000011631csde110090.602ENSONIG00000009309csde110090.361Oreochromis_niloticus
ENSPREG00000011631csde110083.051ENSOANG00000003346-8283.051Ornithorhynchus_anatinus
ENSPREG00000011631csde110073.589ENSOCUG00000016438CSDE19874.940Oryctolagus_cuniculus
ENSPREG00000011631csde110089.036ENSORLG00000000707csde110088.795Oryzias_latipes
ENSPREG00000011631csde110089.810ENSORLG00020005148csde110089.573Oryzias_latipes_hni
ENSPREG00000011631csde110089.810ENSORLG00015019415csde110089.573Oryzias_latipes_hsok
ENSPREG00000011631csde110088.981ENSOMEG00000015656csde110089.573Oryzias_melastigma
ENSPREG00000011631csde110071.480ENSOGAG00000012127CSDE19972.426Otolemur_garnettii
ENSPREG00000011631csde110071.119ENSOARG00000020034CSDE19871.990Ovis_aries
ENSPREG00000011631csde19183.396ENSPPAG00000025861CSDE110073.441Pan_paniscus
ENSPREG00000011631csde110074.190ENSPPRG00000006747CSDE19875.030Panthera_pardus
ENSPREG00000011631csde110074.190ENSPTIG00000015468CSDE110076.398Panthera_tigris_altaica
ENSPREG00000011631csde19183.396ENSPTRG00000033721CSDE110076.149Pan_troglodytes
ENSPREG00000011631csde110073.950ENSPANG00000018873CSDE110073.441Papio_anubis
ENSPREG00000011631csde110078.795ENSPKIG00000009459csde110081.047Paramormyrops_kingsleyae
ENSPREG00000011631csde19677.593ENSPSIG00000003823CSDE19680.778Pelodiscus_sinensis
ENSPREG00000011631csde110082.410ENSPMGG00000000772csde110085.162Periophthalmus_magnuspinnatus
ENSPREG00000011631csde110073.709ENSPEMG00000020357-10075.776Peromyscus_maniculatus_bairdii
ENSPREG00000011631csde110075.510ENSPCIG00000022587CSDE110077.764Phascolarctos_cinereus
ENSPREG00000011631csde19798.160ENSPFOG00000012664csde110098.765Poecilia_formosa
ENSPREG00000011631csde19591.265ENSPLAG00000017680csde19391.908Poecilia_latipinna
ENSPREG00000011631csde19591.416ENSPMEG00000005094csde19592.061Poecilia_mexicana
ENSPREG00000011631csde110073.830ENSPPYG00000000996CSDE110076.025Pongo_abelii
ENSPREG00000011631csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSPREG00000011631csde19876.287ENSPCOG00000017893CSDE110076.244Propithecus_coquereli
ENSPREG00000011631csde19170.677ENSPCOG00000008223-9270.677Propithecus_coquereli
ENSPREG00000011631csde110066.667ENSPVAG00000008225CSDE19967.500Pteropus_vampyrus
ENSPREG00000011631csde110091.456ENSPNYG00000013745csde110091.579Pundamilia_nyererei
ENSPREG00000011631csde110085.899ENSPNAG00000001958csde110086.486Pygocentrus_nattereri
ENSPREG00000011631csde110073.469ENSRNOG00000061058Csde110075.528Rattus_norvegicus
ENSPREG00000011631csde110069.305ENSRBIG00000038966-9870.131Rhinopithecus_bieti
ENSPREG00000011631csde110071.068ENSRBIG00000038088-9972.859Rhinopithecus_bieti
ENSPREG00000011631csde110073.950ENSRROG00000043101CSDE19874.733Rhinopithecus_roxellana
ENSPREG00000011631csde110073.830ENSSBOG00000035592CSDE19874.614Saimiri_boliviensis_boliviensis
ENSPREG00000011631csde110072.924ENSSHAG00000009831CSDE110075.093Sarcophilus_harrisii
ENSPREG00000011631csde110095.238ENSSFOG00015007498csde110084.060Scleropages_formosus
ENSPREG00000011631csde110090.000ENSSMAG00000007203csde110089.398Scophthalmus_maximus
ENSPREG00000011631csde110091.106ENSSDUG00000015380csde110090.214Seriola_dumerili
ENSPREG00000011631csde110092.299ENSSLDG00000008819csde110092.062Seriola_lalandi_dorsalis
ENSPREG00000011631csde110071.119ENSSARG00000000738CSDE19971.734Sorex_araneus
ENSPREG00000011631csde110076.591ENSSPUG00000008714CSDE110078.758Sphenodon_punctatus
ENSPREG00000011631csde110092.824ENSSPAG00000000716csde110092.824Stegastes_partitus
ENSPREG00000011631csde110074.310ENSSSCG00000006752CSDE19975.207Sus_scrofa
ENSPREG00000011631csde110075.569ENSTGUG00000000972CSDE110077.819Taeniopygia_guttata
ENSPREG00000011631csde110079.277ENSTRUG00000007996csde110081.920Takifugu_rubripes
ENSPREG00000011631csde18892.720ENSTNIG00000010878csde110092.720Tetraodon_nigroviridis
ENSPREG00000011631csde18981.595ENSTBEG00000011880-6475.000Tupaia_belangeri
ENSPREG00000011631csde110071.119ENSTTRG00000015583CSDE19971.633Tursiops_truncatus
ENSPREG00000011631csde19066.131ENSUAMG00000024289-9968.493Ursus_americanus
ENSPREG00000011631csde19280.707ENSUAMG00000021779-9783.168Ursus_americanus
ENSPREG00000011631csde110065.584ENSUMAG00000009720-10066.545Ursus_maritimus
ENSPREG00000011631csde19769.655ENSUMAG00000011714-9970.423Ursus_maritimus
ENSPREG00000011631csde110077.586ENSVPAG00000000749CSDE18373.709Vicugna_pacos
ENSPREG00000011631csde19172.601ENSVVUG00000009890CSDE19475.253Vulpes_vulpes
ENSPREG00000011631csde110076.608ENSXETG00000021448csde110077.076Xenopus_tropicalis
ENSPREG00000011631csde19491.503ENSXCOG00000000035csde18991.503Xiphophorus_couchianus
ENSPREG00000011631csde110098.934ENSXMAG00000009080csde110098.934Xiphophorus_maculatus

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