EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000011673 (Gene tree)
Gene ID: 103458982
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 1572 bases
Position: chrLG22:19974286-19975857
Accession: 103458982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000017276	RRM_1	PF00076.22	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000017460	-	303	XM_008400147	ENSPREP00000017276	100 (aa)	XP_008398369	UPI0004A2854A

Gene Model

Click here to download ENSPREG00000011673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000011673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000011673	slirp	79	36.620	ENSPREG00000018081	hnrnpd	55	36.620
ENSPREG00000011673	slirp	83	34.247	ENSPREG00000013528	-	64	34.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000011673	slirp	86	53.488	ENSG00000119705	SLIRP	92	61.429	Homo_sapiens
ENSPREG00000011673	slirp	99	77.778	ENSAPOG00000001298	slirp	99	77.778	Acanthochromis_polyacanthus
ENSPREG00000011673	slirp	70	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSPREG00000011673	slirp	97	75.258	ENSACIG00000023083	slirp	96	75.258	Amphilophus_citrinellus
ENSPREG00000011673	slirp	97	75.258	ENSAOCG00000006342	slirp	98	75.258	Amphiprion_ocellaris
ENSPREG00000011673	slirp	97	75.258	ENSAPEG00000015917	slirp	98	75.258	Amphiprion_percula
ENSPREG00000011673	slirp	97	75.258	ENSAPEG00000015719	-	99	75.258	Amphiprion_percula
ENSPREG00000011673	slirp	98	71.429	ENSATEG00000013525	slirp	98	71.429	Anabas_testudineus
ENSPREG00000011673	slirp	98	60.204	ENSAMXG00000018693	slirp	98	60.204	Astyanax_mexicanus
ENSPREG00000011673	slirp	88	54.545	ENSCJAG00000016946	SLIRP	81	54.545	Callithrix_jacchus
ENSPREG00000011673	slirp	91	52.688	ENSCAFG00020015876	-	84	52.688	Canis_lupus_dingo
ENSPREG00000011673	slirp	88	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSPREG00000011673	slirp	76	60.526	ENSCATG00000036327	SLIRP	72	64.179	Cercocebus_atys
ENSPREG00000011673	slirp	74	60.811	ENSCSAG00000011736	SLIRP	68	60.811	Chlorocebus_sabaeus
ENSPREG00000011673	slirp	79	58.228	ENSCPBG00000026327	SLIRP	80	58.228	Chrysemys_picta_bellii
ENSPREG00000011673	slirp	67	62.687	ENSCANG00000032892	SLIRP	70	60.870	Colobus_angolensis_palliatus
ENSPREG00000011673	slirp	99	47.059	ENSCGRG00001024068	Slirp	92	47.059	Cricetulus_griseus_chok1gshd
ENSPREG00000011673	slirp	99	47.059	ENSCGRG00000017440	Slirp	92	47.059	Cricetulus_griseus_crigri
ENSPREG00000011673	slirp	94	60.000	ENSCSEG00000015766	slirp	97	60.000	Cynoglossus_semilaevis
ENSPREG00000011673	slirp	79	87.342	ENSCVAG00000012504	slirp	78	87.342	Cyprinodon_variegatus
ENSPREG00000011673	slirp	91	75.824	ENSDARG00000097753	slirp	91	75.532	Danio_rerio
ENSPREG00000011673	slirp	74	55.405	ENSDNOG00000007721	SLIRP	67	55.405	Dasypus_novemcinctus
ENSPREG00000011673	slirp	76	53.947	ENSDORG00000012379	Slirp	68	53.947	Dipodomys_ordii
ENSPREG00000011673	slirp	89	52.809	ENSETEG00000010345	SLIRP	81	52.809	Echinops_telfairi
ENSPREG00000011673	slirp	74	58.108	ENSEASG00005020193	SLIRP	67	58.108	Equus_asinus_asinus
ENSPREG00000011673	slirp	98	48.485	ENSEEUG00000007257	SLIRP	98	48.485	Erinaceus_europaeus
ENSPREG00000011673	slirp	96	69.792	ENSELUG00000016800	slirp	95	69.792	Esox_lucius
ENSPREG00000011673	slirp	76	51.316	ENSFCAG00000036326	SLIRP	78	51.316	Felis_catus
ENSPREG00000011673	slirp	75	61.333	ENSFALG00000012583	SLIRP	85	54.444	Ficedula_albicollis
ENSPREG00000011673	slirp	74	54.054	ENSFDAG00000008347	SLIRP	65	54.054	Fukomys_damarensis
ENSPREG00000011673	slirp	77	84.416	ENSFHEG00000004709	slirp	84	84.416	Fundulus_heteroclitus
ENSPREG00000011673	slirp	97	69.072	ENSGMOG00000016948	slirp	93	69.072	Gadus_morhua
ENSPREG00000011673	slirp	89	57.303	ENSGALG00000031238	SLIRP	86	57.303	Gallus_gallus
ENSPREG00000011673	slirp	99	89.899	ENSGAFG00000010998	slirp	99	89.899	Gambusia_affinis
ENSPREG00000011673	slirp	79	81.013	ENSGACG00000020137	slirp	92	81.013	Gasterosteus_aculeatus
ENSPREG00000011673	slirp	93	59.574	ENSGAGG00000009953	SLIRP	65	59.574	Gopherus_agassizii
ENSPREG00000011673	slirp	77	59.740	ENSGGOG00000011059	-	73	61.765	Gorilla_gorilla
ENSPREG00000011673	slirp	71	52.113	ENSHGLG00000018491	SLIRP	64	52.113	Heterocephalus_glaber_female
ENSPREG00000011673	slirp	71	52.113	ENSHGLG00100014153	SLIRP	64	52.113	Heterocephalus_glaber_male
ENSPREG00000011673	slirp	96	77.083	ENSHCOG00000006795	slirp	97	77.083	Hippocampus_comes
ENSPREG00000011673	slirp	98	72.449	ENSIPUG00000010214	SLIRP	98	72.449	Ictalurus_punctatus
ENSPREG00000011673	slirp	76	53.947	ENSSTOG00000034316	SLIRP	68	53.947	Ictidomys_tridecemlineatus
ENSPREG00000011673	slirp	98	71.429	ENSKMAG00000002038	slirp	94	71.429	Kryptolebias_marmoratus
ENSPREG00000011673	slirp	99	72.727	ENSLBEG00000007564	slirp	99	72.727	Labrus_bergylta
ENSPREG00000011673	slirp	96	68.750	ENSLACG00000013434	SLIRP	92	68.750	Latimeria_chalumnae
ENSPREG00000011673	slirp	76	60.256	ENSMFAG00000042960	SLIRP	73	63.235	Macaca_fascicularis
ENSPREG00000011673	slirp	84	58.333	ENSMMUG00000029256	SLIRP	72	64.179	Macaca_mulatta
ENSPREG00000011673	slirp	76	60.256	ENSMNEG00000028921	SLIRP	73	63.235	Macaca_nemestrina
ENSPREG00000011673	slirp	74	60.811	ENSMLEG00000043644	SLIRP	70	62.319	Mandrillus_leucophaeus
ENSPREG00000011673	slirp	97	78.351	ENSMZEG00005004617	slirp	98	78.351	Maylandia_zebra
ENSPREG00000011673	slirp	89	50.549	ENSMAUG00000003857	Slirp	82	50.549	Mesocricetus_auratus
ENSPREG00000011673	slirp	88	44.944	ENSMICG00000012080	SLIRP	64	63.768	Microcebus_murinus
ENSPREG00000011673	slirp	72	55.556	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSPREG00000011673	slirp	99	73.737	ENSMMOG00000018268	slirp	99	73.737	Mola_mola
ENSPREG00000011673	slirp	69	55.072	ENSMODG00000005207	-	97	55.072	Monodelphis_domestica
ENSPREG00000011673	slirp	98	74.490	ENSMALG00000012581	slirp	100	74.490	Monopterus_albus
ENSPREG00000011673	slirp	85	53.684	MGP_CAROLIEiJ_G0017995	Slirp	88	53.684	Mus_caroli
ENSPREG00000011673	slirp	85	53.684	ENSMUSG00000021040	Slirp	92	52.747	Mus_musculus
ENSPREG00000011673	slirp	85	53.684	MGP_SPRETEiJ_G0018840	Slirp	85	53.684	Mus_spretus
ENSPREG00000011673	slirp	84	52.381	ENSMLUG00000029544	-	74	52.381	Myotis_lucifugus
ENSPREG00000011673	slirp	73	56.164	ENSMLUG00000024998	-	74	52.381	Myotis_lucifugus
ENSPREG00000011673	slirp	75	52.000	ENSNGAG00000016363	Slirp	72	52.000	Nannospalax_galili
ENSPREG00000011673	slirp	89	49.438	ENSNLEG00000032459	-	82	49.438	Nomascus_leucogenys
ENSPREG00000011673	slirp	89	49.438	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSPREG00000011673	slirp	76	57.895	ENSODEG00000012580	SLIRP	76	57.143	Octodon_degus
ENSPREG00000011673	slirp	97	77.320	ENSONIG00000011692	slirp	98	77.320	Oreochromis_niloticus
ENSPREG00000011673	slirp	89	54.945	ENSOANG00000022366	SLIRP	82	54.945	Ornithorhynchus_anatinus
ENSPREG00000011673	slirp	99	73.737	ENSORLG00000010761	slirp	77	73.737	Oryzias_latipes
ENSPREG00000011673	slirp	99	72.727	ENSORLG00020022188	slirp	99	72.727	Oryzias_latipes_hni
ENSPREG00000011673	slirp	98	73.469	ENSORLG00015020171	slirp	97	73.469	Oryzias_latipes_hsok
ENSPREG00000011673	slirp	99	74.747	ENSOMEG00000019321	slirp	99	74.747	Oryzias_melastigma
ENSPREG00000011673	slirp	86	55.814	ENSPPAG00000040710	-	73	61.765	Pan_paniscus
ENSPREG00000011673	slirp	70	54.286	ENSPPRG00000014350	SLIRP	71	54.286	Panthera_pardus
ENSPREG00000011673	slirp	70	54.286	ENSPTIG00000014196	SLIRP	71	54.286	Panthera_tigris_altaica
ENSPREG00000011673	slirp	76	60.526	ENSPTRG00000030691	SLIRP	73	61.765	Pan_troglodytes
ENSPREG00000011673	slirp	76	61.538	ENSPANG00000026323	SLIRP	72	64.179	Papio_anubis
ENSPREG00000011673	slirp	66	74.242	ENSPKIG00000008831	slirp	65	74.242	Paramormyrops_kingsleyae
ENSPREG00000011673	slirp	79	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSPREG00000011673	slirp	72	55.556	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSPREG00000011673	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSPREG00000011673	slirp	78	50.000	ENSPCIG00000026842	-	84	50.000	Phascolarctos_cinereus
ENSPREG00000011673	slirp	100	99.000	ENSPFOG00000006758	slirp	100	99.000	Poecilia_formosa
ENSPREG00000011673	slirp	100	99.000	ENSPLAG00000011140	slirp	100	99.000	Poecilia_latipinna
ENSPREG00000011673	slirp	100	99.000	ENSPMEG00000019535	slirp	100	99.000	Poecilia_mexicana
ENSPREG00000011673	slirp	74	59.459	ENSPPYG00000006030	SLIRP	69	58.667	Pongo_abelii
ENSPREG00000011673	slirp	77	58.442	ENSPCOG00000015159	SLIRP	64	61.765	Propithecus_coquereli
ENSPREG00000011673	slirp	96	71.875	ENSPNAG00000008633	slirp	97	71.875	Pygocentrus_nattereri
ENSPREG00000011673	slirp	67	62.687	ENSRBIG00000032998	-	62	62.687	Rhinopithecus_bieti
ENSPREG00000011673	slirp	65	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSPREG00000011673	slirp	88	56.818	ENSRBIG00000032222	-	81	56.818	Rhinopithecus_bieti
ENSPREG00000011673	slirp	74	55.405	ENSRBIG00000035817	-	68	55.405	Rhinopithecus_bieti
ENSPREG00000011673	slirp	88	56.818	ENSRROG00000036656	-	81	56.818	Rhinopithecus_roxellana
ENSPREG00000011673	slirp	71	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSPREG00000011673	slirp	67	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSPREG00000011673	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSPREG00000011673	slirp	70	58.571	ENSSBOG00000020014	SLIRP	73	60.294	Saimiri_boliviensis_boliviensis
ENSPREG00000011673	slirp	87	68.966	ENSSFOG00015011165	slirp	88	68.966	Scleropages_formosus
ENSPREG00000011673	slirp	96	56.122	ENSSMAG00000012930	slirp	96	56.122	Scophthalmus_maximus
ENSPREG00000011673	slirp	98	77.551	ENSSDUG00000021883	slirp	64	77.551	Seriola_dumerili
ENSPREG00000011673	slirp	98	77.551	ENSSLDG00000023136	slirp	89	77.551	Seriola_lalandi_dorsalis
ENSPREG00000011673	slirp	91	59.794	ENSSPUG00000009346	SLIRP	99	59.794	Sphenodon_punctatus
ENSPREG00000011673	slirp	99	67.677	ENSSPAG00000013477	slirp	99	67.677	Stegastes_partitus
ENSPREG00000011673	slirp	99	45.946	ENSSSCG00000028167	SLIRP	100	45.946	Sus_scrofa
ENSPREG00000011673	slirp	78	57.692	ENSTGUG00000012337	SLIRP	83	53.409	Taeniopygia_guttata
ENSPREG00000011673	slirp	98	67.677	ENSTRUG00000020127	slirp	98	67.677	Takifugu_rubripes
ENSPREG00000011673	slirp	88	57.143	ENSUAMG00000022445	SLIRP	81	57.143	Ursus_americanus
ENSPREG00000011673	slirp	88	56.044	ENSUMAG00000007166	SLIRP	81	56.044	Ursus_maritimus
ENSPREG00000011673	slirp	86	49.425	ENSVPAG00000001781	SLIRP	81	49.425	Vicugna_pacos
ENSPREG00000011673	slirp	77	58.442	ENSVVUG00000004436	SLIRP	68	58.442	Vulpes_vulpes
ENSPREG00000011673	slirp	81	67.901	ENSXETG00000030343	SLIRP	91	67.901	Xenopus_tropicalis
ENSPREG00000011673	slirp	99	90.909	ENSXCOG00000009422	slirp	99	90.909	Xiphophorus_couchianus
ENSPREG00000011673	slirp	99	92.929	ENSXMAG00000015655	slirp	99	92.929	Xiphophorus_maculatus